FFCP PHASE1:Mm9::chr9:107302127..107302180,+: Difference between revisions
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{{FFCP|EntrezGene=56808|HGNC=|MCL_coexpression_id=401|UniProt=Q6PHS9,E9Q683,E9Q5D2|association_with_transcript=-30bp_to_ENSMUST00000085092,ENSMUST00000164988,ENSMUST00000168539,NM_001174047,NM_001174048,NM_001174049,NM_001174050,NM_020263,uc009rli.2,uc009rlj.2,uc012hae.1,uc012haf.1_5end|description=CAGE_peak_1_at_Cacna2d2_5end|id=chr9:107302127..107302180,+|ontology_enrichment_celltype=CL:0000117!4.37e-14!23;CL:0000337!4.37e-14!23;CL:0000540!6.92e-09!33;CL:0000047!6.92e-09!33;CL:0000031!6.92e-09!33;CL:0000404!6.92e-09!33|ontology_enrichment_celltype_v019_2=CL:0000117,2.56e-16,23;CL:0000337,2.56e-16,23;CL:0000540,2.17e-10,33;CL:0000047,2.17e-10,33;CL:0000031,2.17e-10,33;CL:0000404,2.17e-10,33;CL:0000393,9.00e-08,39;CL:0000211,9.00e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!5.52e-25!63;UBERON:0002346!2.34e-24!71;UBERON:0003075!2.34e-24!71;UBERON:0007284!2.34e-24!71;UBERON:0001049!1.07e-23!52;UBERON:0005068!1.07e-23!52;UBERON:0006241!1.07e-23!52;UBERON:0007135!1.07e-23!52;UBERON:0000955!5.66e-22!50;UBERON:0006238!5.66e-22!50;UBERON:0002616!2.18e-21!49;UBERON:0004121!3.68e-21!102;UBERON:0000924!3.68e-21!102;UBERON:0006601!3.68e-21!102;UBERON:0001017!1.09e-20!73;UBERON:0005743!1.09e-20!73;UBERON:0003056!1.43e-20!49;UBERON:0000073!1.77e-20!75;UBERON:0001016!1.77e-20!75;UBERON:0003080!1.78e-17!40;UBERON:0002020!5.44e-17!34;UBERON:0002780!9.45e-17!39;UBERON:0001890!9.45e-17!39;UBERON:0006240!9.45e-17!39;UBERON:0002791!2.55e-13!29;UBERON:0003528!2.55e-13!29;UBERON:0001893!2.55e-13!29;UBERON:0007811!1.32e-11!86;UBERON:0000153!3.60e-11!94;UBERON:0000025!1.15e-08!114;UBERON:0000956!2.75e-08!21;UBERON:0001869!2.75e-08!21;UBERON:0000203!2.75e-08!21;UBERON:0004111!3.53e-08!122;UBERON:0002619!1.04e-07!17;UBERON:0000468!5.98e-07!333;UBERON:0003076!7.50e-07!12;UBERON:0003057!7.50e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.65e-28,54;UBERON:0002346,1.17e-25,64;UBERON:0003075,1.17e-25,64;UBERON:0007284,1.17e-25,64;UBERON:0001049,1.86e-25,52;UBERON:0005068,1.86e-25,52;UBERON:0006241,1.86e-25,52;UBERON:0007135,1.86e-25,52;UBERON:0001017,9.02e-25,73;UBERON:0001016,1.15e-23,75;UBERON:0010314,7.66e-23,92;UBERON:0010371,9.52e-22,73;UBERON:0004121,3.15e-21,95;UBERON:0000924,3.15e-21,95;UBERON:0006601,3.15e-21,95;UBERON:0000955,5.33e-20,47;UBERON:0006238,5.33e-20,47;UBERON:0002616,3.38e-19,46;UBERON:0003056,8.80e-19,49;UBERON:0002020,1.96e-18,34;UBERON:0003080,1.13e-16,40;UBERON:0002780,1.07e-15,39;UBERON:0001890,1.07e-15,39;UBERON:0006240,1.07e-15,39;UBERON:0003528,2.83e-13,29;UBERON:0002791,2.83e-13,29;UBERON:0001893,2.83e-13,29;UBERON:0000025,9.45e-10,114;UBERON:0003076,1.16e-09,12;UBERON:0003057,1.16e-09,12;UBERON:0002420,1.76e-09,8;UBERON:0007245,1.76e-09,8;UBERON:0010009,1.76e-09,8;UBERON:0010011,1.76e-09,8;UBERON:0000454,1.76e-09,8;UBERON:0004111,8.38e-09,122;UBERON:0002240,4.51e-08,6;UBERON:0005