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FFCP PHASE1:Mm9::chr14:31166760..31166789,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr14:31166760..31166789,-
|DHSsupport=NA
|short_description=p3@Cacna1d
|DPIdataset=NA
|description=CAGE_peak_3_at_Cacna1d_5end
|association_with_transcript=-88bp_to_ENSMUST00000057695,ENSMUST00000112249,NM_001083616,uc007suu.1,uc007suv.1,uc007suw.1_5end
|EntrezGene=12289
|EntrezGene=12289
|HGNC=
|HGNC=
|MCL_coexpression_id=32
|TSSclassifier=NA
|UniProt=Q99246,E9QPU4,Q6PDD2
|UniProt=Q99246,E9QPU4,Q6PDD2
|association_with_transcript=-88bp_to_ENSMUST00000057695,ENSMUST00000112249,NM_001083616,uc007suu.1,uc007suv.1,uc007suw.1_5end
|cluster_id=chr14:31166760..31166789,-
|description=CAGE_peak_3_at_Cacna1d_5end
|id=chr14:31166760..31166789,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!2.52e-15!71;UBERON:0003075!2.52e-15!71;UBERON:0007284!2.52e-15!71;UBERON:0001049!3.28e-14!52;UBERON:0005068!3.28e-14!52;UBERON:0006241!3.28e-14!52;UBERON:0007135!3.28e-14!52;UBERON:0000033!8.83e-14!63;UBERON:0003056!6.94e-13!49;UBERON:0000955!1.66e-12!50;UBERON:0006238!1.66e-12!50;UBERON:0002616!7.19e-12!49;UBERON:0003080!5.58e-11!40;UBERON:0002780!1.47e-10!39;UBERON:0001890!1.47e-10!39;UBERON:0006240!1.47e-10!39;UBERON:0002020!2.82e-10!34;UBERON:0000468!4.30e-09!333;UBERON:0001017!7.16e-09!73;UBERON:0005743!7.16e-09!73;UBERON:0002791!9.21e-09!29;UBERON:0003528!9.21e-09!29;UBERON:0001893!9.21e-09!29;UBERON:0002048!1.42e-08!14;UBERON:0000117!1.42e-08!14;UBERON:0000171!1.42e-08!14;UBERON:0000170!1.42e-08!14;UBERON:0005597!1.42e-08!14;UBERON:0000118!1.42e-08!14;UBERON:0004121!2.15e-08!102;UBERON:0000924!2.15e-08!102;UBERON:0006601!2.15e-08!102;UBERON:0000073!2.90e-08!75;UBERON:0001016!2.90e-08!75;UBERON:0000956!1.57e-07!21;UBERON:0001869!1.57e-07!21;UBERON:0000203!1.57e-07!21;UBERON:0002021!2.52e-07!10;UBERON:0000411!2.52e-07!10;UBERON:0001950!2.52e-07!10;UBERON:0000922!4.27e-07!328;UBERON:0000464!7.24e-07!57
|ontology_enrichment_uberon_v019_2=UBERON:0000955,1.73e-14,47;UBERON:0006238,1.73e-14,47;UBERON:0001049,5.05e-14,52;UBERON:0005068,5.05e-14,52;UBERON:0006241,5.05e-14,52;UBERON:0007135,5.05e-14,52;UBERON:0002616,1.33e-13,46;UBERON:0003056,2.09e-13,49;UBERON:0003080,3.43e-13,40;UBERON:0002346,3.51e-13,64;UBERON:0003075,3.51e-13,64;UBERON:0007284,3.51e-13,64;UBERON:0000073,4.65e-13,54;UBERON:0002780,1.36e-12,39;UBERON:0001890,1.36e-12,39;UBERON:0006240,1.36e-12,39;UBERON:0002048,1.46e-11,14;UBERON:0000117,1.46e-11,14;UBERON:0000171,1.46e-11,14;UBERON:0000170,1.46e-11,14;UBERON:0005597,1.46e-11,14;UBERON:0000118,1.46e-11,14;UBERON:0002020,8.48e-11,34;UBERON:0002021,3.42e-10,10;UBERON:0000411,3.42e-10,10;UBERON:0001950,3.42e-10,10;UBERON:0003528,5.45e-10,29;UBERON:0002791,5.45e-10,29;UBERON:0001893,5.45e-10,29;UBERON:0010371,5.54e-10,73;UBERON:0000025,6.82e-09,114;UBERON:0005153,1.08e-08,17;UBERON:0005178,1.08e-08,17;UBERON:0005181,1.08e-08,17;UBERON:0002224,1.08e-08,17;UBERON:0000915,1.08e-08,17;UBERON:0008947,1.08e-08,17;UBERON:0003258,1.08e-08,17;UBERON:0001017,2.26e-08,73;UBERON:0000956,3.24e-08,21;UBERON:0001869,3.24e-08,21;UBERON:0000203,3.24e-08,21;UBERON:0001016,7.46e-08,75;UBERON:0010314,1.51e-07,92;UBERON:0004111,2.47e-07,122;UBERON:0002619,4.29e-07,17;UBERON:0005157,9.89e-07,20
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.765389611359628,0,0,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0.782391344348039,0.436050312760893,0.659058548203415,0.58328969722285,0.419959264876088,0,0,0,0,0,0,0,2.22548106945558,0,0.633831403506179,0,0,0.449949858640699,0.988866362566974,0,0.599200221036809,0,1.55534418462716,0.945041568321835,1.47227472945967,1.71390590642282,0.662605622854841,0.367472397644862,0.287536413054709,0,0,0.766124028511126,0.614426133024974,1.31886287730194,1.00636407962651,1.04182674111352,1.95428099300967,0,0.61119299110724,0.883885756421003,2.27794689278565,2.42319279572891,0.227178579999552,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