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{{f5samples
{{f5samples
|id=FF:10056-101H2
|DRA_sample_Accession=CAGE@SAMD00005114
|name=spinal cord, fetal, donor1
|accession_numbers=CAGE;DRX008729;DRR009601;DRZ001026;DRZ002411;DRZ012376;DRZ013761
|sample_id=10056
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0002240,UBERON:0000479,UBERON:0004121,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003103,UBERON:0000489,UBERON:0005174,UBERON:0010317,UBERON:0001017,UBERON:0001016,UBERON:0001137
|rna_tube_id=101H2
|rna_box=101
|rna_position=H2
|sample_cell_lot=NA
|sample_cell_catalog=NA
|sample_company=Biochain
|rna_lot_number=A703261
|rna_catalog_number=Cat:RtHFN: Spinal cord
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=29 weeks fetus
|sample_tissue=spinal cord
|sample_donor(cell lot)=1
|sample_sex=female
|sample_age=
|sample_ethnicity=A?
|rna_rin=
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=normal
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_weight_ug=10
|rna_concentration=2.6
|sample_note=
|profile_hcage=CNhs11764,LSID820,release009,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=
|ancestors_in_cell_lineage_facet=
|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000061,UBERON:0000062,UBERON:0000073,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000477,UBERON:0000479,UBERON:0000480,UBERON:0000489,UBERON:0000922,UBERON:0000923,UBERON:0000924,UBERON:0001016,UBERON:0001017,UBERON:0001049,UBERON:0001062,UBERON:0001137,UBERON:0002050,UBERON:0002100,UBERON:0002240,UBERON:0002346,UBERON:0002532,UBERON:0003057,UBERON:0003075,UBERON:0003076,UBERON:0003103,UBERON:0004121,UBERON:0005068,UBERON:0005174,UBERON:0005177,UBERON:0005423,UBERON:0005743,UBERON:0006598,UBERON:0007135,UBERON:0007284
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000999,FF:0000004,FF:0010056
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr7:100065686..100065701,-!p2@TSC22D4!2.83!679.21!TSC22D4;;chr21:34442439..34442455,+!p1@OLIG1!2.48!303.89!OLIG1;;chr22:38380543..38380569,-!p1@SOX10!2.32!208.37!SOX10;;chr21:34398234..34398250,+!p1@OLIG2!2.13!133.98!OLIG2;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!2.08!118.34!PEG3;;chr3:181429704..181429722,+!p1@SOX2!2.00!98.06!SOX2;;chr10:48355030..48355090,+!p1@ZNF488!1.95!112.00!ZNF488;;chr12:106976774..106976788,+!p1@RFX4!1.93!84.95!RFX4;;chr3:147127177..147127194,+!p2@ZIC1!1.89!76.50!ZIC1;;chr11:61520075..61520136,+!p1@C11orf9!1.87!150.47!C11orf9;;chr3:181429741..181429767,+!p2@SOX2!1.83!66.36!SOX2;;chr3:147127142..147127168,+!p1@ZIC1!1.82!65.09!ZIC1;;chr4:57547454..57547469,-!p1@HOPX!1.78!59.17!HOPX;;chr16:1031762..1031781,+!p1@SOX8!1.75!54.95!SOX8;;chr2:145277882..145277967,-!p3@ZEB2!1.71!84.11!ZEB2;;chr10:134599649..134599653,-!p1@NKX6-2!1.67!46.07!NKX6-2;;chr2:5832508..5832524,+!p1@SOX11!1.66!44.80!SOX11;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.66!44.38!POU3F3;;chr21:34442540..34442560,+!p2@OLIG1!1.61!40.15!OLIG1;;chr1:2461692..2461710,-!p1@HES5!1.57!35.93!HES5;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.57!35.93!HOXC5;;chr14:33403881..33403924,+!p1@NPAS3!1.57!35.93!NPAS3;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.55!34.66!ZBED1;;chr17:46692457..46692484,-!p2@HOXB8!1.55!34.24!HOXB8;;chr6:19837592..19837621,+!p1@ID4!1.54!199.07!ID4;;chr20:50179368..50179392,-!p2@NFATC2!1.54!43.11!NFATC2;;chr12:103351444..103351461,+!p1@ASCL1!1.54!33.39!ASCL1;;chr17:46682321..46682362,-!p1@HOXB6!1.51!31.28!HOXB6;;chr2:19558373..19558392,-!p1@OSR1!1.49!79.88!OSR1;;chr1:40105299..40105326,-!p1@HEYL!1.49!29.59!HEYL;;chr9:77112244..77112262,+!p1@RORB!1.47!31.70!RORB;;chr11:8102846..8102892,+!p1@TUB!1.45!37.19!TUB;;chr6:126070769..126070801,+!p1@HEY2!1.45!30.85!HEY2;;chr19:46801639..46801699,+!p1@HIF3A!1.45!27.05!HIF3A;;chr2:223163706..223163730,-!p1@PAX3!1.45!27.05!PAX3;;chr17:53342311..53342400,+!p1@HLF!1.43!29.59!HLF;;chr8:80679993..80680011,-!p1@HEY1!1.42!35.93!HEY1;;chr15:80696703..80696754,+!p1@ARNT2!1.42!33.81!ARNT2;;chr4:81118647..81118666,+!p1@PRDM8!1.42!33.39!PRDM8;;chr20:62680984..62680999,-!p1@SOX18!1.41!32.12!SOX18;;chr7:27192185..27192209,-!p1@HOXA3!1.41!24.94!HOXA3;;chr13:100634031..100634045,+!p1@ZIC2!1.41!24.51!ZIC2;;chr5:158526917..158526932,-!p1@EBF1!1.40!58.33!EBF1;;chr12:106976678..106976708,+!p2@RFX4!1.39!23.67!RFX4;;chr4:57547820..57547829,-!p8@HOPX!1.39!23.67!HOPX;;chr2:239148671..239148686,-!p1@HES6!1.37!79.46!HES6;;chr17:46692624..46692659,-!p3@HOXB8!1.37!22.40!HOXB8;;chr7:27196217..27196246,-!p2@HOXA7!1.37!22.40!HOXA7;;chr7:27205136..27205164,-!p1@HOXA9!1.36!21.98!HOXA9;;chr5:92919100..92919135,+!p3@NR2F1!1.35!25.78!NR2F1;;chr19:46800289..46800327,+!p2@HIF3A!1.35!21.56!HIF3A;;chr16:86600426..86600441,+!p1@FOXC2!1.31!47.76!FOXC2;;chr12:26277817..26277863,-!p2@BHLHE41!1.31!26.20!BHLHE41;;chr16:79634624..79634642,-!p1@MAF!1.29!71.85!MAF;;chr12:52445218..52445237,+!p1@NR4A1!1.28!223.16!NR4A1;;chr8:53322304..53322340,-!p1@ST18!1.28!18.17!ST18;;chr17:46690839..46690884,-!p1@HOXB8!1.27!17.75!HOXB8;;chr2:145275982..145276003,-!p7@ZEB2!1.25!16.91!ZEB2;;chr8:55370487..55370503,+!p1@SOX17!1.25!16.91!SOX17;;chr15:57511609..57511651,+!p2@TCF12!1.24!27.47!TCF12;;chr1:214161272..214161322,+!p1@PROX1!1.23!22.40!PROX1;;chr5:92918919..92918942,+!p1@NR2F1!1.22!69.32!NR2F1;;chr13:72441315..72441454,-!p1@DACH1!1.22!30.85!DACH1;;chr5:2751762..2751784,-!p1@IRX2!1.22!15.64!IRX2;;chr8:25902876..25902936,-!p1@EBF2!1.20!14.79!EBF2;;chr17:46688334..46688385,-!p1@HOXB7!1.19!21.13!HOXB7;;chr10:131762504..131762555,-!p1@EBF3!1.19!14.37!EBF3;;chr10:48359344..48359376,+!p2@ZNF488!1.19!14.37!ZNF488;;chr21:39870339..39870443,-!p1@ERG!1.19!14.37!ERG;;chr14:61116183..61116208,-!p1@SIX1!1.18!53.68!SIX1;;chr1:61548069..61548102,+!p3@NFIA!1.18!34.24!NFIA;;chr16:51185172..51185197,-!p1@SALL1!1.17!13.95!SALL1;;chr17:46692287..46692317,-!p7@HOXB8!1.17!13.95!HOXB8;;chr18:76739816..76739822,+!p1@SALL3!1.17!13.95!SALL3;;chr8:30890810..30890880,-!p1@PURG!1.17!13.95!PURG;;chr10:64576105..64576133,-!p1@EGR2!1.16!27.90!EGR2;;chr11:31839488..31839515,-!p3@PAX6!1.16!13.52!PAX6;;chr14:22005197..22005261,-!p3@SALL2!1.16!13.52!SALL2;;chr17:46675619..46675642,-!p5@HOXB6!1.16!13.52!HOXB6;;chr16:79634595..79634620,-!p2@MAF!1.15!24.09!MAF;;chr8:80680024..80680046,-!p2@HEY1!1.15!14.79!HEY1;;chr5:158527104..158527135,-!p4@EBF1!1.15!13.10!EBF1;;chr17:74137321..74137337,-!p1@FOXJ1!1.15!13.10!FOXJ1;;chr2:176994408..176994492,+!p1@HOXD8!1.15!13.10!HOXD8;;chr19:13134772..13134822,+!p2@NFIX!1.14!19.02!NFIX;;chr17:46692603..46692621,-!p6@HOXB8!1.14!12.68!HOXB8;;chr19:58545454..58545498,+!p1@ZSCAN1!1.14!12.68!ZSCAN1;;chr20:21494684..21494708,-!p1@NKX2-2!1.14!12.68!NKX2-2;;chr4:57547751..57547764,-!p6@HOPX!1.14!12.68!HOPX;;chr12:54779511..54779577,-!p5@ZNF385A!1.14!12.68!ZNF385A;;chr17:7492684..7492778,-!p2@SOX15!1.12!25.78!SOX15;;chr6:85474299..85474324,-!p1@TBX18!1.12!21.98!TBX18;;chr12:54393880.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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001016;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002240
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006601,UBERON:0006241,UBERON:0003057,UBERON:0010316