174,4.51e-08,6;UBERON:0001137,4.51e-08,6;UBERON:0002619,1.31e-07,17;UBERON:0001948,3.63e-07,5;UBERON:0002315,3.63e-07,5;UBERON:0002021,4.69e-07,10;UBERON:0000411,4.69e-07,10;UBERON:0001950,4.69e-07,10|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0.659058548203415,0.194429899074283,0,0,0,0,0,0,0,0,8.6996078169627,11.1088105647127,17.747279298173,0,0,0,0,0,0,0,0.518448061542388,0.540023753326763,0.420649922702764,13.4255962669788,9.718215801871,1.83736198822431,0.958454710182364,5.51531271966013,11.0115880999389,9.19348834213351,13.0565553267807,11.0784481693363,9.05727671663856,8.85552729946492,10.3297709630511,8.4414391504752,10.3902808488231,14.7314292736834,12.6710795911202,12.1159639786445,0.075726193333184,0.377857800533928,0,0,0,0,0,0,0,0,0,0,0.985903938436763,0,0,0,0,0,0,0.11418387971906,0,0.890652834388949,0.173485326766136,0,0,0.60289056221049,0.352766121407114,0.376999773989026,0,0,0,0,0,0.484875253135222,1.86391761218122,12.296793474485,14.8707161837553,0,0,0,0,11.9832511523858,9.15001205637253,7.53926112677186,2.43354048269187,2.55715457330331,12.0517065844545,10.3834408363365,0.203678727700633,0.124406970610093,0,1.47309299120532,0.780722657776222,0.229902104433473,0.900310649026746,1.9591626318643,3.33378845841506,2.562274405697,2.34254311399322,1.55222022443409,0.215567992932842,0.378212160335639,0.175951124163949,0.219195732427575,0.556094498451196,0,0.61734640922383,0.398068533636986,0,0,0,4.14251545071004,4.22146907965973,3.24111710629827,4.26140524053378,1.37734962223183,1.23413690309903,1.62773761325285,1.07309360559848,1.05088808130453,0.987359099480883,0.164167464079095,0.486412857275134,0.292399974850665,0.439100230582101,0.805238512562231,2.73376933133365,2.57261530948211,0,0,0.213288250535234,0,0,0,0.667134131534611,0,0,0,0.251335208800269,0.198956472041151,0.38992817423824,0,0,0,0.189667900953082,0.342745537829186,0,0.407302655690628,0.387904974335251,0.49095073923223,0.126473074248515,0.147610147979602,0.31399745568275,0.123397163921801,0,0.333690211432188,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.325929952884052,0.169745085775188,0.234690248288502,0,0,0.195133647857799,0,0,0.159454768657487,0,0.345369963731791,0,0,0,0,0,8.83028244932856,7.97039468826982,0,0.504941854408746,0,0.390438744296638,0.215423397732799,0,0,0.283076530788832,0,0,0,2.89189184779626,0.141940085208269,0.178065603667255,0.325773918707152,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,2.7235168460303,0.540183282093931,0.646793418913773,0.857348140126369,1.41872186913819,1.07021290561242,1.31639216481697,1.2178597964584,0,0,0.441056796109924,0.49465875882444,0.484393280087717,0.120625849856312,0.358117032009409,0.328281799490123,0.291480836629851,7.6024373824309,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0.436725127492355,0.674321731924103,0.330613822901344,0.26175594198403,0.129614973291793,0,0,1.34564891439581,0.66183396182839,0,0.258319646955462,0.506868376472335,