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FFCP PHASE1:Mm9::chr2:25097716..25097727,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr2:25097716..25097727,+
|DHSsupport=NA
|short_description=p4@Rnf208
|DPIdataset=NA
|description=CAGE_peak_4_at_Rnf208_5end
|association_with_transcript=-47bp_to_ENSMUST00000154498_5end
|EntrezGene=68846
|EntrezGene=68846
|HGNC=
|HGNC=
|MCL_coexpression_id=87
|TSSclassifier=NA
|UniProt=Q8K0W3
|UniProt=Q8K0W3
|association_with_transcript=-47bp_to_ENSMUST00000154498_5end
|cluster_id=chr2:25097716..25097727,+
|description=CAGE_peak_4_at_Rnf208_5end
|id=chr2:25097716..25097727,+
|ontology_enrichment_celltype=CL:0000117!1.19e-14!23;CL:0000337!1.19e-14!23;CL:0000540!1.77e-12!33;CL:0000047!1.77e-12!33;CL:0000031!1.77e-12!33;CL:0000404!1.77e-12!33;CL:0000221!1.31e-10!44;CL:0000133!1.31e-10!44;CL:0002319!4.45e-10!43;CL:0000393!2.14e-08!39;CL:0000211!2.14e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000117,1.45e-33,23;CL:0000337,1.45e-33,23;CL:0000540,1.42e-21,33;CL:0000047,1.42e-21,33;CL:0000031,1.42e-21,33;CL:0000404,1.42e-21,33;CL:0000221,5.57e-20,44;CL:0000133,5.57e-20,44;CL:0002319,1.00e-18,43;CL:0000393,2.38e-17,39;CL:0000211,2.38e-17,39;CL:0002321,3.70e-10,70;CL:0002609,7.48e-08,6;CL:0002612,4.20e-07,3;CL:0000120,4.80e-07,3;CL:0002613,7.16e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!4.16e-24!102;UBERON:0000924!4.16e-24!102;UBERON:0006601!4.16e-24!102;UBERON:0002346!6.31e-22!71;UBERON:0003075!6.31e-22!71;UBERON:0007284!6.31e-22!71;UBERON:0001017!2.75e-20!73;UBERON:0005743!2.75e-20!73;UBERON:0000073!2.22e-19!75;UBERON:0001016!2.22e-19!75;UBERON:0000033!9.38e-19!63;UBERON:0001049!1.45e-18!52;UBERON:0005068!1.45e-18!52;UBERON:0006241!1.45e-18!52;UBERON:0007135!1.45e-18!52;UBERON:0003056!3.36e-16!49;UBERON:0002020!7.43e-16!34;UBERON:0000955!7.39e-15!50;UBERON:0006238!7.39e-15!50;UBERON:0002616!7.45e-15!49;UBERON:0003080!1.98e-13!40;UBERON:0002780!3.38e-13!39;UBERON:0001890!3.38e-13!39;UBERON:0006240!3.38e-13!39;UBERON:0002791!3.55e-12!29;UBERON:0003528!3.55e-12!29;UBERON:0001893!3.55e-12!29;UBERON:0007811!1.34e-08!86;UBERON:0000153!6.61e-08!94;UBERON:0000956!1.33e-07!21;UBERON:0001869!1.33e-07!21;UBERON:0000203!1.33e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.50e-25,34;UBERON:0001017,7.21e-21,73;UBERON:0001016,4.43e-20,75;UBERON:0000073,3.52e-19,54;UBERON:0001049,2.25e-18,52;UBERON:0005068,2.25e-18,52;UBERON:0006241,2.25e-18,52;UBERON:0007135,2.25e-18,52;UBERON:0003528,8.86e-17,29;UBERON:0002791,8.86e-17,29;UBERON:0001893,8.86e-17,29;UBERON:0004121,2.62e-16,95;UBERON:0000924,2.62e-16,95;UBERON:0006601,2.62e-16,95;UBERON:0002346,7.77e-15,64;UBERON:0003075,7.77e-15,64;UBERON:0007284,7.77e-15,64;UBERON:0010371,2.51e-13,73;UBERON:0002780,1.35e-12,39;UBERON:0001890,1.35e-12,39;UBERON:0006240,1.35e-12,39;UBERON:0002240,2.43e-12,6;UBERON:0005174,2.43e-12,6;UBERON:0001137,2.43e-12,6;UBERON:0003080,3.70e-12,40;UBERON:0002616,4.18e-11,46;UBERON:0001948,5.00e-11,5;UBERON:0002315,5.00e-11,5;UBERON:0002420,8.78e-11,8;UBERON:0007245,8.78e-11,8;UBERON:0010009,8.78e-11,8;UBERON:0010011,8.78e-11,8;UBERON:0000454,8.78e-11,8;UBERON:0000955,9.22e-11,47;UBERON:0006238,9.22e-11,47;UBERON:0003056,4.00e-10,49;UBERON:0010314,4.17e-09,92;UBERON:0000956,1.32e-08,21;UBERON:0001869,1.32e-08,21;UBERON:0000203,1.32e-08,21;UBERON:0003076,2.58e-07,12;UBERON:0003057,2.58e-07,12;UBERON:0002257,4.20e-07,3;UBERON:0000369,7.74e-07,5;UBERON:0002435,7.74e-07,5;UBERON:0000204,7.74e-07,5;UBERON:0010082,7.74e-07,5
