FFCP PHASE1:Mm9::chr7:52650552..52650573,-: Difference between revisions
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{{FFCP|EntrezGene=20637|HGNC=|MCL_coexpression_id=0|UniProt=Q7TT81|association_with_transcript=-367bp_to_uc009guy.1_5end|description=CAGE_peak_3_at_Snrnp70_5end|id=chr7:52650552..52650573,-|ontology_enrichment_celltype=CL:0000540!1.18e-09!33;CL:0000047!1.18e-09!33;CL:0000031!1.18e-09!33;CL:0000404!1.18e-09!33;CL:0000393!1.95e-09!39;CL:0000211!1.95e-09!39;CL:0002319!1.27e-08!43;CL:0000117!1.46e-08!23;CL:0000337!1.46e-08!23;CL:0000221!1.69e-08!44;CL:0000133!1.69e-08!44;CL:0000055!4.36e-08!50|ontology_enrichment_celltype_v019_2=CL:0000540,2.62e-10,33;CL:0000047,2.62e-10,33;CL:0000031,2.62e-10,33;CL:0000404,2.62e-10,33;CL:0000117,6.99e-10,23;CL:0000337,6.99e-10,23;CL:0002319,1.07e-09,43;CL:0000221,2.49e-09,44;CL:0000133,2.49e-09,44;CL:0000393,1.02e-08,39;CL:0000211,1.02e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.03e-25!73;UBERON:0005743!2.03e-25!73;UBERON:0000073!5.33e-24!75;UBERON:0001016!5.33e-24!75;UBERON:0001049!1.20e-21!52;UBERON:0005068!1.20e-21!52;UBERON:0006241!1.20e-21!52;UBERON:0007135!1.20e-21!52;UBERON:0002346!1.97e-19!71;UBERON:0003075!1.97e-19!71;UBERON:0007284!1.97e-19!71;UBERON:0000955!1.24e-18!50;UBERON:0006238!1.24e-18!50;UBERON:0002616!3.33e-18!49;UBERON:0004121!5.19e-17!102;UBERON:0000924!5.19e-17!102;UBERON:0006601!5.19e-17!102;UBERON:0003080!5.64e-17!40;UBERON:0002780!2.11e-16!39;UBERON:0001890!2.11e-16!39;UBERON:0006240!2.11e-16!39;UBERON:0000033!4.79e-15!63;UBERON:0003056!5.90e-15!49;UBERON:0002020!2.10e-14!34;UBERON:0002791!1.36e-11!29;UBERON:0003528!1.36e-11!29;UBERON:0001893!1.36e-11!29;UBERON:0000956!1.57e-08!21;UBERON:0001869!1.57e-08!21;UBERON:0000203!1.57e-08!21;UBERON:0002619!1.62e-07!17;UBERON:0002021!5.61e-07!10;UBERON:0000411!5.61e-07!10;UBERON:0001950!5.61e-07!10;UBERON:0007811!8.25e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.84e-34,73;UBERON:0001016,1.43e-32,75;UBERON:0000073,3.33e-28,54;UBERON:0001049,6.81e-28,52;UBERON:0005068,6.81e-28,52;UBERON:0006241,6.81e-28,52;UBERON:0007135,6.81e-28,52;UBERON:0002346,4.11e-24,64;UBERON:0003075,4.11e-24,64;UBERON:0007284,4.11e-24,64;UBERON:0004121,1.85e-22,95;UBERON:0000924,1.85e-22,95;UBERON:0006601,1.85e-22,95;UBERON:0000955,1.91e-22,47;UBERON:0006238,1.91e-22,47;UBERON:0002616,1.09e-21,46;UBERON:0003080,5.10e-21,40;UBERON:0002780,5.09e-20,39;UBERON:0001890,5.09e-20,39;UBERON:0006240,5.09e-20,39;UBERON:0010371,1.49e-19,73;UBERON:0002020,5.99e-17,34;UBERON:0003056,1.97e-15,49;UBERON:0010314,1.21e-14,92;UBERON:0003528,3.40e-12,29;UBERON:0002791,3.40e-12,29;UBERON:0001893,3.40e-12,29;UBERON:0002021,4.91e-12,10;UBERON:0000411,4.91e-12,10;UBERON:0001950,4.91e-12,10;UBERON:0001894,2.39e-09,10;UBERON:0006222,2.39e-09,10;UBERON:0000956,1.27e-08,21;UBERON:0001869,1.27e-08,21;UBERON:0000203,1.27e-08,21;UBERON:0000025,3.31e-08,114;UBERON:0004111,3.63e-08,122;UBERON:0002240,1.15e-07,6;UBERON:0005174,1.15e-07,6;UBERON:0001137,1.15e-07,6;UBERON:0003076,2.52e-07,12;UBERON:0003057,2.52e-07,12;UBERON:0002619,2.94e-07,17;UBERON:0000007,4.67e-07,8;UBERON:0003296,4.67e-07,8;UBERON:0010133,4.67e-07,8;UBERON:0001948,9.45e-07,5;UBERON:0002315,9.45e-07,5|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0.422366166455,0,0.171217968225505,0.159544317990673,0.171200729931206,0.174840804837995,0,0.202475267389826,0,0,0.274228867211478,0,11.3958008802433,0.893618560807968,0.261199789138935,0,0.22940928106717,