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 66: Line 41:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|top_motifs=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/spinal%2520cord%252c%2520fetal%252c%2520donor1.CNhs11764.10056-101H2.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/spinal%2520cord%252c%2520fetal%252c%2520donor1.CNhs11764.10056-101H2.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/spinal%2520cord%252c%2520fetal%252c%2520donor1.CNhs11764.10056-101H2.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/spinal%2520cord%252c%2520fetal%252c%2520donor1.CNhs11764.10056-101H2.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/spinal%2520cord%252c%2520fetal%252c%2520donor1.CNhs11764.10056-101H2.hg38.nobarcode.ctss.bed.gz
|id=FF:10056-101H2
|is_a=EFO:0002091;;FF:0010056
|is_obsolete=
|library_id=CNhs11764
|library_id_phase_based=2:CNhs11764
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10056
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10056
|name=spinal cord, fetal, donor1
|namespace=FANTOM5
|part_of=
|profile_cagescan=,,,
|profile_hcage=CNhs11764,LSID820,release009,COMPLETED
|profile_rnaseq=
|profile_srnaseq=,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=101
|rna_catalog_number=Cat:RtHFN: Spinal cord
|rna_concentration=2.6
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_lot_number=A703261
|rna_od260/230=
|rna_od260/280=
|rna_position=H2
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=101H2
|rna_weight_ug=10
|sample_age=
|sample_category=tissues
|sample_cell_catalog=NA
|sample_cell_line=
|sample_cell_lot=NA
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=Biochain
|sample_description=
|sample_dev_stage=29 weeks fetus
|sample_disease=normal
|sample_donor(cell lot)=1
|sample_ethnicity=A?
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;5.13770664043504e-276!GO:0005737;cytoplasm;2.20038684564378e-167!GO:0044444;cytoplasmic part;4.48689641820313e-111!GO:0043226;organelle;8.48771992215067e-99!GO:0043229;intracellular organelle;1.70855638158783e-98!GO:0043227;membrane-bound organelle;4.90337269735243e-84!GO:0043231;intracellular membrane-bound organelle;4.90337269735243e-84!GO:0005515;protein binding;9.04320716255106e-83!GO:0044422;organelle part;5.42755497828661e-76!GO:0044446;intracellular organelle part;6.54366734280435e-75!GO:0032991;macromolecular complex;6.02194286951353e-61!GO:0016043;cellular component organization and biogenesis;6.93801311030802e-54!GO:0030529;ribonucleoprotein complex;1.44008218624843e-39!GO:0031090;organelle membrane;1.33456172538199e-37!GO:0005739;mitochondrion;2.06709359550804e-37!GO:0043234;protein complex;8.34494881193564e-35!GO:0033036;macromolecule localization;6.43006334873421e-32!GO:0003723;RNA binding;2.84283825362595e-31!GO:0015031;protein transport;3.51716394030404e-31!GO:0008104;protein localization;2.59447485027375e-29!GO:0046907;intracellular transport;2.59681369793057e-29!GO:0044429;mitochondrial part;6.32986524298887e-29!GO:0045184;establishment of protein localization;1.56591370989772e-28!GO:0043233;organelle lumen;1.00205329128193e-27!GO:0031974;membrane-enclosed lumen;1.00205329128193e-27!GO:0031975;envelope;1.01352502135827e-26!GO:0031967;organelle envelope;1.27006808826404e-26!GO:0044238;primary metabolic process;8.47092794460084e-26!GO:0019538;protein metabolic process;1.15221422199541e-25!GO:0044428;nuclear part;7.60544193338079e-25!GO:0005829;cytosol;9.3295264189079e-25!GO:0005840;ribosome;1.95252506645597e-24!GO:0051641;cellular localization;5.02197884725612e-24!GO:0044237;cellular metabolic process;7.03552489223406e-24!GO:0051649;establishment of cellular localization;9.63744200728482e-24!GO:0006996;organelle organization and biogenesis;8.62005819864197e-23!GO:0044260;cellular macromolecule metabolic process;6.3134772599267e-22!GO:0043170;macromolecule metabolic process;9.0193889105935e-22!GO:0003735;structural constituent of ribosome;2.24555329506857e-21!GO:0044267;cellular protein metabolic process;3.6661856711193e-21!GO:0016071;mRNA metabolic process;1.20433169200343e-20!GO:0065003;macromolecular complex assembly;1.31419491189973e-20!GO:0022607;cellular component assembly;1.35447715377191e-20!GO:0006119;oxidative phosphorylation;1.45260773516193e-20!GO:0005740;mitochondrial envelope;1.48501889336368e-20!GO:0006886;intracellular protein transport;2.37410982383446e-20!GO:0031966;mitochondrial membrane;3.18891677743944e-20!GO:0016192;vesicle-mediated transport;7.33174513550673e-20!GO:0008380;RNA splicing;7.49051849504871e-20!GO:0019866;organelle inner membrane;9.14423983293433e-20!GO:0005794;Golgi apparatus;1.17006505742034e-19!GO:0009058;biosynthetic process;1.29246364525742e-19!GO:0005743;mitochondrial inner membrane;2.02942120843591e-18!GO:0033279;ribosomal subunit;3.25243047366324e-18!GO:0043228;non-membrane-bound organelle;3.25243047366324e-18!GO:0043232;intracellular non-membrane-bound organelle;3.25243047366324e-18!GO:0006412;translation;5.59925122013905e-18!GO:0031988;membrane-bound vesicle;5.22482094159634e-17!GO:0031982;vesicle;1.00871644498015e-16!GO:0006396;RNA processing;1.12463638427988e-16!GO:0044455;mitochondrial membrane part;1.12463638427988e-16!GO:0016023;cytoplasmic membrane-bound vesicle;1.35411631501787e-16!GO:0005634;nucleus;1.41425768589417e-16!GO:0006397;mRNA processing;2.16521482175791e-16!GO:0031410;cytoplasmic vesicle;2.39776017201327e-16!GO:0012505;endomembrane system;5.28302846952911e-16!GO:0009059;macromolecule biosynthetic process;1.13546449028604e-15!GO:0005746;mitochondrial respiratory chain;1.41643124381097e-15!GO:0005783;endoplasmic reticulum;5.00407538473744e-15!GO:0044249;cellular biosynthetic process;5.07310373182958e-15!GO:0048770;pigment granule;8.06003715233271e-15!GO:0042470;melanosome;8.06003715233271e-15!GO:0050136;NADH dehydrogenase (quinone) activity;1.12080423020912e-14!GO:0003954;NADH dehydrogenase activity;1.12080423020912e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.12080423020912e-14!GO:0008092;cytoskeletal protein binding;1.15355164157292e-14!GO:0044445;cytosolic part;2.52692646416954e-14!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.40744644269385e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.92897797132048e-13!GO:0005681;spliceosome;5.47474742713888e-13!GO:0031981;nuclear lumen;7.55973407032223e-13!GO:0030964;NADH dehydrogenase complex (quinone);1.19677553190156e-12!GO:0045271;respiratory chain complex I;1.19677553190156e-12!GO:0005747;mitochondrial respiratory chain complex I;1.19677553190156e-12!GO:0007010;cytoskeleton organization and biogenesis;1.31204447830234e-12!GO:0042775;organelle ATP synthesis coupled electron transport;2.07894727807949e-12!GO:0042773;ATP synthesis coupled electron transport;2.07894727807949e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.7771965256723e-12!