FFCP PHASE1:Hg19::chrX:106171296..106171331,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9075 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2041 | |||
|TSSclassifier=strong | |||
|UniProt=P57739 | |||
|association_with_transcript=-6bp_to_AY358474,BC014424_5end | |||
|cluster_id=chrX:106171296..106171331,+ | |||
|description=CAGE_peak_1_at_CLDN2_5end | |||
|id=chrX:106171296..106171331,+ | |||
|ontology_enrichment_celltype=CL:1000497!3.00e-12!18;CL:0002518!3.00e-12!18;CL:1000507!3.91e-12!12;CL:1000494!3.91e-12!12;CL:1000449!3.94e-11!16;CL:0000181!2.57e-10!12;CL:0000417!2.57e-10!12;CL:0000668!2.57e-10!12;CL:0000414!2.57e-10!12;CL:0000412!2.57e-10!12;CL:0000182!2.57e-10!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.31e-16;12!CL:0000650;4.34e-09;2!CL:1000500;4.34e-09;2!CL:1000618;4.34e-09;2!CL:1001318;4.34e-09;2!CL:0002173;4.34e-09;2!CL:1000497;4.26e-08;17!CL:0002518;4.26e-08;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.19e-16,12;CL:0000223,3.73e-09,58;CL:0000650,4.92e-09,2;CL:1000500,4.92e-09,2;CL:1000618,4.92e-09,2;CL:1001318,4.92e-09,2;CL:0002173,4.92e-09,2;CL:1000497,4.37e-08,17;CL:0002518,4.37e-08,17 | |||
|ontology_enrichment_development_v019=UBERON:0009497;9.28e-24;13!UBERON:0004161;1.83e-17;11!UBERON:0003104;9.74e-17;31!UBERON:0007297;1.02e-09;2!UBERON:0001041;2.47e-09;30!UBERON:0003918;2.71e-07;10!UBERON:0007687;2.71e-07;10 | |||
|ontology_enrichment_disease=DOID:299!5.28e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:299;2.98e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:299,3.00e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0005172!7.55e-24!55;UBERON:0005173!7.55e-24!55;UBERON:0002417!8.41e-21!61;UBERON:0000916!8.41e-21!61;UBERON:0009854!1.89e-19!23;UBERON:0000058!8.15e-19!26;UBERON:0009497!6.26e-18!25;UBERON:0000015!6.26e-18!25;UBERON:0002423!6.26e-18!25;UBERON:0006235!6.26e-18!25;UBERON:0004161!6.26e-18!25;UBERON:0008835!1.10e-17!22;UBERON:0003894!1.10e-17!22;UBERON:0009856!8.72e-17!26;UBERON:0002113!6.06e-16!27;UBERON:0003918!6.06e-16!27;UBERON:0005095!6.06e-16!27;UBERON:0007687!6.06e-16!27;UBERON:0004921!3.39e-15!129;UBERON:0004185!3.39e-15!129;UBERON:0007499!3.60e-15!25;UBERON:0000080!4.79e-15!18;UBERON:0002120!4.79e-15!18;UBERON:0004875!4.79e-15!18;UBERON:0005721!4.79e-15!18;UBERON:0005754!4.79e-15!18;UBERON:0007297!4.79e-15!18;UBERON:0000489!5.67e-15!32;UBERON:0005177!2.21e-14!107;UBERON:0000466!1.03e-13!126;UBERON:0004876!2.72e-13!20;UBERON:0006554!3.94e-13!44;UBERON:0006555!4.92e-13!17;UBERON:0005103!4.92e-13!17;UBERON:0000083!4.92e-13!17;UBERON:0009201!4.92e-13!17;UBERON:0004819!4.92e-13!17;UBERON:0006553!4.92e-13!17;UBERON:0003074!4.92e-13!17;UBERON:0003060!4.92e-13!17;UBERON:0003929!7.23e-13!54;UBERON:0001008!9.66e-13!45;UBERON:0003104!1.11e-12!238;UBERON:0009142!1.11e-12!238;UBERON:0003887!1.53e-12!21;UBERON:0002107!1.96e-12!19;UBERON:0006925!1.96e-12!19;UBERON:0008836!1.96e-12!19;UBERON:0001007!3.72e-12!155;UBERON:0001555!3.72e-12!155;UBERON:0007026!3.72e-12!155;UBERON:0009773!3.91e-12!12;UBERON:0001231!3.91e-12!12;UBERON:0004810!3.91e-12!12;UBERON:0000481!1.55e-11!347;UBERON:0004119!3.47e-11!169;UBERON:0000925!3.47e-11!169;UBERON:0006595!3.47e-11!169;UBERON:0004211!3.94e-11!16;UBERON:0001285!3.94e-11!16;UBERON:0007684!3.94e-11!16;UBERON:0003220!3.94e-11!16;UBERON:0004208!3.94e-11!16;UBERON:0005409!4.66e-11!35;UBERON:0000077!8.93e-11!130;UBERON:0003064!1.94e-10!37;UBERON:0005057!3.82e-10!26;UBERON:0005256!4.48e-10!143;UBERON:0009569!5.16e-10!113;UBERON:0003914!9.77e-10!118;UBERON:0006947!1.71e-09!3;UBERON:0004054!1.71e-09!3;UBERON:0000160!2.70e-09!27;UBERON:0001041!8.11e-09!98;UBERON:0003886!9.84e-09!63;UBERON:0002100!2.57e-08!216;UBERON:0005911!7.53e-08!82;UBERON:0003103!1.21e-07!69;UBERON:0000062!1.45e-07!511;UBERON:0002553!1.93e-07!70;UBERON:0005904!3.46e-07!4;UBERON:0000949!4.36e-07!45;UBERON:0002368!6.39e-07!35;UBERON:0002365!8.64e-07!31;UBERON:0002330!8.64e-07!31 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;6.27e-25;25!UBERON:0002107;9.08e-20;19!UBERON:0006925;9.08e-20;19!UBERON:0005172;2.25e-15;52!UBERON:0005173;2.25e-15;52!UBERON:0006947;5.83e-14;3!UBERON:0004054;5.83e-14;3!UBERON:0002365;3.76e-11;31!UBERON:0002330;3.76e-11;31!UBERON:0002417;5.03e-11;58!UBERON:0000916;5.03e-11;58!UBERON:0005904;1.40e-10;4!UBERON:0000160;1.74e-10;17!UBERON:0000058;2.37e-10;10!UBERON:0005409;2.76e-10;22!UBERON:0000489;5.01e-10;29!UBERON:0002113;6.67e-10;24!UBERON:0011143;6.67e-10;24!UBERON:0002368;8.08e-10;33!UBERON:0006554;1.22e-09;30!UBERON:0001008;1.22e-09;30!UBERON:0003567;4.34e-09;2!UBERON:0003838;4.34e-09;2!UBERON:0003586;4.34e-09;2!UBERON:0005169;4.34e-09;2!UBERON:0002321;4.34e-09;2!UBERON:0005215;4.34e-09;2!UBERON:0002303;4.34e-09;2!UBERON:0002319;4.34e-09;2!UBERON:0000949;6.67e-09;43!UBERON:0002108;1.45e-08;4!UBERON:0001007;2.26e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,5.70e-29,54;UBERON:0005173,5.70e-29,54;UBERON:0002417,1.48e-25,60;UBERON:0000916,1.48e-25,60;UBERON:0009497,5.71e-25,25;UBERON:0000015,5.71e-25,25;UBERON:0002423,5.71e-25,25;UBERON:0006235,5.71e-25,25;UBERON:0004161,5.71e-25,25;UBERON:0008835,3.54e-24,22;UBERON:0003894,3.54e-24,22;UBERON:0009854,5.15e-23,23;UBERON:0007499,5.74e-21,25;UBERON:0009856,4.61e-20,26;UBERON:0002107,8.62e-20,19;UBERON:0006925,8.62e-20,19;UBERON:0008836,8.62e-20,19;UBERON:0005177,1.05e-19,101;UBERON:0003929,7.15e-18,54;UBERON:0002113,2.87e-14,26;UBERON:0003918,2.87e-14,26;UBERON:0011143,2.87e-14,26;UBERON:0005095,2.87e-14,26;UBERON:0007687,2.87e-14,26;UBERON:0000489,4.34e-14,31;UBERON:0004921,4.66e-14,118;UBERON:0006947,5.96e-14,3;UBERON:0004054,5.96e-14,3;UBERON:0009569,1.01e-12,112;UBERON:0000058,1.17e-12,19;UBERON:0003104,2.38e-12,160;UBERON:0009142,2.38e-12,160;UBERON:0006554,3.84e-12,47;UBERON:0005911,6.09e-12,82;UBERON:0001008,7.86e-12,48;UBERON:0001007,1.25e-11,145;UBERON:0001555,1.25e-11,145;UBERON:0007026,1.25e-11,145;UBERON:0002365,2.21e-11,31;UBERON:0002330,2.21e-11,31;UBERON:0000080,2.62e-11,9;UBERON:0002120,2.62e-11,9;UBERON:0004875,2.62e-11,9;UBERON:0005721,2.62e-11,9;UBERON:0005754,2.62e-11,9;UBERON:0007297,2.62e-11,9;UBERON:0002100,1.16e-10,199;UBERON:0000949,1.20e-10,45;UBERON:0005904,1.43e-10,4;UBERON:0000160,1.80e-10,17;UBERON:0004119,5.14e-10,160;UBERON:0000925,5.14e-10,160;UBERON:0006595,5.14e-10,160;UBERON:0002368,7.28e-10,35;UBERON:0005256,8.07e-10,122;UBERON:0004876,3.37e-09,11;UBERON:0003567,4.92e-09,2;UBERON:0003838,4.92e-09,2;UBERON:0003586,4.92e-09,2;UBERON:0005169,4.92e-09,2;UBERON:0002321,4.92e-09,2;UBERON:0005215,4.92e-09,2;UBERON:0002303,4.92e-09,2;UBERON:0002319,4.92e-09,2;UBERON:0002530,5.07e-09,59;UBERON:0005409,5.96e-09,25;UBERON:0002108,1.44e-08,4;UBERON:0006555,1.44e-08,16;UBERON:0004819,1.44e-08,16;UBERON:0003887,2.08e-08,12;UBERON:0005103,2.61e-08,8;UBERON:0000083,2.61e-08,8;UBERON:0009201,2.61e-08,8;UBERON:0006553,2.61e-08,8;UBERON:0003074,2.61e-08,8;UBERON:0003060,2.61e-08,8;UBERON:0003914,3.78e-08,117;UBERON:0003064,3.83e-08,28 