|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0.380046838912748,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.439372365468944,0,0,0,0,0,0,0,0,0,2.42779753031517,2.11596391708813,3.80298842103708,0.338844532069132,0,0,0,0,1.19840044207362,3.07374644257244,1.34796496001021,1.4850653216486,2.52389953621658,5.42736870367227,4.19650227808066,1.46988959057945,1.72521847832825,0.919218786610021,0,1.40456071893706,1.53606533256243,1.45074916503213,3.01909223887952,4.16730696445408,1.3959149950069,1.12552522006336,1.22238598221448,2.65165726926301,3.13217697758026,2.42319279572891,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,1.40843419776681,0,0,0,0,0,0.505524445014783,0,0,0.29688427812965,0.173485326766136,0.913396434936424,0.461230994512117,0.452167921657868,0.470354828542819,0,0.988779870937496,0,0,0,0,0,0,0.585561594023094,1.04723353406728,0,0,0,0,0.599162557619291,0.915001205637253,2.01046963380583,0.521472960576829,1.27857728665165,1.0389402227978,0.324482526135515,0.203678727700633,0,0,0.631325567659422,0.650602214813519,0.689706313300419,0.900310649026746,0.753524089178575,0.816437989815934,0.768682321709099,1.12442069471675,0.258703370739016,0.215567992932842,0,0,0,0.278047249225598,1.0447564995665,0.61734640922383,0.398068533636986,0,0,0,0.207125772535502,0,0.36012412292203,0.23674473558521,0.196764231747404,0,0,0.268273401399619,0,0,0,0,0,0,0,0.420579897128254,1.9551876352064,0,0,0,0.464473343720877,0.257734922644187,1.21010114774006,1.33426826306922,1.14135375667535,0,0.823494773620054,0,0.198956472041151,0.58489226135736,0,0,0,0.189667900953082,0,1.1270773567308,0.203651327845314,0.193952487167626,0.771494018793504,1.7706230394792,1.03327103585722,0.941992367048249,0.863780147452604,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.325929952884052,0,0.234690248288502,0,0,0.195133647857799,0,0,0,0,0.172684981865896,0,0,0,0,0,0.963303539926752,0.937693492737625,0,0,0.94652465824877,0.390438744296638,0.215423397732799,0.477937595905104,0,0.283076530788832,0,0.292255857911312,0.790575555893047,0.321321316421807,0.141940085208269,0.35613120733451,0.977321756121456,0.164970122972535,0,0.485561272309963,0.302323556964751,0,0,0.614870295887855,0,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0,0.646793418913773,0.857348140126369,0.709360934569094,0.891844088010353,0.164549020602121,0.913394847343798,0,0,0,0.32977250588296,0.484393280087717,0.301564624640779,0.119372344003136,0.656563598980245,0,1.29797711407357,0,0.206386867963223,0,0,0,0,0,0,0,1.90934123603023,0.316335993581135,0.406638934253697,0.216010681643603,1.46361807210128,0,0.674321731924103,0.0826534557253359,0.26175594198403,0,0.621339313086926,0,1.19613236835183,0.496375471371293,0.388902376688095,1.03327858782185,1.01373675294467,1.29092962510329,2.21347454234715,0.943734099831398,0.241584120826006,0,0,0.405450430580328,0.308132871494482,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.680191150845634,0.443971906748129,0.538283139656854,0.671538465456314,0,0,0,0.643105137237198,0.501572104035363,1.6942555278512,1.38097570952153,1.71868654031819,0.68741272937475,1.37016503954128,0,0.675022500231806,0.45032120322422,1.35942722695261,0.51776031175182,0.415149390336707,0.399024873401031,0.170733605754134,0.243106717068