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.84354356607005e-11!GO:0006457;protein folding;2.84485822600354e-11!GO:0016462;pyrophosphatase activity;3.1101654138081e-11!GO:0016817;hydrolase activity, acting on acid anhydrides;4.15222698620929e-11!GO:0031980;mitochondrial lumen;7.36787579970037e-11!GO:0005759;mitochondrial matrix;7.36787579970037e-11!GO:0000166;nucleotide binding;9.52334780679638e-11!GO:0048193;Golgi vesicle transport;1.11696045971447e-10!GO:0017111;nucleoside-triphosphatase activity;1.14652890952281e-10!GO:0030036;actin cytoskeleton organization and biogenesis;2.0405844798778e-10!GO:0030029;actin filament-based process;3.29362221145852e-10!GO:0051082;unfolded protein binding;7.8267149272193e-10!GO:0008134;transcription factor binding;1.14266165946345e-09!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.47952079509359e-09!GO:0015935;small ribosomal subunit;1.52867812577781e-09!GO:0015934;large ribosomal subunit;1.65452458300306e-09!GO:0006605;protein targeting;2.11108592747765e-09!GO:0044432;endoplasmic reticulum part;2.1858301861104e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.81466714214934e-09!GO:0019829;cation-transporting ATPase activity;3.98750011303522e-09!GO:0048523;negative regulation of cellular process;4.66407707619525e-09!GO:0007399;nervous system development;6.87599863708386e-09!GO:0051603;proteolysis involved in cellular protein catabolic process;8.50103771500841e-09!GO:0005654;nucleoplasm;9.58933590778212e-09!GO:0000502;proteasome complex (sensu Eukaryota);9.70041219108934e-09!GO:0044257;cellular protein catabolic process;9.70041219108934e-09!GO:0006511;ubiquitin-dependent protein catabolic process;1.06464855009684e-08!GO:0016874;ligase activity;1.25773537407398e-08!GO:0044431;Golgi apparatus part;1.26474287414474e-08!GO:0003924;GTPase activity;1.28287341902462e-08!GO:0043283;biopolymer metabolic process;1.29470171741154e-08!GO:0008565;protein transporter activity;1.30306396329397e-08!GO:0019941;modification-dependent protein catabolic process;1.37154223942404e-08!GO:0043632;modification-dependent macromolecule catabolic process;1.37154223942404e-08!GO:0016044;membrane organization and biogenesis;2.17484424260738e-08!GO:0022618;protein-RNA complex assembly;2.21127582534193e-08!GO:0006461;protein complex assembly;2.7641247796022e-08!GO:0000902;cell morphogenesis;3.1072280079431e-08!GO:0032989;cellular structure morphogenesis;3.1072280079431e-08!GO:0044265;cellular macromolecule catabolic process;3.13631806160737e-08!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.2750648988199e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;4.86464343672833e-08!GO:0030163;protein catabolic process;5.37871158026227e-08!GO:0008135;translation factor activity, nucleic acid binding;5.68645434021161e-08!GO:0006512;ubiquitin cycle;6.04986975089048e-08!GO:0051186;cofactor metabolic process;9.24908110268948e-08!GO:0043412;biopolymer modification;1.03428588673541e-07!GO:0048519;negative regulation of biological process;1.17913371995574e-07!GO:0032553;ribonucleotide binding;1.31631951375345e-07!GO:0032555;purine ribonucleotide binding;1.31631951375345e-07!GO:0003779;actin binding;1.36099074500552e-07!GO:0006464;protein modification process;1.66279654376924e-07!GO:0044451;nucleoplasm part;1.84661332143816e-07!GO:0015986;ATP synthesis coupled proton transport;2.11670423764011e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.11670423764011e-07!GO:0007264;small GTPase mediated signal transduction;2.24086838526759e-07!GO:0031252;leading edge;2.7326236204963e-07!GO:0051179;localization;3.01534210619943e-07!GO:0030135;coated vesicle;3.13765365926976e-07!GO:0043285;biopolymer catabolic process;3.61746856162768e-07!GO:0005761;mitochondrial ribosome;3.61896860144948e-07!GO:0000313;organellar ribosome;3.61896860144948e-07!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.78184273607708e-07!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);4.65106190565151e-07!GO:0015630;microtubule cytoskeleton;4.69369929544907e-07!GO:0031965;nuclear membrane;5.49436176752218e-07!GO:0005635;nuclear envelope;5.68621911106619e-07!GO:0048475;coated membrane;5.86641843175342e-07!GO:0030117;membrane coat;5.86641843175342e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;5.95030321937175e-07!GO:0009144;purine nucleoside triphosphate metabolic process;5.95030321937175e-07!GO:0010467;gene expression;5.98003344125205e-07!GO:0046034;ATP metabolic process;6.59776910980003e-07!GO:0006913;nucleocytoplasmic transport;6.77547894688883e-07!GO:0009199;ribonucleoside triphosphate metabolic process;7.11219914056063e-07!GO:0005525;GTP binding;7.13179857845904e-07!GO:0016469;proton-transporting two-sector ATPase complex;7.26025913765311e-07!GO:0009141;nucleoside triphosphate metabolic process;7.92791820906051e-07!GO:0015629;actin cytoskeleton;9.37020919728613e-07!GO:0045045;secretory pathway;9.92176337463488e-07!GO:0009060;aerobic respiration;9.92176337463488e-07!GO:0009150;purine ribonucleotide metabolic process;1.02113239087008e-06!GO:0044248;cellular catabolic process;1.02766167170233e-06!GO:0048471;perinuclear region of cytoplasm;1.10574436838872e-06!GO:0051169;nuclear transport;1.12933231748761e-06!GO:0005768;endosome;1.15440861543935e-06!GO:0017076;purine nucleotide binding;1.18963039323002e-06!GO:0000398;nuclear mRNA splicing, via spliceosome;1.26747220710118e-06!GO:0000375;RNA splicing, via transesterification reactions;1.26747220710118e-06!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.26747220710118e-06!GO:0009057;macromolecule catabolic process;1.30333690851e-06!GO:0005793;ER-Golgi intermediate compartment;1.50287736910385e-06!GO:0015631;tubulin binding;1.67389646528145e-06!GO:0030120;vesicle coat;1.67687667748704e-06!GO:0030662;coated vesicle membrane;1.67687667748704e-06!GO:0006163;purine nucleotide metabolic process;1.67687667748704e-06!GO:0043687;post-translational protein modification;1.68399848518753e-06!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.69647988432602e-06!GO:0000139;Golgi membrane;1.71648891938438e-06!GO:0015078;hydrogen ion transmembrane transporter activity;2.04514973726161e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.08715469621416e-06!GO:0006793;phosphorus metabolic process;2.21608024109603e-06!GO:0006796;phosphate metabolic process;2.21608024109603e-06!GO:0005789;endoplasmic reticulum membrane;2.31866991978149e-06!GO:0008639;small protein conjugating enzyme activity;2.41306575814761e-06!GO:0045333;cellular respiration;2.72420099973331e-06!GO:0006446;regulation of translational initiation;2.86427262727285e-06!GO:0045786;negative regulation of progression through cell cycle;3.17957059020606e-06!GO:0004842;ubiquitin-protein ligase activity;3.25383773669575e-06!GO:0005905;coated pit;3.43404559103877e-06!GO:0006810;transport;3.52275553418507e-06!GO:0009259;ribonucleotide metabolic process;3.75699986752212e-06!GO:0006325;establishment and/or maintenance of chromatin architecture;4.966361018867e-06!GO:0003743;translation initiation factor activity;5.44809821246727e-06!GO:0006897;endocytosis;5.45376882213279e-06!GO:0010324;membrane invagination;5.45376882213279e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;5.5980731678685e-06!GO:0009055;electron carrier activity;8.21843297662862e-06!GO:0006099;tricarboxylic acid cycle;8.50192248013354e-06!GO:0046356;acetyl-CoA catabolic process;8.50192248013354e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;9.67718501028368e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;9.67718501028368e-06!GO:0032561;guanyl ribonucleotide binding;1.01247128106053e-05!GO:0019001;guanyl nucleotide binding;1.01247128106053e-05!GO:0006754;ATP biosynthetic process;1.0625937147757e-05!GO:0006753;nucleoside phosphate metabolic process;1.0625937147757e-05!GO:0017038;protein import;1.1169271455668e-05!GO:0009142;nucleoside triphosphate biosynthetic process;1.13864192774086e-05!