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0.405450430580328,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.221985953374065,0.179427713218951,0,0,0.187682475451182,0.36630324853453,0,0,3.95326289831947,3.22227665555024,2.29158205375759,2.40594455281163,1.37016503954128,5.2877572817279,0.675022500231806,4.05289082901798,2.26571204492102,2.5888015587591,0.518936737920883,2.79317411380722,1.36586884603307,1.45864030240976,0.419226325255965,1.10306105070008,1.77797382241292,1.85431551515005,1.28367683836726,1.01078884705519,1.52087579934144,0.943131706930381,0.749132059759059,1.60062881012173,1.49332219284595,0.476293691283074,1.62238056322798,1.15745532278223,0,1.61918812147837,1.71434626192708,0.177475806159338,2.38436189947321,1.16277133305863,0.564656282491984,1.26921911837515,1.28049581010941,1.31534855718921,1.35804113845862,1.12228454331548,1.66089025373844,1.0835493061312,1.22769312950907,0.77468420592983,1.92906610981141,2.99772693525535,0.935726433781634,2.36358159453128,1.3390183244819,0.882365676478062,0.463735671240843|short_description=p1@Cacna2d2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56808 | |||
|HGNC= | |||
|MCL_coexpression_id=401 | |||
|TSSclassifier=NA | |||
|UniProt=Q6PHS9,E9Q683,E9Q5D2 | |||
|association_with_transcript=-30bp_to_ENSMUST00000085092,ENSMUST00000164988,ENSMUST00000168539,NM_001174047,NM_001174048,NM_001174049,NM_001174050,NM_020263,uc009rli.2,uc009rlj.2,uc012hae.1,uc012haf.1_5end | |||
|cluster_id=chr9:107302127..107302180,+ | |||
|description=CAGE_peak_1_at_Cacna2d2_5end | |||
|id=chr9:107302127..107302180,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.37e-14!23;CL:0000337!4.37e-14!23;CL:0000540!6.92e-09!33;CL:0000047!6.92e-09!33;CL:0000031!6.92e-09!33;CL:0000404!6.92e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.56e-16,23;CL:0000337,2.56e-16,23;CL:0000540,2.17e-10,33;CL:0000047,2.17e-10,33;CL:0000031,2.17e-10,33;CL:0000404,2.17e-10,33;CL:0000393,9.00e-08,39;CL:0000211,9.00e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!5.52e-25!63;UBERON:0002346!2.34e-24!71;UBERON:0003075!2.34e-24!71;UBERON:0007284!2.34e-24!71;UBERON:0001049!1.07e-23!52;UBERON:0005068!1.07e-23!52;UBERON:0006241!1.07e-23!52;UBERON:0007135!1.07e-23!52;UBERON:0000955!5.66e-22!50;UBERON:0006238!5.66e-22!50;UBERON:0002616!2.18e-21!49;UBERON:0004121!3.68e-21!102;UBERON:0000924!3.68e-21!102;UBERON:0006601!3.68e-21!102;UBERON:0001017!1.09e-20!73;UBERON:0005743!1.09e-20!73;UBERON:0003056!1.43e-20!49;UBERON:0000073!1.77e-20!75;UBERON:0001016!1.77e-20!75;UBERON:0003080!1.78e-17!40;UBERON:0002020!5.44e-17!34;UBERON:0002780!9.45e-17!39;UBERON:0001890!9.45e-17!39;UBERON:0006240!9.45e-17!39;UBERON:0002791!2.55e-13!29;UBERON:0003528!2.55e-13!29;UBERON:0001893!2.55e-13!29;UBERON:0007811!1.32e-11!86;UBERON:0000153!3.60e-11!94;UBERON:0000025!1.15e-08!114;UBERON:0000956!2.75e-08!21;UBERON:0001869!2.75e-08!21;UBERON:0000203!2.75e-08!21;UBERON:0004111!3.53e-08!122;UBERON:0002619!1.04e-07!17;UBERON:0000468!5.98e-