,1.7813056687779,0.520455980298408,0.304465478312141,1.15307748628029,1.20578112442098,1.41106448562846,0.251333182659351,0,0.144599356919912,0,0.323533699894818,0.220841518460394,0.484875253135222,0,2.92780797011547,4.60782754989601,0,0,0,0,1.79748767285787,3.66000482254901,2.51308704225729,2.9550134432687,4.34716277461562,2.0778804455956,3.40706652442291,2.03678727700633,0.870848794270651,1.0108910337347,0.841767423545896,0.520481771850815,0.919608417733892,0.720248519221397,1.05493372485001,2.17716797284249,1.40925092313335,2.06143794031403,1.03481348295606,0,0.378212160335639,0.527853372491847,0.43839146485515,0.834141747676794,0.696504333044333,1.4404749548556,0.398068533636986,0,0,0,0.414251545071004,0.234526059981096,0.36012412292203,0,0.590292695242212,0.154267112887378,0.232533944750408,0,0.233530684734339,0.16455984991348,0.492502392237286,0.486412857275134,0.438599962275997,0.219550115291051,0.268412837520744,4.20579897128254,1.9551876352064,0,0.264450566663544,0.853153002140936,0.696710015581316,1.15980715189884,0.80673409849337,0.889512175379481,0.570676878337677,0.474529061544512,0.988193728344065,0.251335208800269,0.795825888164603,0.58489226135736,2.69645822596266,0.216138049874694,0.199141273254367,0.379335801906163,0.456994050438915,1.1270773567308,0.814605311381257,0.387904974335251,1.05203729835478,1.26473074248515,0.442830443938806,0,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0.482443521363367,1.47802552133284,0.37898282354097,1.95557971730431,1.35796068620151,2.11221223459652,5.86271901046355,7.14130922658041,5.46374214001837,7.56648691709717,8.63712289630222,6.69710028361446,3.93271955317771,4.48980952851328,4.77341893318988,0,0,0,0,1.44495530989013,0.937693492737625,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0,0,0.790575555893047,9.63963949265421,1.56134093729095,0.534196811001766,0.81443479676788,2.3095817216155,1.32745138339963,1.45668381692989,0.302323556964751,0.754420319023592,0.590603785761546,0.922305443831782,1.55056975900933,0.363533729477506,1.06949213515416,2.52829406348653,2.10837217149998,1.03135543248187,2.04263763452273,0.540183282093931,0.129358683782755,0,2.12808280370728,1.07021290561242,1.81003922662333,2.43571959291679,0.23467170806371,0.21183207086382,0.441056796109924,0,0.322928853391811,0.241251699712623,0.119372344003136,0,0.291480836629851,0.741701208042039,0.341741761595705,0.619160603889667,0.370389054739423,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,0,1.42351197111511,1.01659733563424,1.18805874903981,0.418176592028937,0.436725127492355,1.21377911746339,1.1571483801547,0.26175594198403,0.777689839750757,0.621339313086926,0.56369293868419,0.598066184175915,0,0.388902376688095,0.516639293910924,0.506868376472335,0.352071715937262,1.43224823328345,1.36317147753424,1.69108884578204,0.864090018773596,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0.381034033274999,0.201652370273681,0,0,0.116876902181569,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0.549454872801795,0.428736758158132,0,4.51801474093653,3.68260189205742,3.43737308063638,2.23409137046794,2.05524755931193,3.0215755895588,5.40018000185445,2.70192721934532,2.26571204492102,4.14208249401456,0,0.399024873401031,1.19513524027894,0.486213434136588,0.628839487883947,0.919217542250071,0.666740183404846,1.44224540067226,1.92551525755089,1.01078884705519,1.2673964994512,1.88626341386076,1.68554713445788,1.15245274328765,1.09127391015665,0.476293691283074,1.39061191133827,1.54327376370964,0,0.735994600671987,0.685738504770831,1.06485483695602,1.1921809497366,1.0174249164263,1.59985946706062,1.01537529470012,1.46342378298218,0.789209134313529,1.35804113845862,1.12228454331548,0.949080144993393,1.47756723563345,1.63692417267876,1.70430525304563,1.35034627686799,2.49810577937946,1.16965804222704,1.71896843238639,0.191288332068843,0.441182838239031,0.231867835620421