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.13864192774086e-05!GO:0019787;small conjugating protein ligase activity;1.19292256649911e-05!GO:0045259;proton-transporting ATP synthase complex;1.25481340793385e-05!GO:0005083;small GTPase regulator activity;1.28912221445634e-05!GO:0009152;purine ribonucleotide biosynthetic process;1.36205283909556e-05!GO:0009109;coenzyme catabolic process;1.59914724215183e-05!GO:0006333;chromatin assembly or disassembly;1.63944575506226e-05!GO:0005798;Golgi-associated vesicle;1.93314886020435e-05!GO:0006323;DNA packaging;2.00119904139679e-05!GO:0006164;purine nucleotide biosynthetic process;2.16989126659789e-05!GO:0030695;GTPase regulator activity;2.38360237217591e-05!GO:0008287;protein serine/threonine phosphatase complex;2.42908219186603e-05!GO:0006413;translational initiation;3.21315893093651e-05!GO:0008361;regulation of cell size;3.55408049994519e-05!GO:0006732;coenzyme metabolic process;3.69531136351129e-05!GO:0005874;microtubule;4.33667370934046e-05!GO:0006084;acetyl-CoA metabolic process;4.39524679220559e-05!GO:0003712;transcription cofactor activity;4.78560415018382e-05!GO:0016604;nuclear body;4.83227719702477e-05!GO:0016049;cell growth;5.03130856755046e-05!GO:0051187;cofactor catabolic process;5.38372545229997e-05!GO:0005769;early endosome;5.85367706845171e-05!GO:0051128;regulation of cellular component organization and biogenesis;6.07154843710955e-05!GO:0044453;nuclear membrane part;6.29439836307755e-05!GO:0051234;establishment of localization;6.42633561466404e-05!GO:0006888;ER to Golgi vesicle-mediated transport;6.51882517374646e-05!GO:0009056;catabolic process;6.53065086350797e-05!GO:0009260;ribonucleotide biosynthetic process;7.62628014861477e-05!GO:0007049;cell cycle;8.55143867127283e-05!GO:0005581;collagen;8.80540616740656e-05!GO:0016607;nuclear speck;8.8728358045358e-05!GO:0005856;cytoskeleton;9.06417516801994e-05!GO:0016881;acid-amino acid ligase activity;0.000101509987799365!GO:0019899;enzyme binding;0.000105509841767558!GO:0030027;lamellipodium;0.000106467482940381!GO:0016126;sterol biosynthetic process;0.000121053508051245!GO:0005770;late endosome;0.000121855853712137!GO:0016564;transcription repressor activity;0.000126573803363243!GO:0022890;inorganic cation transmembrane transporter activity;0.000131817169651192!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.00016208426395469!GO:0006613;cotranslational protein targeting to membrane;0.000178245457997698!GO:0016310;phosphorylation;0.00018304691260547!GO:0006259;DNA metabolic process;0.000184185709011385!GO:0032940;secretion by cell;0.00019720093934014!GO:0005788;endoplasmic reticulum lumen;0.000211489870725863!GO:0006606;protein import into nucleus;0.000230183293609257!GO:0008654;phospholipid biosynthetic process;0.000230724251933393!GO:0051246;regulation of protein metabolic process;0.000265855882723827!GO:0065004;protein-DNA complex assembly;0.000269272035523033!GO:0008017;microtubule binding;0.000288490620571058!GO:0006334;nucleosome assembly;0.000299449797356781!GO:0051726;regulation of cell cycle;0.00031662287844803!GO:0006366;transcription from RNA polymerase II promoter;0.000317667117708819!GO:0022008;neurogenesis;0.000320322438754533!GO:0030133;transport vesicle;0.000323417959627156!GO:0016879;ligase activity, forming carbon-nitrogen bonds;0.00032910418592629!GO:0051170;nuclear import;0.000339302986298668!GO:0000074;regulation of progression through cell cycle;0.000355130418088644!GO:0000159;protein phosphatase type 2A complex;0.000386783775641385!GO:0032559;adenyl ribonucleotide binding;0.000421079530497248!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000421115734458749!GO:0015399;primary active transmembrane transporter activity;0.000421115734458749!GO:0030867;rough endoplasmic reticulum membrane;0.000507999898977063!GO:0007265;Ras protein signal transduction;0.000533311526064871!GO:0015980;energy derivation by oxidation of organic compounds;0.000559526947071029!GO:0007272;ensheathment of neurons;0.000595205848720823!GO:0008366;axon ensheathment;0.000595205848720823!GO:0005791;rough endoplasmic reticulum;0.000603256642213125!GO:0000245;spliceosome assembly;0.000603256642213125!GO:0030532;small nuclear ribonucleoprotein complex;0.000607559489434733!GO:0005524;ATP binding;0.000607559489434733!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000642210144501406!GO:0044440;endosomal part;0.000642210144501406!GO:0010008;endosome membrane;0.000642210144501406!GO:0048699;generation of neurons;0.000643634438480703!GO:0005773;vacuole;0.000665866065062302!GO:0044420;extracellular matrix part;0.000669205004046737!GO:0042623;ATPase activity, coupled;0.000683138792321308!GO:0005643;nuclear pore;0.000705186276113951!GO:0031497;chromatin assembly;0.000737718359646586!GO:0051276;chromosome organization and biogenesis;0.000748774947698767!GO:0048468;cell development;0.000749260487385034!GO:0001558;regulation of cell growth;0.000750506787516976!GO:0030136;clathrin-coated vesicle;0.00075439138216284!GO:0050767;regulation of neurogenesis;0.000762040684381149!GO:0016887;ATPase activity;0.000808871306529142!GO:0008610;lipid biosynthetic process;0.000889179984749881!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00090320066873968!GO:0050789;regulation of biological process;0.000912388134914348!GO:0030030;cell projection organization and biogenesis;0.000915429921908735!GO:0048858;cell projection morphogenesis;0.000915429921908735!GO:0032990;cell part morphogenesis;0.000915429921908735!GO:0032446;protein modification by small protein conjugation;0.000924327032994573!GO:0043623;cellular protein complex assembly;0.00095153254367286!GO:0003729;mRNA binding;0.000954673056972573!GO:0030865;cortical cytoskeleton organization and biogenesis;0.000960635029065979!GO:0012506;vesicle membrane;0.000960635029065979!GO:0005583;fibrillar collagen;0.000970478306884611!GO:0009117;nucleotide metabolic process;0.000989166788825705!GO:0009892;negative regulation of metabolic process;0.00101979807707921!GO:0031901;early endosome membrane;0.00107762166001145!GO:0030118;clathrin coat;0.00107762166001145!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00113190268374097!GO:0006916;anti-apoptosis;0.00113603412609583!GO:0005938;cell cortex;0.00119140742190391!GO:0008601;protein phosphatase type 2A regulator activity;0.00120678006179104!GO:0019717;synaptosome;0.00124185778628953!GO:0005730;nucleolus;0.00124185778628953!GO:0030182;neuron differentiation;0.00127459845658!GO:0008154;actin polymerization and/or depolymerization;0.00132787965411718!GO:0001508;regulation of action potential;0.00139954489894169!GO:0008047;enzyme activator activity;0.00141006868542851!GO:0001726;ruffle;0.00141006868542851!GO:0046467;membrane lipid biosynthetic process;0.00141006868542851!GO:0006403;RNA localization;0.00142277205331646!GO:0008250;oligosaccharyl transferase complex;0.0014281317256907!