07!333;UBERON:0003076!7.50e-07!12;UBERON:0003057!7.50e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.65e-28,54;UBERON:0002346,1.17e-25,64;UBERON:0003075,1.17e-25,64;UBERON:0007284,1.17e-25,64;UBERON:0001049,1.86e-25,52;UBERON:0005068,1.86e-25,52;UBERON:0006241,1.86e-25,52;UBERON:0007135,1.86e-25,52;UBERON:0001017,9.02e-25,73;UBERON:0001016,1.15e-23,75;UBERON:0010314,7.66e-23,92;UBERON:0010371,9.52e-22,73;UBERON:0004121,3.15e-21,95;UBERON:0000924,3.15e-21,95;UBERON:0006601,3.15e-21,95;UBERON:0000955,5.33e-20,47;UBERON:0006238,5.33e-20,47;UBERON:0002616,3.38e-19,46;UBERON:0003056,8.80e-19,49;UBERON:0002020,1.96e-18,34;UBERON:0003080,1.13e-16,40;UBERON:0002780,1.07e-15,39;UBERON:0001890,1.07e-15,39;UBERON:0006240,1.07e-15,39;UBERON:0003528,2.83e-13,29;UBERON:0002791,2.83e-13,29;UBERON:0001893,2.83e-13,29;UBERON:0000025,9.45e-10,114;UBERON:0003076,1.16e-09,12;UBERON:0003057,1.16e-09,12;UBERON:0002420,1.76e-09,8;UBERON:0007245,1.76e-09,8;UBERON:0010009,1.76e-09,8;UBERON:0010011,1.76e-09,8;UBERON:0000454,1.76e-09,8;UBERON:0004111,8.38e-09,122;UBERON:0002240,4.51e-08,6;UBERON:0005174,4.51e-08,6;UBERON:0001137,4.51e-08,6;UBERON:0002619,1.31e-07,17;UBERON:0001948,3.63e-07,5;UBERON:0002315,3.63e-07,5;UBERON:0002021,4.69e-07,10;UBERON:0000411,4.69e-07,10;UBERON:0001950,4.69e-07,10 | |||
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0.659058548203415,0.194429899074283,0,0,0,0,0,0,0,0,8.6996078169627,11.1088105647127,17.747279298173,0,0,0,0,0,0,0,0.518448061542388,0.540023753326763,0.420649922702764,13.4255962669788,9.718215801871,1.83736198822431,0.958454710182364,5.51531271966013,11.0115880999389,9.19348834213351,13.0565553267807,11.0784481693363,9.05727671663856,8.85552729946492,10.3297709630511,8.4414391504752,10.3902808488231,14.7314292736834,12.6710795911202,12.1159639786445,0.075726193333184,0.377857800533928,0,0,0,0,0,0,0,0,0,0,0.985903938436763,0,0,0,0,0,0,0.11418387971906,0,0.890652834388949,0.173485326766136,0,0,0.60289056221049,0.352766121407114,0.376999773989026,0,0,0,0,0,0.484875253135222,1.86391761218122,12.296793474485,14.8707161837553,0,0,0,0,11.9832511523858,9.15001205637253,7.53926112677186,2.43354048269187,2.55715457330331,12.0517065844545,10.3834408363365,0.203678727700633,0.124406970610093,0,1.47309299120532,0.780722657776222,0.229902104433473,0.900310649026746,1.9591626318643,3.33378845841506,2.562274405697,2.34254311399322,1.55222022443409,0.215567992932842,0.378212160335639,0.175951124163949,0.219195732427575,0.556094498451196,0,0.61734640922383,0.398068533636986,0,0,0,4.14251545071004,4.22146907965973,3.24111710629827,4.26140524053378,1.37734962223183,1.23413690309903,1.62773761325285,1.07309360559848,1.05088808130453,0.987359099480883,0.164167464079095,0.486412857275134,0.292399974850665,0.439100230582101,0.805238512562231,2.73376933133365,2.57261530948211,0,0,0.213288250535234,0,0,0,0.667134131534611,0,0,0,0.251335208800269,0.198956472041151,0.38992817423824,0,0,0,0.189667900953082,0.342745537