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.765389611359628,0,0,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0.782391344348039,0.436050312760893,0.659058548203415,0.58328969722285,0.419959264876088,0,0,0,0,0,0,0,2.22548106945558,0,0.633831403506179,0,0,0.449949858640699,0.988866362566974,0,0.599200221036809,0,1.55534418462716,0.945041568321835,1.47227472945967,1.71390590642282,0.662605622854841,0.367472397644862,0.287536413054709,0,0,0.766124028511126,0.614426133024974,1.31886287730194,1.00636407962651,1.04182674111352,1.95428099300967,0,0.61119299110724,0.883885756421003,2.27794689278565,2.42319279572891,0.227178579999552,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,1.7813056687779,0.520455980298408,0.304465478312141,1.15307748628029,1.20578112442098,1.41106448562846,0.251333182659351,0,0.144599356919912,0,0.323533699894818,0.220841518460394,0.484875253135222,0,2.92780797011547,4.60782754989601,0,0,0,0,1.79748767285787,3.66000482254901,2.51308704225729,2.9550134432687,4.34716277461562,2.0778804455956,3.40706652442291,2.03678727700633,0.870848794270651,1.0108910337347,0.841767423545896,0.520481771850815,0.919608417733892,0.720248519221397,1.05493372485001,2.17716797284249,1.40925092313335,2.06143794031403,1.03481348295606,0,0.378212160335639,0.527853372491847,0.43839146485515,0.834141747676794,0.696504333044333,1.4404749548556,0.398068533636986,0,0,0,0.414251545071004,0.234526059981096,0.36012412292203,0,0.590292695242212,0.154267112887378,0.232533944750408,0,0.233530684734339,0.16455984991348,0.492502392237286,0.486412857275134,0.438599962275997,0.219550115291051,0.268412837520744,4.20579897128254,1.9551876352064,0,0.264450566663544,0.853153002140936,0.696710015581316,1.15980715189884,0.80673409849337,0.889512175379481,0.570676878337677,0.474529061544512,0.988193728344065,0.251335208800269,0.795825888164603,0.58489226135736,2.69645822596266,0.216138049874694,0.199141273254367,0.379335801906163,0.456994050438915,1.1270773567308,0.814605311381257,0.387904974335251,1.05203729835478,1.26473074248515,0.442830443938806,0,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0.482443521363367,1.47802552133284,0.37898282354097,1.95557971730431,1.35796068620151,2.11221223459652,5.86271901046355,7.14130922658041,5.46374214001837,7.56648691709717,8.63712289630222,6.69710028361446,3.93271955317771,4.48980952851328,4.77341893318988,0,0,0,0,1.44495530989013,0.937693492737625,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0,0,0.790575555893047,9.63963949265421,1.56134093729095,0.534196811001766,0.81443479676788,2.3095817216155,1.32745138339963,1.45668381692989,0.302323556964751,0.754420319023592,0.590603785761546,0.922305443831782,1.55056975900933,0.363533729477506,1.06949213515416,2.52829406348653,2.10837217149998,1.03135543248187,2.04263763452273,0.540183282093931,0.129358683782755,0,2.12808280370728,1.07021290561242,1.81003922662333,2.43571959291679,0.23467170806371,0.21183207086382,0.441056796109924,0,0.322928853391811,0.241251699712623,0.119372344003136,0,0.291480836629851,0.741701208042039,0.341741761595705,0.619160603889667,0.370389054739423,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,0,1.42351197111511,1.01659733563424,1.18805874903981,0.418176592028937,0.436725127492355,1.21377911746339,1.1571483801547,0.26175594198403,0.777689839750757,0.621339313086926,0.56369293868419,0.598066184175915,0,0.388902376688095,0.516639293910924,0.506868376472335,0.352071715937262,1.43224823328345,1.36317147753424,1.69108884578204,0.864090018773596,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0.381034033274999,0.201652370273681,0,0,0.116876902181569,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0.549454872801795,0.428736758158132,0,4.51801474093653,3.68260189205742,3.43737308063638,2.23409137046794,2.05524755931193,3.0215755895588,5.40018000185445,2.70192721934532,2.26571204492102,4.14208249401456,0,0.399024873401031,1.19513524027894,0.486213434136588,0.628839487883947,0.919217542250071,0.666740183404846,1.44224540067226,1.92551525755089,1.01078884705519,1.2673964994512,1.88626341386076,1.68554713445788,1.15245274328765,1.09127391015665,0.476293691283074,1.39061191133827,1.54327376370964,0,0.735994600671987,0.685738504770831,1.06485483695602,1.1921809497366,1.0174249164263,1.59985946706062,1.01537529470012,1.46342378298218,0.789209134313529,1.35804113845862,1.12228454331548,0.949080144993393,1.47756723563345,1.63692417267876,1.70430525304563,1.35034627686799,2.49810577937946,1.16965804222704,1.71896843238639,0.191288332068843,0.441182838239031,0.231867835620421