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00142931098566618!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00142931098566618!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00142931098566618!GO:0043566;structure-specific DNA binding;0.00147154568182909!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00152682542794597!GO:0005839;proteasome core complex (sensu Eukaryota);0.00153700951765315!GO:0044433;cytoplasmic vesicle part;0.00153764841242166!GO:0016567;protein ubiquitination;0.00158754638240934!GO:0006752;group transfer coenzyme metabolic process;0.00166404390000445!GO:0016481;negative regulation of transcription;0.00167942943998901!GO:0003714;transcription corepressor activity;0.00167942943998901!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0016999810274264!GO:0043069;negative regulation of programmed cell death;0.00176576539654048!GO:0043492;ATPase activity, coupled to movement of substances;0.00176580105975108!GO:0050657;nucleic acid transport;0.00178944995669304!GO:0051236;establishment of RNA localization;0.00178944995669304!GO:0050658;RNA transport;0.00178944995669304!GO:0019208;phosphatase regulator activity;0.00183209813414812!GO:0000151;ubiquitin ligase complex;0.00198191018023534!GO:0043066;negative regulation of apoptosis;0.00198191018023534!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00198957876176733!GO:0030659;cytoplasmic vesicle membrane;0.00217570459085292!GO:0043209;myelin sheath;0.00217570459085292!GO:0051188;cofactor biosynthetic process;0.00222667329850881!GO:0051920;peroxiredoxin activity;0.00222667329850881!GO:0005875;microtubule associated complex;0.00222667329850881!GO:0016311;dephosphorylation;0.00224783128022998!GO:0043005;neuron projection;0.00226317054958634!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00233443084290438!GO:0030554;adenyl nucleotide binding;0.00233553249901427!GO:0004576;oligosaccharyl transferase activity;0.0024421596699265!GO:0012501;programmed cell death;0.00245004215791634!GO:0003697;single-stranded DNA binding;0.00253613195748814!GO:0007017;microtubule-based process;0.00254708065487569!GO:0006695;cholesterol biosynthetic process;0.00259040103685149!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00262190481597118!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00265612604822463!GO:0016197;endosome transport;0.00265683511047449!GO:0008219;cell death;0.00275103287343006!GO:0016265;death;0.00275103287343006!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.00286723321294756!GO:0006915;apoptosis;0.00294697532215979!GO:0004721;phosphoprotein phosphatase activity;0.00313647567669957!GO:0001725;stress fiber;0.00313964638072409!GO:0032432;actin filament bundle;0.00313964638072409!GO:0031324;negative regulation of cellular metabolic process;0.00328174383247655!GO:0050839;cell adhesion molecule binding;0.00330889269087944!GO:0031968;organelle outer membrane;0.00332993666704558!GO:0005741;mitochondrial outer membrane;0.00332993666704558!GO:0016859;cis-trans isomerase activity;0.00334423054886062!GO:0030137;COPI-coated vesicle;0.00349189180635808!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00375263353584779!GO:0008286;insulin receptor signaling pathway;0.0038060908227656!GO:0019867;outer membrane;0.0038060908227656!GO:0007019;microtubule depolymerization;0.00382945121427504!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00395759530128367!GO:0051129;negative regulation of cellular component organization and biogenesis;0.00395836789231119!GO:0000323;lytic vacuole;0.00400127608346266!GO:0005764;lysosome;0.00400127608346266!GO:0006414;translational elongation;0.00400127608346266!GO:0042802;identical protein binding;0.0043088702571862!GO:0065002;intracellular protein transport across a membrane;0.0043320131746325!GO:0005048;signal sequence binding;0.00434171754876214!GO:0040008;regulation of growth;0.00435582726370241!GO:0005096;GTPase activator activity;0.00453309862356839!GO:0000785;chromatin;0.0045349765639817!GO:0005762;mitochondrial large ribosomal subunit;0.00464507071151122!GO:0000315;organellar large ribosomal subunit;0.00464507071151122!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00473163212259949!GO:0007266;Rho protein signal transduction;0.00473260345383622!GO:0022402;cell cycle process;0.00480231871306199!GO:0045892;negative regulation of transcription, DNA-dependent;0.00484375478155654!GO:0051674;localization of cell;0.00484375478155654!GO:0006928;cell motility;0.00484375478155654!GO:0051789;response to protein stimulus;0.00512162543560089!GO:0006986;response to unfolded protein;0.00512162543560089!GO:0006643;membrane lipid metabolic process;0.00521599329784709!GO:0019888;protein phosphatase regulator activity;0.0055095262600836!GO:0044448;cell cortex part;0.0055095262600836!GO:0051427;hormone receptor binding;0.00562820048434424!GO:0005885;Arp2/3 protein complex;0.00594952576871745!GO:0006612;protein targeting to membrane;0.00617425056513978!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00629410709188377!GO:0004812;aminoacyl-tRNA ligase activity;0.00629410709188377!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00629410709188377!GO:0030132;clathrin coat of coated pit;0.00630991646628138!GO:0031111;negative regulation of microtubule polymerization or depolymerization;0.00667320143848333!GO:0005100;Rho GTPase activator activity;0.00679481328226681!GO:0004722;protein serine/threonine phosphatase activity;0.00694260474172506!GO:0030660;Golgi-associated vesicle membrane;0.00701468297052256!GO:0030663;COPI coated vesicle membrane;0.00721146026893663!GO:0030126;COPI vesicle coat;0.00721146026893663!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.00724785179077863!GO:0019902;phosphatase binding;0.00728088367654254!GO:0051287;NAD binding;0.00737864967890787!GO:0016050;vesicle organization and biogenesis;0.00756246018760897!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00760755840774746!GO:0004298;threonine endopeptidase activity;0.00762843624448301!GO:0051261;protein depolymerization;0.00814221609202445!GO:0016791;phosphoric monoester hydrolase activity;0.00816659011506203!GO:0007050;cell cycle arrest;0.00831985381852698!GO:0006470;protein amino acid dephosphorylation;0.00832853073607348!GO:0030658;transport vesicle membrane;0.00851418519752834!GO:0048487;beta-tubulin binding;0.00872609187075194!GO:0033116;ER-Golgi intermediate compartment membrane;0.00888445847151783!GO:0050794;regulation of cellular process;0.0088919287776951!GO:0045296;cadherin binding;0.00894940235191705!GO:0005813;centrosome;0.00915416812733337!GO:0035257;nuclear hormone receptor binding;0.00932605060706415!GO:0043488;regulation of mRNA stability;0.00938088465041965!GO:0043487;regulation of RNA stability;0.00938088465041965!GO:0048167;regulation of synaptic plasticity;0.00938091603046453!GO:0016568;chromatin modification;0.00947958068809339!GO:0005869;dynactin complex;0.00961572532081749!GO:0008139;nuclear localization sequence binding;0.00997150018629423!GO:0060052;neurofilament cytoskeleton organization and biogenesis;0.00997150018629423!GO:0050811;GABA receptor binding;0.0105349574155567!GO:0009966;regulation of signal transduction;0.010898327126154!GO:0016584;nucleosome positioning;0.0110097414053551!GO:0051028;mRNA transport;0.0111767050568976!GO:0031114;regulation of microtubule depolymerization;0.0112086066721712!GO:0007026;negative regulation of microtubule depolymerization;0.0112086066721712!GO:0006607;NLS-bearing substrate import into nucleus;0.0119611748857444!GO:0006650;glycerophospholipid metabolic process;0.0121668155641806!