829186,0,0.407302655690628,0.387904974335251,0.49095073923223,0.126473074248515,0.147610147979602,0.31399745568275,0.123397163921801,0,0.333690211432188,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.325929952884052,0.169745085775188,0.234690248288502,0,0,0.195133647857799,0,0,0.159454768657487,0,0.345369963731791,0,0,0,0,0,8.83028244932856,7.97039468826982,0,0.504941854408746,0,0.390438744296638,0.215423397732799,0,0,0.283076530788832,0,0,0,2.89189184779626,0.141940085208269,0.178065603667255,0.325773918707152,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,2.7235168460303,0.540183282093931,0.646793418913773,0.857348140126369,1.41872186913819,1.07021290561242,1.31639216481697,1.2178597964584,0,0,0.441056796109924,0.49465875882444,0.484393280087717,0.120625849856312,0.358117032009409,0.328281799490123,0.291480836629851,7.6024373824309,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0.436725127492355,0.674321731924103,0.330613822901344,0.26175594198403,0.129614973291793,0,0,1.34564891439581,0.66183396182839,0,0.258319646955462,0.506868376472335,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0.405450430580328,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.221985953374065,0.179427713218951,0,0,0.187682475451182,0.36630324853453,0,0,3.95326289831947,3.22227665555024,2.29158205375759,2.40594455281163,1.37016503954128,5.2877572817279,0.675022500231806,4.05289082901798,2.26571204492102,2.5888015587591,0.518936737920883,2.79317411380722,1.36586884603307,1.45864030240976,0.419226325255965,1.10306105070008,1.77797382241292,1.85431551515005,1.28367683836726,1.01078884705519,1.52087579934144,0.943131706930381,0.749132059759059,1.60062881012173,1.49332219284595,0.476293691283074,1.62238056322798,1.15745532278223,0,1.61918812147837,1.71434626192708,0.177475806159338,2.38436189947321,1.16277133305863,0.564656282491984,1.26921911837515,1.28049581010941,1.31534855718921,1.35804113845862,1.12228454331548,1.66089025373844,1.0835493061312,1.22769312950907,0.77468420592983,1.92906610981141,2.99772693525535,0.935726433781634,2.36358159453128,1.3390183244819,0.882365676478062,0.463735671240843 | |||
|short_description=p1@Cacna2d2 | |||
}} |
Latest revision as of 03:20, 26 September 2015
Short description: | p1@Cacna2d2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cacna2d2_5end |
Coexpression cluster: | MCL_coexpression_mm9:401 |
Association with transcript: | -30bp_to_ENSMUST00000085092, ENSMUST00000164988, ENSMUST00000168539, NM_001174047, NM_001174048, NM_001174049, NM_001174050, NM_020263, uc009rli.2, uc009rlj.2, uc012hae.1, uc012haf.1_5end |
EntrezGene: | Cacna2d2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.56e-16 | 23 |
neuroblast (sensu Vertebrata) | 2.56e-16 | 23 |
neuron | 2.17e-10 | 33 |
neuronal stem cell | 2.17e-10 | 33 |
neuroblast | 2.17e-10 | 33 |
electrically signaling cell | 2.17e-10 | 33 |
electrically responsive cell | 9.00e-08 | 39 |
electrically active cell | 9.00e-08 | 39 |