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,0.418531630736908,0.7813353445238,0.523523743973798,0,1.36609096991689,0,0.881277725829041,0.304130793658544,1.10128051297009,3.9119567217402,0,0.878744730937887,0.194429899074283,0.419959264876088,0,0,0,0,0.514518872071894,0,0.515672092277442,1.21389876515759,3.1739458756322,1.26766280701236,0.338844532069132,0,1.7997994345628,1.97773272513395,0,1.49800055259202,2.68952813725088,1.03689612308478,1.21505344498522,0.420649922702764,2.85650984403804,3.53389665522582,0.61245399607477,0.766763768145891,0.919218786610021,0,2.042997409363,1.99688493233117,1.84640802822271,2.10421580285542,0.52091337055676,0.837548997004143,1.68828783009504,2.44477196442896,3.53554302568401,1.42371680799103,1.67759501242771,0.151452386666368,0,0.289864488701678,0,0,0,0,0,1.68533304158102,0.340860645156116,0.259786004602869,0,0.281686839553361,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,1.02765491747154,0,0.445326417194474,0,0.913396434936424,0,0.301445281105245,0.940709657085638,0.251333182659351,0,0,0,0,0,0.969750506270444,0,0.878342391034642,1.04723353406728,0.510914110417183,0.11981512450592,0,0,2.09706895166752,1.83000241127451,1.13088916901578,1.91206752211504,1.53429274398198,3.1168206683934,3.0825839982874,0.101839363850316,0.124406970610093,0.252722758433675,0.420883711772948,0.390361328888111,0.459804208866946,0.540186389416048,0.452114453507145,0.204109497453984,0,0.374806898238915,0.258703370739016,0.215567992932842,0.189106080167819,0.175951124163949,0.657587197282725,0.556094498451196,0.696504333044333,0.617346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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20637 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q7TT81 | |||
|association_with_transcript=-367bp_to_uc009guy.1_5end | |||
|cluster_id=chr7:52650552..52650573,- | |||
|description=CAGE_peak_3_at_Snrnp70_5end | |||
|id=chr7:52650552..52650573,- | |||
|ontology_enrichment_celltype=CL:0000540!1.18e-09!33;CL:0000047!1.18e-09!33;CL:0000031!1.18e-09!33;CL:0000404!1.18e-09!33;CL:0000393!1.95e-09!39;CL:0000211!1.95e-09!39;CL:0002319!1.27e-08!43;CL:0000117!1.46e-08!23;CL:0000337!1.46e-08!23;CL:0000221!1.69e-08!44;CL:0000133!1.69e-08!44;CL:0000055!4.36e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.62e-10,33;CL:0000047,2.62e-10,33;CL:0000031,2.62e-10,33;CL:0000404,2.62e-10,33;CL:0000117,6.99e-10,23;CL:0000337,6.99e-10,23;CL:0002319,1.07e-09,43;CL:0000221,2.49e-09,44;CL:0000133,2.49e-09,44;CL:0000393,1.02e-08,39;CL:0000211,1.02e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.03e-25!73;UBERON:0005743!2.03e-25!73;UBERON:0000073!5.33e-24!75;UBERON:0001016!5.33e-24!75;UBERON:0001049!1.20e-21!52;UBERON:0005068!1.20e-21!52;UBERON:0006241!1.20e-21!52;UBERON:0007135!1.20e-21!52;UBERON:0002346!1.97e-19!71;UBERON:0003075!1.97e-19!71;UBERON:0007284!1.97e-19!71;UBERON:0000955!1.24e-18!50;UBERON:0006238!1.24e-18!50;UBERON:0002616!3.33e-18!49;UBERON:0004121!5.19e-17!102;UBERON:0000924!5.19e-17!102;UBERON:0006601!5.19e-17!102;UBERON:0003080!5.64e-17!40;UBERON:0002780!2.11e-16!39;UBERON:0001890!2.11e-16!39;UBERON:0006240!2.11e-16!39;UBERON:0000033!4.79e-15!63;UBERON:0003056!5.90e-15!49;UBERON:0002020!2.10e-14!34;UBERON:0002791!1.36e-11!29;UBERON:0003528!1.36e-11!29;UBERON:0001893!1.36e-11!29;UBERON:0000956!1.57e-08!21;UBERON:0001869!1.57e-08!21;UBERON:0000203!1.57e-08!21;UBERON:0002619!1.62e-07!17;UBERON:0002021!5.61e-07!10;UBERON:0000411!5.61e-07!10;UBERON:0001950!5.61e-07!10