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0125549482733094!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0125549482733094!GO:0019904;protein domain specific binding;0.0127182183695588!GO:0043038;amino acid activation;0.012927171980688!GO:0006418;tRNA aminoacylation for protein translation;0.012927171980688!GO:0043039;tRNA aminoacylation;0.012927171980688!GO:0006402;mRNA catabolic process;0.013096476366552!GO:0000904;cellular morphogenesis during differentiation;0.0132603159366732!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.0132603159366732!GO:0004667;prostaglandin-D synthase activity;0.0132603159366732!GO:0050802;circadian sleep/wake cycle, sleep;0.0132603159366732!GO:0022410;circadian sleep/wake cycle process;0.0132603159366732!GO:0042749;regulation of circadian sleep/wake cycle;0.0132603159366732!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0137905321376188!GO:0015002;heme-copper terminal oxidase activity;0.0137905321376188!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0137905321376188!GO:0004129;cytochrome-c oxidase activity;0.0137905321376188!GO:0006891;intra-Golgi vesicle-mediated transport;0.0138553165589439!GO:0009165;nucleotide biosynthetic process;0.0147080254189093!GO:0031175;neurite development;0.0147262349488597!GO:0005912;adherens junction;0.0148456367972862!GO:0048667;neuron morphogenesis during differentiation;0.0150851419717185!GO:0048812;neurite morphogenesis;0.0150851419717185!GO:0050803;regulation of synapse structure and activity;0.0151270491605302!GO:0007242;intracellular signaling cascade;0.0164793915826247!GO:0001666;response to hypoxia;0.0169157268928787!GO:0005815;microtubule organizing center;0.0169603775141025!GO:0048666;neuron development;0.0169603775141025!GO:0046930;pore complex;0.0169603775141025!GO:0030041;actin filament polymerization;0.0170587395194133!GO:0031072;heat shock protein binding;0.0171306234986874!GO:0030426;growth cone;0.0171693061738123!GO:0000314;organellar small ribosomal subunit;0.0172815890421503!GO:0005763;mitochondrial small ribosomal subunit;0.0172815890421503!GO:0051087;chaperone binding;0.0177138781232651!GO:0006672;ceramide metabolic process;0.0177138781232651!GO:0007005;mitochondrion organization and biogenesis;0.0181393560793436!GO:0018196;peptidyl-asparagine modification;0.018541968799826!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.018541968799826!GO:0005586;collagen type III;0.0188208197385433!GO:0042552;myelination;0.0189328546417988!GO:0031109;microtubule polymerization or depolymerization;0.0193210542894548!GO:0006644;phospholipid metabolic process;0.0200052121265469!GO:0030031;cell projection biogenesis;0.020807621421063!GO:0030427;site of polarized growth;0.0209776296343474!GO:0000059;protein import into nucleus, docking;0.0211529603976282!GO:0043284;biopolymer biosynthetic process;0.0212967521593871!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0212967521593871!GO:0033043;regulation of organelle organization and biogenesis;0.0212967521593871!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.0215031326490735!GO:0006595;polyamine metabolic process;0.0216701037288128!GO:0030127;COPII vesicle coat;0.0217708304840352!GO:0012507;ER to Golgi transport vesicle membrane;0.0217708304840352!GO:0003746;translation elongation factor activity;0.0220210773800049!GO:0006892;post-Golgi vesicle-mediated transport;0.0220210773800049!GO:0003713;transcription coactivator activity;0.0220537646123062!GO:0030176;integral to endoplasmic reticulum membrane;0.0225656201682233!GO:0030125;clathrin vesicle coat;0.0235028928789357!GO:0030665;clathrin coated vesicle membrane;0.0235028928789357!GO:0048500;signal recognition particle;0.0236926408789194!GO:0043021;ribonucleoprotein binding;0.0238056714013836!GO:0016408;C-acyltransferase activity;0.0242460193298257!GO:0035035;histone acetyltransferase binding;0.0250298112433678!GO:0051270;regulation of cell motility;0.0253408726625511!GO:0009108;coenzyme biosynthetic process;0.0260046784555737!GO:0046474;glycerophospholipid biosynthetic process;0.0265683942150599!GO:0046519;sphingoid metabolic process;0.0268045897930032!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.0268480811082528!GO:0005092;GDP-dissociation inhibitor activity;0.0269607139948626!GO:0043681;protein import into mitochondrion;0.0271962768180452!GO:0051168;nuclear export;0.0274778628820497!GO:0042585;germinal vesicle;0.0277065619147067!GO:0051252;regulation of RNA metabolic process;0.0280535493157565!GO:0033673;negative regulation of kinase activity;0.028116229961101!GO:0006469;negative regulation of protein kinase activity;0.028116229961101!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0286045107477557!GO:0022610;biological adhesion;0.0288445275470297!GO:0007155;cell adhesion;0.0288445275470297!GO:0008147;structural constituent of bone;0.0292060583969193!GO:0050435;beta-amyloid metabolic process;0.029316737697574!GO:0008090;retrograde axon cargo transport;0.0301210250323818!GO:0033596;TSC1-TSC2 complex;0.0301210250323818!GO:0033693;neurofilament bundle assembly;0.0301210250323818!GO:0044262;cellular carbohydrate metabolic process;0.0308651710994425!GO:0022406;membrane docking;0.0308651710994425!GO:0048278;vesicle docking;0.0308651710994425!GO:0019911;structural constituent of myelin sheath;0.0311748273054645!GO:0032956;regulation of actin cytoskeleton organization and biogenesis;0.0312376800629065!GO:0005883;neurofilament;0.0318554156730063!GO:0060053;neurofilament cytoskeleton;0.0318554156730063!GO:0030320;cellular monovalent inorganic anion homeostasis;0.0323458079758374!GO:0055083;monovalent inorganic anion homeostasis;0.0323458079758374!GO:0055064;chloride ion homeostasis;0.0323458079758374!GO:0030644;cellular chloride ion homeostasis;0.0323458079758374!GO:0030199;collagen fibril organization;0.0327171996746569!GO:0004113;2',3'-cyclic-nucleotide 3'-phosphodiesterase activity;0.0335594982095943!GO:0009214;cyclic nucleotide catabolic process;0.0335594982095943!GO:0044255;cellular lipid metabolic process;0.0337056539200505!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0340845189686756!GO:0045047;protein targeting to ER;0.0340845189686756!GO:0006665;sphingolipid metabolic process;0.0351886427247133!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0354664264125432!GO:0017166;vinculin binding;0.0358712350920543!GO:0006979;response to oxidative stress;0.0359505561304797!GO:0006509;membrane protein ectodomain proteolysis;0.0362593480260075!GO:0033619;membrane protein proteolysis;0.0362593480260075!GO:0031902;late endosome membrane;0.0362660684382751!