FFCP PHASE1:Hg19::chr11:102322581..102322600,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:102322581..102322600,- to FFCP PHASE1:Hg19::chr11:102322581..102322600,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:102322581..102322600,- | |||
|description=CAGE_peak_at_chr11:102322581..102322600,- | |||
|id=chr11:102322581..102322600,- | |||
|ontology_enrichment_celltype=CL:0002087!5.36e-15!119;CL:0002031!1.24e-14!124;CL:0000738!1.49e-14!140;CL:0002032!5.63e-09!165;CL:0000837!5.63e-09!165;CL:0000988!7.21e-09!182;CL:0002057!8.71e-09!42;CL:0000037!1.23e-08!172;CL:0000566!1.23e-08!172;CL:0000838!1.54e-08!52;CL:0002009!1.66e-08!65;CL:0000542!4.29e-08!53;CL:0000051!4.29e-08!53;CL:0000860!5.53e-08!45;CL:0002194!1.29e-07!63;CL:0000576!1.29e-07!63;CL:0000040!1.29e-07!63;CL:0000559!1.29e-07!63;CL:0000557!2.04e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.36e-11;18!CL:0000789;1.36e-11;18!CL:0002419;1.36e-11;18!CL:0000624;3.40e-09;6!CL:0000084;9.46e-09;25!CL:0000860;2.36e-07;33!CL:0002057;2.36e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.86e-12,18;CL:0000789,5.86e-12,18;CL:0002420,5.86e-12,18;CL:0002419,5.86e-12,18;CL:0000790,5.86e-12,18;CL:0002031,8.11e-11,120;CL:0002087,5.07e-10,115;CL:0000738,1.01e-09,136;CL:0000624,1.22e-09,6;CL:0000084,6.61e-09,25;CL:0000827,6.61e-09,25;CL:0000988,3.26e-08,177;CL:0002032,1.35e-07,161;CL:0000837,1.35e-07,161;CL:0000838,2.37e-07,52;CL:0000542,4.05e-07,53;CL:0000051,4.05e-07,53;CL:0000037,7.47e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000790;1.36e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.75e-16!115;UBERON:0001049!5.79e-13!57;UBERON:0005068!5.79e-13!57;UBERON:0006241!5.79e-13!57;UBERON:0007135!5.79e-13!57;UBERON:0002780!8.37e-11!41;UBERON:0001890!8.37e-11!41;UBERON:0006240!8.37e-11!41;UBERON:0003080!3.39e-10!42;UBERON:0002616!6.44e-10!59;UBERON:0001893!1.02e-09!34;UBERON:0002020!1.43e-09!34;UBERON:0003528!1.43e-09!34;UBERON:0002390!2.95e-09!102;UBERON:0003061!2.95e-09!102;UBERON:0002791!3.15e-09!33;UBERON:0005743!8.78e-09!86;UBERON:0001017!1.05e-08!82;UBERON:0000955!1.11e-08!69;UBERON:0006238!1.11e-08!69;UBERON:0001869!1.56e-08!32;UBERON:0002346!1.57e-08!90;UBERON:0002193!1.62e-08!112;UBERON:0003075!2.77e-08!86;UBERON:0007284!2.77e-08!86;UBERON:0000073!5.12e-07!94;UBERON:0001016!5.12e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.19e-11;41!UBERON:0001890;1.19e-11;41!UBERON:0000073;6.34e-11;53!UBERON:0002616;6.34e-11;53!UBERON:0000125;6.35e-11;9!UBERON:0002308;6.35e-11;9!UBERON:0003528;1.33e-10;34!UBERON:0002020;1.33e-10;34!UBERON:0001893;3.59e-10;34!UBERON:0002791;1.16e-09;32!UBERON:0001869;1.71e-09;32!UBERON:0009663;2.27e-08;7!UBERON:0002420;2.75e-08;9!UBERON:0007245;2.75e-08;9!UBERON:0010009;2.75e-08;9!UBERON:0010011;2.75e-08;9!UBERON:0000454;2.75e-08;9!UBERON:0002619;5.17e-07;22!UBERON:0001016;7.74e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.15e-20,56;UBERON:0005068,2.15e-20,56;UBERON:0006241,2.15e-20,56;UBERON:0007135,2.15e-20,56;UBERON:0000073,5.06e-17,53;UBERON:0002616,5.06e-17,53;UBERON:0002780,3.71e-14,41;UBERON:0001890,3.71e-14,41;UBERON:0003080,3.71e-14