;UBERON:0007811!8.25e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.84e-34,73;UBERON:0001016,1.43e-32,75;UBERON:0000073,3.33e-28,54;UBERON:0001049,6.81e-28,52;UBERON:0005068,6.81e-28,52;UBERON:0006241,6.81e-28,52;UBERON:0007135,6.81e-28,52;UBERON:0002346,4.11e-24,64;UBERON:0003075,4.11e-24,64;UBERON:0007284,4.11e-24,64;UBERON:0004121,1.85e-22,95;UBERON:0000924,1.85e-22,95;UBERON:0006601,1.85e-22,95;UBERON:0000955,1.91e-22,47;UBERON:0006238,1.91e-22,47;UBERON:0002616,1.09e-21,46;UBERON:0003080,5.10e-21,40;UBERON:0002780,5.09e-20,39;UBERON:0001890,5.09e-20,39;UBERON:0006240,5.09e-20,39;UBERON:0010371,1.49e-19,73;UBERON:0002020,5.99e-17,34;UBERON:0003056,1.97e-15,49;UBERON:0010314,1.21e-14,92;UBERON:0003528,3.40e-12,29;UBERON:0002791,3.40e-12,29;UBERON:0001893,3.40e-12,29;UBERON:0002021,4.91e-12,10;UBERON:0000411,4.91e-12,10;UBERON:0001950,4.91e-12,10;UBERON:0001894,2.39e-09,10;UBERON:0006222,2.39e-09,10;UBERON:0000956,1.27e-08,21;UBERON:0001869,1.27e-08,21;UBERON:0000203,1.27e-08,21;UBERON:0000025,3.31e-08,114;UBERON:0004111,3.63e-08,122;UBERON:0002240,1.15e-07,6;UBERON:0005174,1.15e-07,6;UBERON:0001137,1.15e-07,6;UBERON:0003076,2.52e-07,12;UBERON:0003057,2.52e-07,12;UBERON:0002619,2.94e-07,17;UBERON:0000007,4.67e-07,8;UBERON:0003296,4.67e-07,8;UBERON:0010133,4.67e-07,8;UBERON:0001948,9.45e-07,5;UBERON:0002315,9.45e-07,5 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0.422366166455,0,0.171217968225505,0.159544317990673,0.171200729931206,0.174840804837995,0,0.202475267389826,0,0,0.274228867211478,0,11.3958008802433,0.893618560807968,0.261199789138935,0,0.22940928106717,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,0.418531630736908,0.7813353445238,0.523523743973798,0,1.36609096991689,0,0.881277725829041,0.304130793658544,1.10128051297009,3.9119567217402,0,0.878744730937887,0.194429899074283,0.419959264876088,0,0,0,0,0.514518872071894,0,0.515672092277442,1.21389876515759,3.1739458756322,1.26766280701236,0.338844532069132,0,1.7997994345628,1.97773272513395,0,1.49800055259202,2.68952813725088,1.03689612308478,1.21505344498522,0.420649922702764,2.85650984403804,3.53389665522582,0.61245399607477,0.766763768145891,0.919218786610021,0,2.042997409363,1.99688493233117,1.84640802822271,2.10421580285542,0.52091337055676,0.837548997004143,1.68828783009504,2.44477196442896,3.53554302568401,1.42371680799103,1.67759501242771,0.151452386666368,0,0.289864488701678,0,0,0,0,0,1.68533304158102,0.340860645156116,0.259786004602869,0,0.281686839553361,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,1.02765491747154,0,0.445326417194474,0,0.913396434936424,0,0.301445281105245,0.940709657085638,0.251333182659351,0,0,0,0,0,0.969750506270444,0,0.878342391034642,1.04723353406728,0.510914110417183,0.11981512450592,0,0,2.09706895166752,1.83000241127451,1.13088916901578,1.91206752211504,1.53429274398198,3.1168206683934,3.0825839982874,0.101839363850316,0.124406970610093,0.252722758433675,0.420883711772948,0.390361328888111,0.459804208866946,0.540186389416048,0.452114453507145,0.204109497453984,0,0.374806898238915,0.258703370739016,0.215567992932842,0.189106080167819,0.175951124163949,0.657587197282725,0.556094498451196,0.696504333044333,0.61734640922383,0.59710280045548,0,0.257347907114715,0,0,0.469052119962192,1.08037236876609,1.42046841351126,0.393528463494808,0,0.465067889500816,0,0.233530684734339,0.16455984991348,0,0.243206428637567,0,0,0.134206418760372,1.68231958851302,0.720332286654991,0.660837565967596,0.264450566663