|short_description=p3@Cacna1d
}}
}}

Latest revision as of 20:45, 25 September 2015

Short description:p3@Cacna1d
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Cacna1d_5end
Coexpression cluster:MCL_coexpression_mm9:32
Association with transcript: -88bp_to_ENSMUST00000057695, ENSMUST00000112249, NM_001083616, uc007suu.1, uc007suv.1, uc007suw.1_5end
EntrezGene:Cacna1d
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Cacna1d

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.42
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.78
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I24.61
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.80
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F12.51
cortex, adult.CNhs10473.12-14D52.96
cortex, neonate N30.CNhs11107.1392-42F24.35
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B23.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.04
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C62.18
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G82.06
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E84.21
hippocampus, neonate N00.CNhs11228.627-43G11.96
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G71.05
kidney, neonate N10.CNhs11206.758-6D51.26
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A65.86
lung, embryo E18.CNhs10583.1287-20I67.14
lung, neonate N00.CNhs11224.640-42C65.46
lung, neonate N06.CNhs11212.683-20E57.57
lung, neonate N07.CNhs11111.715-19A38.64
lung, neonate N10.CNhs11219.750-23E66.70
lung, neonate N20.CNhs11109.822-18A43.93
lung, neonate N25.CNhs11119.1359-25C74.49
lung, neonate N30.CNhs11133.1394-42H24.77
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I99.64
ovary, adult.CNhs10507.91-2I71.56
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G62.31
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.42
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A91.16
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D91.36
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
brain1.73e-1447
future brain1.73e-1447
neural tube5.05e-1452
neural rod5.05e-1452
future spinal cord5.05e-1452
neural keel5.05e-1452
regional part of brain1.33e-1346
pre-chordal neural plate2.09e-1349
anterior neural tube3.43e-1340
neurectoderm3.51e-1364
neural plate3.51e-1364
presumptive neural plate3.51e-1364
regional part of nervous system4.65e-1354
regional part of forebrain1.36e-1239
forebrain1.36e-1239
future forebrain1.36e-1239
lung1.46e-1114
respiratory tube1.46e-1114
respiration organ1.46e-1114
pair of lungs1.46e-1114
lung primordium1.46e-1114
lung bud1.46e-1114
gray matter8.48e-1134
occipital lobe3.42e-1010
visual cortex3.42e-1010
neocortex3.42e-1010
brain grey matter5.45e-1029
regional part of telencephalon5.45e-1029
telencephalon5.45e-1029
ecto-epithelium5.54e-1073
tube6.82e-09114
epithelial bud1.08e-0817
thoracic cavity element1.08e-0817
thoracic segment organ1.08e-0817
thoracic cavity1.08e-0817
thoracic segment of trunk1.08e-0817
respiratory primordium1.08e-0817
endoderm of foregut1.08e-0817
central nervous system2.26e-0873
cerebral cortex3.24e-0821
cerebral hemisphere3.24e-0821
pallium3.24e-0821
nervous system7.46e-0875
structure with developmental contribution from neural crest1.51e-0792
anatomical conduit2.47e-07122
regional part of cerebral cortex4.29e-0717
epithelial fold9.89e-0720
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