,41;UBERON:0006240,3.71e-14,41;UBERON:0001017,5.53e-14,81;UBERON:0000955,2.19e-13,68;UBERON:0006238,2.19e-13,68;UBERON:0003075,4.39e-13,82;UBERON:0007284,4.39e-13,82;UBERON:0007023,5.72e-13,114;UBERON:0001893,8.93e-13,34;UBERON:0001016,9.78e-13,89;UBERON:0003528,1.61e-12,34;UBERON:0002020,1.61e-12,34;UBERON:0002346,4.79e-12,86;UBERON:0000125,8.95e-11,9;UBERON:0002308,8.95e-11,9;UBERON:0002791,1.03e-10,32;UBERON:0001869,1.57e-10,32;UBERON:0003056,1.33e-08,61;UBERON:0010371,1.92e-08,104;UBERON:0009663,2.00e-08,7;UBERON:0002420,3.15e-08,9;UBERON:0007245,3.15e-08,9;UBERON:0010009,3.15e-08,9;UBERON:0010011,3.15e-08,9;UBERON:0000454,3.15e-08,9;UBERON:0003076,1.39e-07,15;UBERON:0003057,1.39e-07,15;UBERON:0010314,4.68e-07,132;UBERON:0002619,9.00e-07,22 | |||
|phase1_expression=0.726713517082227,0,0.563817616383885,0,0,0,0,0,0,0,0.697801167972428,0,0,0.37129905888014,0,0,0,0,0,0,0,0,0,0.136874425072884,0,2.21598876669059,1.23150884174919,1.73163718890094,0,0.767658796194425,0.464448369948228,0,0,0,0.232401601740905,0.426507697462265,0,0.553995408531877,0.601633342410425,0.217010870715852,0.671746422719773,0,0.515151135268373,0.290796477559129,0,0.242584061187816,0.697287110717054,0.822335776043652,0.309706370895104,0.28769239232215,0.256160706529101,1.18241114944293,2.41321976515633,1.29096936716765,2.70852973188684,0.376484679085209,0.272906150057846,0.674170453335254,3.97909060082173,2.88836124368484,2.55734850319616,0.989553900560148,0.598390972864896,0.426224750532694,3.77272010217159,1.70215567407342,0.622822248995575,1.00499466102697,2.60741459210101,1.3031330682307,7.26479403160043,9.57521853567668,11.3926459478718,0,0.425208599930087,0.419317291016752,0.112328631146495,0,0.32145117339416,0,0,0,0,0.546138611262131,0,0,0.800791974072025,0,0.661044872784862,0,1.1384259382189,1.17447437874188,0.382273228125229,0,1.68152568894461,0.263384084775077,1.7703879310245,1.57204305099666,1.64481199199607,5.51715434789238,3.91106719960308,2.8406868344084,3.89653456815823,2.45103005147382,2.06224135232386,2.65840673500345,1.89562704635511,1.15282187753108,2.9913649938772,1.31550323682941,1.38175008892924,5.79606171470105,2.81744470007915,2.1403266247177,5.22677619024884,1.81294948316106,1.53288197440768,3.09264700934367,1.01207876807801,0.318565414324097,1.30216690771284,1.90090408889675,1.80690142893327,2.04778577847069,0,1.4206635122641,0,1.20964045934839,1.06976078313403,0.434473211648397,0,0,0,0,0,0,0,0.486634870302636,0.567208902984407,0,0,0.589405839739707,0,0,1.29818957461873,3.30846500868608,0.664789802594326,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0.760272105718513,0,1.10298924103761,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0.408308342509787,0,0.206651562351531,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0.211931901159562,0.300091096084402,0.206105058476878,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.184099797284599,0.323292113637624,0.355009592516614,0,0.169560592310488,0,0.545492241181669,0.860413786167011,0,0.132529768321485,0,0,0.252320850875628,0,0,0.643240938192885,0,0.464367928031979,0,0,0.168584690078102,0