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0363439197447378!GO:0030424;axon;0.0364913572068183!GO:0003711;transcription elongation regulator activity;0.0364913572068183!GO:0050749;apolipoprotein E receptor binding;0.0367885266802616!GO:0007167;enzyme linked receptor protein signaling pathway;0.0376223298169737!GO:0005667;transcription factor complex;0.0376288823162618!GO:0005868;cytoplasmic dynein complex;0.0377804232538143!GO:0051056;regulation of small GTPase mediated signal transduction;0.0380004268772663!GO:0006904;vesicle docking during exocytosis;0.0380004268772663!GO:0051348;negative regulation of transferase activity;0.038057463504078!GO:0001578;microtubule bundle formation;0.0386304812624058!GO:0005801;cis-Golgi network;0.0386550351480787!GO:0007409;axonogenesis;0.0392797110263066!GO:0019903;protein phosphatase binding;0.0396864319477931!GO:0007160;cell-matrix adhesion;0.0396864319477931!GO:0031628;opioid receptor binding;0.0397535208759572!GO:0031852;mu-type opioid receptor binding;0.0397535208759572!GO:0030134;ER to Golgi transport vesicle;0.0397574030337957!GO:0031589;cell-substrate adhesion;0.0397621500144004!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0403850176093549!GO:0016563;transcription activator activity;0.0403850176093549!GO:0050770;regulation of axonogenesis;0.0404125873447339!GO:0019843;rRNA binding;0.0407938838734582!GO:0007006;mitochondrial membrane organization and biogenesis;0.0407938838734582!GO:0030832;regulation of actin filament length;0.0410061317179532!GO:0007219;Notch signaling pathway;0.0413164116035057!GO:0030911;TPR domain binding;0.0413586378539461!GO:0030742;GTP-dependent protein binding;0.0413915849263544!GO:0032535;regulation of cellular component size;0.041777536582042!GO:0001540;beta-amyloid binding;0.0419427693006763!GO:0006818;hydrogen transport;0.0428418004368851!GO:0040012;regulation of locomotion;0.044986522318177!GO:0008312;7S RNA binding;0.045055578932058!GO:0009081;branched chain family amino acid metabolic process;0.0452907428102147!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0457518837876696!GO:0003690;double-stranded DNA binding;0.047344649195751!GO:0016853;isomerase activity;0.0490368781482543!GO:0031371;ubiquitin conjugating enzyme complex;0.04947060879162!GO:0016272;prefoldin complex;0.0496478930058031!GO:0040011;locomotion;0.0498419488071117
|sample_id=10056
|sample_note=
|sample_sex=female
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=spinal cord
|top_motifs=DBP:3.27666669141;HOX{A6,A7,B6,B7}:3.22968181235;SOX5:3.21700716068;MED-1{core}:3.08004502252;MYFfamily:2.99559536473;SOX{8,9,10}:2.9389146543;ZNF384:2.90718811361;ZFP161:2.86970101784;GCM1,2:2.8541300097;HIC1:2.83552128453;MTE{core}:2.81006705045;SOX2:2.79441076449;REST:2.78933841281;MAZ:2.7855792436;NHLH1,2:2.78255763796;TFAP2B:2.77825821858;EGR1..3:2.70768012595;RBPJ:2.7014654955;SMAD1..7,9:2.62846300441;MZF1:2.59083022703;MYBL2:2.58759069;BREu{core}:2.48803468913;MTF1:2.4869358331;GTF2I:2.45017094112;SPZ1:2.42807567858;EP300:2.41824965675;GATA4:2.3898228692;KLF4:2.34158988803;PATZ1:2.31466650156;PAX5:2.30772834289;GFI1B:2.29926266417;POU5F1:2.26577272352;ZBTB6:2.25223624192;FOXP1:2.17158100055;RREB1:2.16685080508;FOXM1:2.1462819294;SOX17:2.1449783122;PRDM1:2.1277577898;RFX1:2.11683668164;CUX2:2.0794811963;ZIC1..3:2.07795846851;ZNF423:2.03121661395;NFIX:1.95381552367;PRRX1,2:1.88495267553;NKX2-3_NKX2-5:1.83925582572;EBF1:1.82720655485;LMO2:1.82369786999;NKX3-2:1.79487015609;TGIF1:1.79418956157;TOPORS:1.72808955215;TFAP2{A,C}:1.66486181466;XBP1:1.63105416387;ATF2:1.6247726618;TFDP1:1.54538307191;LEF1_TCF7_TCF7L1,2:1.48082770803;SP1:1.47878110179;TLX1..3_NFIC{dimer}:1.41368781977;ONECUT1,2:1.41183136739;IKZF2:1.40332007012;OCT4_SOX2{dimer}:1.40141695462;ESR1:1.39530665145;HOX{A4,D4}:1.37888049761;FOXD3:1.37572018799;TAL1_TCF{3,4,12}:1.37517771426;TBP:1.36174259826;POU3F1..4:1.30588843229;GLI1..3:1.28752391394;JUN:1.23439897841;GTF2A1,2:1.23177148146;HBP1_HMGB_SSRP1_UBTF:1.21006460023;FOXL1:1.19301090274;VSX1,2:1.15600797886;POU6F1:1.14428147725;NKX6-1,2:1.1306534054;PAX6:1.10089356641;BPTF:1.07738595271;ADNP_IRX_SIX_ZHX:1.05110900337;FOXP3:1.03723990837;GFI1:1.03175928322;HMGA1,2:1.02193100737;NR6A1:1.01190589484;POU1F1:1.00730715702;ALX1:0.980750289385;RFX2..5_RFXANK_RFXAP:0.958429757986;NANOG:0.918476776634;MAFB:0.901977763524;IKZF1:0.897618908615;XCPE1{core}:0.871354972585;FOXQ1:0.862569764455;AHR_ARNT_ARNT2:0.831699121505;HOXA9_MEIS1:0.822713939418;CDC5L:0.809777021286;LHX3,4:0.761830870879;NKX2-1,4:0.743510056248;FOX{I1,J2}:0.696484968179;NR5A1,2:0.681116351795;NR3C1:0.680796138914;MEF2{A,B,C,D}:0.643154665241;RORA:0.613882145984;ZNF238:0.604292913526;UFEwm:0.565062446822;NRF1:0.521150125461;GZF1:0.501895495381;NFY{A,B,C}:0.47173208943;T:0.467325282016;AIRE:0.461201137574;FOX{F1,F2,J1}:0.395201728825;ZNF143:0.379444283067;TFCP2:0.357010650747;NFATC1..3:0.356861737743;GATA6:0.310686900065;TEAD1:0.300130547712;TEF:0.216838808892;PBX1:0.202882630887;HMX1:0.181677042143;STAT2,4,6:0.178524423968;YY1:0.172724700952;NR1H4:0.154820674959;TFAP4:0.144918323238;ARID5B:0.131299213327;RXR{A,B,G}:0.101047882969;NKX3-1:0.0886125158971;PAX4:0.0870594148309;CREB1:0.0504140384261;DMAP1_NCOR{1,2}_SMARC:0.0439475489288;ALX4:0.0403291349071;SRF:0.0339489348668;TBX4,5:-0.045108296622;IRF7:-0.0518436103466;FOXA2:-0.0708415538115;PAX2:-0.0709347277481;MYOD1:-0.0769210630887;NANOG{mouse}:-0.0780891272131;ZEB1:-0.092043756126;STAT1,3:-0.0960920312849;FOXO1,3,4:-0.12345742785;HNF4A_NR2F1,2:-0.126339505925;CDX1,2,4:-0.128837360915;AR:-0.129081826262;PDX1:-0.155336051286;PITX1..3:-0.160371983766;SREBF1,2:-0.171814497845;PAX3,7:-0.173699626517;FOXN1:-0.184670197639;TLX2:-0.191839879665;PAX1,9:-0.203969383567;EVI1:-0.223155170691;NFIL3:-0.236363339644;IRF1,2:-0.26521221592;ATF4:-0.283479152508;HNF1A:-0.288922043305;ATF6:-0.299304985895;ZNF148:-0.314017204726;FOX{D1,D2}:-0.342299592057;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.403314563813;CRX:-0.428381109971;HAND1,2:-0.45629433418;ATF5_CREB3:-0.462369838223;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.477768907382;HSF1,2:-0.488587554824;RXRA_VDR{dimer}:-0.51772401976;ZBTB16:-0.545749509653;NFE2L2:-0.58464639309;SNAI1..3:-0.594514366347;E2F1..5:-0.630950517734;SPIB:-0.710048245681;ESRRA:-0.745294181636;SPI1:-0.758748426459;TP53:-0.822303978078;ETS1,2:-0.845100662268;NFKB1_REL_RELA:-0.859079568641;bHLH_family:-0.897876945803;RUNX1..3:-0.952343946763;PAX8:-0.954438431545;PPARG:-0.978570946813;HIF1A:-1.01548145879;CEBPA,B_DDIT3:-1.13190443375;NFE2L1:-1.13406588058;FOSL2:-1.1432561121;FOS_FOS{B,L1}_JUN{B,D}:-1.17807081128;BACH2:-1.19754208897;HLF:-1.27927804649;NFE2:-1.29347026188;HOX{A5,B5}:-1.32064583411;EN1,2:-1.43846177629;ELK1,4_GABP{A,B1}:-1.46541764985;POU2F1..3:-1.59920897497;NKX2-2,8:-1.60265523196;MYB:-1.60824194335;ELF1,2,4:-1.62439964759;HES1:-1.79624053888;STAT5{A,B}:-3.08068458381
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10056-101H2;search_select_hide=table117:FF:10056-101H2
}}
}}

Latest revision as of 12:18, 3 June 2020