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0.665188192387692,0.966182642624386,53.308483727569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0.134831308160164,0,0,0,0,5.3504621473082,0,16.478154526838,56.0211513506247,17.7236972004421,0,5.16551441881077,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2399288120209,0,0,0,0,0,0,0.0770153371044148,0.784349769176855,13.1525302187935,2.53323909342902,0,0,2.80690690932781,0,15.9858398150873,2.00675909541941,0.254876273045038,0,0.223874754722178,0,0,0,0,0,7.418952838636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.563391205064483,0,0,0,0,0,0,0,0,0,0,0,7.62564786291911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30423242938906,0,0,0,0,0,0.890894042497916,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,4.40354920621902,1.61119057208048,0,3.35387579165574,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.099830954822,2.26164914294305,0,0,1.23840590304675,18.9419344929424,0,0,0,0.202203398942031,0,0,0,0,0,139.682878608684,26.6179575307061,0,0,0,0,0,0,0,0,82.2521588026101,0,0,0,0,18.1715734971711,0,0,0,0,0,0,0,0,0,0,0,0,121.027848017213,0,2.88180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20592910460226,2.88455504334083,3.84200199968854,17.3232367465958,0,0,0,0,0,0,0,0,0,0,104.417562171438,67.9811462229575,0,0,0,0,0,0,0,0,0,0,0,0,0,70.9312811001919,1.32506888912221,0,0,25.4919388447651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591420599958536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,13.0683174479853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,7.81514011233093,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,12.0094432061286,0,0,0,70.1764671460519,0,0,0,0,0,0,0,0,0,0,0,0,55.0403165248208,0,0,0,0,0.294450700845729,158.49330247695,0,0.102662806856247,0,0,0,0,0,0,0,0,27.4740002864283,93.7620514561977,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,56.6058719351479,0,0,0,0,0,0.126698501011437,0,0,0,0,2.72803313585662,0.267964130156178,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.286888821570705,0,0,0,0,15.7194103686527,0,0,0,0,0,0 | |||
|short_description=p1@CLDN2 | |||
}} |
Latest revision as of 22:20, 18 September 2015
Short description: | p1@CLDN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CLDN2_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_AY358474, BC014424_5end |
EntrezGene: | CLDN2 |
HGNC: | 2041 |
UniProt: | P57739 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.19e-16 | 12 |
endodermal cell | 3.73e-09 | 58 |
mesangial cell | 4.92e-09 | 2 |
kidney interstitial cell | 4.92e-09 | 2 |
juxtaglomerular complex cell | 4.92e-09 | 2 |
renal interstitial pericyte | 4.92e-09 | 2 |
extraglomerular mesangial cell | 4.92e-09 | 2 |
kidney cell | 4.37e-08 | 17 |
kidney epithelial cell | 4.37e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 3.00e-07 | 25 |