294,0.419226325255965,0.919217542250071,0.44449345560323,0.206035057238894,0.64183841918363,0,0.25347929989024,0.188626341386076,0.187283014939765,0.640251524048693,0.574354689556133,0.476293691283074,0.463537303779422,0.964546102318525,0.824171801606613,0.294397840268795,0.342869252385415,0.532427418478012,0.238436189947321,0,0.376437521661322,0.169229215783353,0.182927972872773,0.263069711437843,0.679020569229309,0,0.355905054372522,0.591026894253381,0.818462086339379,0.619747364743864,0.192906610981141,1.49886346762768,0.935726433781634,0.429742108096597,0.57386499620653,0.220591419119515,0.231867835620421
|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0.380046838912748,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.439372365468944,0,0,0,0,0,0,0,0,0,2.42779753031517,2.11596391708813,3.80298842103708,0.338844532069132,0,0,0,0,1.19840044207362,3.07374644257244,1.34796496001021,1.4850653216486,2.52389953621658,5.42736870367227,4.19650227808066,1.46988959057945,1.72521847832825,0.919218786610021,0,1.40456071893706,1.53606533256243,1.45074916503213,3.01909223887952,4.16730696445408,1.3959149950069,1.12552522006336,1.22238598221448,2.65165726926301,3.13217697758026,2.42319279572891,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,1.40843419776681,0,0,0,0,0,0.505524445014783,0,0,0.29688427812965,0.173485326766136,0.913396434936424,0.461230994512117,0.452167921657868,0.470354828542819,0,0.988779870937496,0,0,0,0,0,0,0.585561594023094,1.04723353406728,0,0,0,0,0.599162557619291,0.915001205637253,2.01046963380583,0.521472960576829,1.27857728665165,1.0389402227978,0.324482526135515,0.203678727700633,0,0,0.631325567659422,0.650602214813519,0.689706313300419,0.900310649026746,0.753524089178575,0.816437989815934,0.768682321709099,1.12442069471675,0.258703370739016,0.215567992932842,0,0,0,0.278047249225598,1.0447564995665,0.61734640922383,0.398068533636986,0,0,0,0.207125772535502,0,0.36012412292203,0.23674473558521,0.196764231747404,0,0,0.268273401399619,0,0,0,0,0,0,0,0.420579897128254,1.9551876352064,0,0,0,0.464473343720877,0.257734922644187,1.21010114774006,1.33426826306922,1.14135375667535,0,0.823494773620054,0,0.198956472041151,0.58489226135736,0,0,0,0.189667900953082,0,1.1270773567308,0.203651327845314,0.193952487167626,0.771494018793504,1.7706230394792,1.03327103585722,0.941992367048249,0.863780147452604,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.325929952884052,0,0.234690248288502,0,0,0.195133647857799,0,0,0,0,0.172684981865896,0,0,0,0,0,0.963303539926752,0.937693492737625,0,0,0.94652465824877,0.390438744296638,0.215423397732799,0.477937595905104,0,0.283076530788832,0,0.292255857911312,0.790575555893047,0.321321316421807,0.141940085208269,0.35613120733451,0.977321756121456,0.164970122972535,0,0.485561272309963,0.302323556964751,0,0,0.614870295887855,0,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0,0.646793418913773,0.857348140126369,0.709360934569094,0.891844088010353,0.164549020602121,0.913394847343798,0,0,0,0.32977250588296,0.484393280087717,0.301564624640779,0.119372344003136,0.656563598980245,0,1.29797711407357,0,0.206386867963223,0,0,0,0,0,0,0,1.90934123603023,0.316335993581135,0.406638934253697,0.216010681643603,1.46361807210128,0,0.674321731924103,0.0826534557253359,0.26175594198403,0,0.621339313086926,0,1.19613236835183,0.496375471371293,0.388902376688095,1.03327858782185,1.01373675294467,1.29092962510329,2.21347454234715,0.943734099831398,0.241584120826006,0,0,0.405450430580328,0.308132871494482,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.680191150845634,0.443971906748129,0.538283139656854,0.671538465456314,0,0,0,0.643105137237198,0.501572104035363,1.6942555278512,1.38097570952153,1.71868654031819,0.68741272937475,1.37016503954128,0,0.675022500231806,0.45032120322422,1.35942722695261,0.51776031175182,0.415149390336707,0.399024873401031,0.170733605754134,0.243106717068294,0.419226325255965,0.919217542250071,0.44449345560323,0.206035057238894,0.64183841918363,0,0.25347929989024,0.188626341386076,0.187283014939765,0.640251524048693,0.574354689556133,0.476293691283074,0.463537303779422,0.964546102318525,0.824171801606613,0.294397840268795,0.342869252385415,0.532427418478012,0.238436189947321,0,0.376437521661322,0.169229215783353,0.182927972872773,0.263069711437843,0.679020569229309,0,0.355905054372522,0.591026894253381,0.818462086339379,0.619747364743864,0.192906610981141,1.49886346762768,0.935726433781634,0.429742108096597,0.57386499620653,0.220591419119515,0.231867835620421
|short_description=p4@Rnf208
}}
}}

Latest revision as of 10:01, 26 September 2015

Short description:p4@Rnf208
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Rnf208_5end
Coexpression cluster:MCL_coexpression_mm9:87
Association with transcript: -47bp_to_ENSMUST00000154498_5end
EntrezGene:Rnf208
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Rnf208

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.40
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.02
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.42
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F12.01
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G11.96
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D51.77
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I42.21
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter6.50e-2534
central nervous system7.21e-2173
nervous system4.43e-2075
regional part of nervous system3.52e-1954
neural tube2.25e-1852
neural rod2.25e-1852
future spinal cord2.25e-1852
neural keel2.25e-1852
brain grey matter8.86e-1729
regional part of telencephalon8.86e-1729
telencephalon8.86e-1729
ectoderm-derived structure2.62e-1695
ectoderm2.62e-1695
presumptive ectoderm2.62e-1695
neurectoderm7.77e-1564
neural plate7.77e-1564
presumptive neural plate7.77e-1564
ecto-epithelium2.51e-1373
regional part of forebrain1.35e-1239
forebrain1.35e-1239
future forebrain1.35e-1239
spinal cord2.43e-126
dorsal region element2.43e-126
dorsum2.43e-126
anterior neural tube3.70e-1240
regional part of brain4.18e-1146
regional part of spinal cord5.00e-115
gray matter of spinal cord5.00e-115
basal ganglion8.78e-118
nuclear complex of neuraxis8.78e-118
aggregate regional part of brain8.78e-118
collection of basal ganglia8.78e-118
cerebral subcortex8.78e-118
brain9.22e-1147
future brain9.22e-1147
pre-chordal neural plate4.00e-1049
structure with developmental contribution from neural crest4.17e-0992
cerebral cortex1.32e-0821
cerebral hemisphere1.32e-0821
pallium1.32e-0821
posterior neural tube2.58e-0712
chordal neural plate2.58e-0712
ventral horn of spinal cord4.20e-073
corpus striatum7.74e-075
striatum7.74e-075
ventral part of telencephalon7.74e-075
future corpus striatum7.74e-075
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