Name:spinal cord, fetal, donor1
Species:Human (Homo sapiens)
Library ID:CNhs11764
Sample type:tissues
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuespinal cord
dev stage29 weeks fetus
sexfemale
ageNA
cell typeCELL MIXTURE - tissue sample
cell lineNA
companyBiochain
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberA703261
catalog numberCat:RtHFN: Spinal cord
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005114
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11764 CAGE DRX008729 DRR009601
Accession ID Hg19

Library idBAMCTSS
CNhs11764 DRZ001026 DRZ002411
Accession ID Hg38

Library idBAMCTSS
CNhs11764 DRZ012376 DRZ013761
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0.266
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.088
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.127
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0.43
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0.266
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0.244
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0.153
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0.153
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0.356
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0.493
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.0791
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.291
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.153
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.37
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.407
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0.153
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0.05
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.0596
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0.153
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.0989
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0.43
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.153
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.153
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0.266
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0.682
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-0.138
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0.43
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0.153
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.262
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.406
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.642
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0.153
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.266
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea1.263
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.549
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.153
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0.266
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0.153
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0.356
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.00707
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.734
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0.153
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11764

Jaspar motifP-value
MA0002.26.14425e-4
MA0003.10.297
MA0004.10.196
MA0006.10.738
MA0007.10.445
MA0009.10.0877
MA0014.10.306
MA0017.10.0118
MA0018.20.259
MA0019.10.762
MA0024.10.421
MA0025.10.481
MA0027.10.569
MA0028.10.0149
MA0029.10.248
MA0030.10.853
MA0031.10.182
MA0035.20.0654
MA0038.10.144
MA0039.20.148
MA0040.10.647
MA0041.10.611
MA0042.10.993
MA0043.10.438
MA0046.10.0366
MA0047.20.00799
MA0048.10.205
MA0050.10.00216
MA0051.10.0497
MA0052.10.374
MA0055.10.00322
MA0057.10.693
MA0058.10.187
MA0059.10.0462
MA0060.10.15
MA0061.10.00513
MA0062.26.7581e-5
MA0065.20.00146
MA0066.10.0271
MA0067.10.652
MA0068.10.0219
MA0069.10.741
MA0070.10.404
MA0071.10.122
MA0072.10.277
MA0073.10.51
MA0074.10.278
MA0076.10.0146
MA0077.10.0613
MA0078.10.838
MA0079.20.671
MA0080.22.23987e-9
MA0081.10.0251
MA0083.10.778
MA0084.10.171
MA0087.10.187
MA0088.10.0601
MA0090.10.782
MA0091.10.645
MA0092.10.392
MA0093.10.226
MA0099.24.70196e-20
MA0100.10.423
MA0101.10.00115
MA0102.20.0382
MA0103.10.0823
MA0104.20.166
MA0105.16.03532e-5
MA0106.10.026
MA0107.10.00295
MA0108.23.55082e-5
MA0111.10.666
MA0112.29.35709e-4
MA0113.10.462
MA0114.10.0103
MA0115.10.215
MA0116.10.00168
MA0117.10.655
MA0119.10.0557
MA0122.10.718
MA0124.10.46
MA0125.10.197
MA0131.10.856
MA0135.10.164
MA0136.15.01209e-16
MA0137.20.581
MA0138.20.182
MA0139.10.209
MA0140.10.0252
MA0141.10.0112
MA0142.10.619
MA0143.10.247
MA0144.10.302
MA0145.10.353
MA0146.10.0132
MA0147.10.0882
MA0148.10.0394
MA0149.10.00609
MA0150.15.11222e-7
MA0152.10.234
MA0153.10.915
MA0154.10.0139
MA0155.10.823
MA0156.16.88429e-10
MA0157.10.118
MA0159.10.00749
MA0160.10.0177
MA0162.10.226
MA0163.11.39833e-7
MA0164.10.573
MA0258.10.0203
MA0259.10.446



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11764

Novel motifP-value
10.0296
100.0353
1000.375
1010.903
1020.899
1030.0636
1040.239
1050.162
1060.157
1070.541
1080.765
1090.00259
110.0154
1100.0434
1110.131
1120.394
1130.266
1140.0313
1150.331
1160.47
1170.00393
1180.0897
1190.149
120.539
1200.161
1210.735
1220.736
1230.56
1240.393
1250.462
1260.106
1270.176
1280.45
1290.467
130.00685
1300.418
1310.24
1320.349
1330.0817
1340.645
1350.263
1360.0402
1370.316
1380.567
1390.0812
140.668
1400.186
1410.218
1420.784
1430.00108
1440.947
1450.396
1460.585
1470.767
1480.193
1490.163
150.0341
1500.239
1510.662
1520.174
1530.451
1540.664
1550.216
1560.427
1570.479
1580.752
1590.155
160.134
1600.257
1610.149
1620.551
1630.524
1640.0359
1650.352
1660.255
1670.239
1680.625
1690.0109
170.128
180.0657
190.415
20.932
200.15
210.16
220.283
230.484
240.0494
250.47
265.32485e-4
270.664
280.507
290.00809
30.031
300.437
310.917
320.801
330.0939
340.997
350.391
360.103
370.0292
380.254
390.805
40.936
400.0557
410.155
420.123
430.131
440.252
450.852
460.0516
470.0426
480.0697
490.13
50.319
500.576
510.39
520.931
530.899
540.466
550.242
560.52
570.313
580.22
590.207
60.977
600.195
610.0828
620.13
630.194
640.202
650.302
660.11
670.302
680.348
690.763
70.105
700.0109
710.00779
720.222
730.0394
740.793
750.0133
760.149
770.239
780.00829
790.998
80.103
800.686
810.583
820.545
830.358
840.677
850.391
860.136
870.00488
880.731
890.427
90.649
900.0698
910.794
920.398
930.297
940.058
950.0114
960.318
970.891
980.11
990.787



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11764


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0002240 (spinal cord)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003103 (compound organ)
0000489 (cavitated compound organ)
0005174 (dorsal region element)
0010317 (germ layer / neural crest derived structure)
0001017 (central nervous system)
0001016 (nervous system)
0001137 (dorsum)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000999 (fetal tissue sample)
0000004 (tissue sample)
0010056 (human spinal cord - fetal sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0006241 (future spinal cord)
UBERON:0003057 (chordal neural plate)
UBERON:0010316 (germ layer / neural crest)

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