544,0.639864751605702,0,0.128867461322093,0,0,0,0,0,0,0,0.779856348476481,0,0,0,0,0.571242563048644,0,0.407302655690628,0,0.350679099451593,0.126473074248515,0,0,0.123397163921801,0,0.500535317148282,0.393117990226406,0,0.202860121388503,0.241177159752417,0,0,0,0,0,0,0,0,0,0.482443521363367,0.184753190166605,0.757965647081939,0,0.169745085775188,0,0.167506257441816,0,0,0,0.44292937929755,0.159454768657487,0,0,0.144649058581512,0,0,0,0.551873492609465,0.80275294993896,2.34423373184406,0.655739781506702,0,1.57754109708128,1.17131623288992,1.07711698866399,0.955875191810208,1.11399337041197,0.283076530788832,0,0.876767573733936,1.58115111178609,1.28528526568723,0.709700426041343,0.35613120733451,0.162886959353576,0.329940245945071,2.65490276679926,0.728341908464944,0.302323556964751,1.50884063804718,1.18120757152309,1.22974059177571,0.775284879504663,1.09060118843252,0.356497378384721,2.52829406348653,4.21674434299995,1.03135543248187,2.7235168460303,0.36012218806262,1.03486947026204,1.71469628025274,5.32020700926821,3.56737635204141,2.30368628842969,1.2178597964584,1.17335854031855,0.63549621259146,1.32317038832977,0.49465875882444,0,0.180938774784468,0.119372344003136,0,0,1.8542530201051,0.170870880797853,0.412773735926445,0.185194527369712,0.565105371014073,0.136694227721025,0.228778173206523,0.169978429993855,0.139951452323658,0.138199973804424,1.90934123603023,0.316335993581135,0,0.324016022465404,0.627264888043406,0.655087691238533,0,0.165306911450672,0.26175594198403,0.129614973291793,0,70.4616173355238,0.448549638131936,0,0.777804753376191,0.258319646955462,0.506868376472335,0.58678619322877,0.39061315453185,0.314578033277133,21.9841549951666,32.8354207133967,0,0,0.308132871494482,0.25984164595559,0,0,0.120195449519969,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0,0,1.77588762699252,0.269141569828427,0.839423081820392,0,0.187682475451182,0.36630324853453,0,2.00628841614145,3.3885110557024,3.22227665555024,2.29158205375759,3.60891682921744,1.37016503954128,2.2661816921691,2.70009000092722,1.35096360967266,2.71885445390523,2.07104124700728,1.03787347584177,0.399024873401031,0.341467211508268,0.486213434136588,0.628839487883947,0.183843508450014,0,0.206035057238894,0.64183841918363,0.252697211763798,0.760437899670719,0.754505365544305,0.842773567228942,0.192075457214608,0.34461281373368,0,0.347652977834566,0.38581844092741,0,0.735994600671987,0,0.177475806159338,0.953744759789284,0.581385666529314,0.564656282491984,0.338458431566706,0.73171189149109,0,0.543216455383447,0.561142271657738,0.237270036248348,0.29551344712669,0.818462086339379,0.154936841185966,0.192906610981141,0.749431733813838,0.467863216890817,0,0.191288332068843,0.661774257358546,0.463735671240843 | |||
|short_description=p3@Snrnp70 | |||
}} |
Latest revision as of 21:07, 26 September 2015
Short description: | p3@Snrnp70 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Snrnp70_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -367bp_to_uc009guy.1_5end |
EntrezGene: | Snrnp70 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.62e-10 | 33 |
neuronal stem cell | 2.62e-10 | 33 |
neuroblast | 2.62e-10 | 33 |
electrically signaling cell | 2.62e-10 | 33 |
CNS neuron (sensu Vertebrata) | 6.99e-10 | 23 |
neuroblast (sensu Vertebrata) | 6.99e-10 | 23 |
neural cell | 1.07e-09 | 43 |
ectodermal cell | 2.49e-09 | 44 |
neurectodermal cell | 2.49e-09 | 44 |
electrically responsive cell | 1.02e-08 | 39 |
electrically active cell | 1.02e-08 | 39 |