.241011029883482,0.330881918197182,0.217879444092406,0.237270619111097,0.134831308160164,0.196221465125346,0.769494313892781,0,0,0,0,3.80265104465493,2.94848165003288,0,0,0.737930631258681,0,0,0,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0.246217006087397,0.702012795417713,0,0,0.335964256397719,0,0.358234090811393,0,0,0,0,0,0.576479813667846,0.37872730027914,0,0,0,0,0.102827492703324,0,0,0,0,0,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0,0,0,0.301439377059586,0,0.599837947092342,2.43247561282381,0.502257091432126,0,0.239624855491583,1.14861935834114,0,0.144781306667579,0,0.537182889719687,0.112085143993527,0.788123040807709,0.862510299438069,0.77005821767849,0.254094624222463,0,0,0,0,0,0,0.414415513436035,0,0,0,0.207970861530807,0,0.315404830067869,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0.82707210449155,0,0.533637789017222,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0,0.384417447767103,0.511707249066704,0,0,0,0,0,0,0,0.362578348774867,0,0,0.229628896329213,0.182091168006717,0,0,0,0,0,0.211103257785751,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0.9273691048295,0,0.330037999682352,0,0,0,0,0,0.15350367472613,0.137836572484531,0.537101224341368,0.435050081742686,0.0852266274161009,0,0.165284915360978,0,0.127612712494584,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0.974853958525138,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.941438007767792,0,0,0,0,1.01489521846434,0.764637207142375,1.13929437434833,0.476463550915578,0.411362273086194,1.94541993357815,0,0.79312517629427,0.106824071127473,0,0,0,0,0.142283686696828,0.159426272728822,0.199579371432817,1.1490322207942,1.05836791361941,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0.99921590399346,0,0.18714054040822,0.293016358543788,0,0.445773537109913,0,0,0.593929361665277,0,0,1.1253553312841,0.111308705022906,0.16480387422676,0,0.19924798825107,0,0,0.306806047506464,1.23084805461069,0.311039587661807,0.359473404589307,0,0,0.0986434056369336,0,0,1.93866549219044,1.76259386507517,0,0,0.699679999969566,0,0.1137934482855,0.254253650292766,0.236387681767936,0.344743373241465,0,0,2.65722415744152,1.20596438625408,1.52581736317083,0.552896299656123,0,1.09692698576986,0.21787692703798,2.50962739701486,0.230850775511391,0.113942055847001,0,0,0,0,0,0,1.02193298195737,0.156980256395025,0.166211681900156,0,0,0,0,0,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| ||
|short_description=p@chr11:102322581..102322600,- | |||
}} | }} |
Latest revision as of 17:28, 23 July 2015
Short description: | p@chr11:102322581..102322600, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:102322581..102322600, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.86e-12 | 18 |
alpha-beta T cell | 5.86e-12 | 18 |
immature T cell | 5.86e-12 | 18 |
mature T cell | 5.86e-12 | 18 |
immature alpha-beta T cell | 5.86e-12 | 18 |
hematopoietic lineage restricted progenitor cell | 8.11e-11 | 120 |
nongranular leukocyte | 5.07e-10 | 115 |
leukocyte | 1.01e-09 | 136 |
CD4-positive, alpha-beta T cell | 1.22e-09 | 6 |
T cell | 6.61e-09 | 25 |
pro-T cell | 6.61e-09 | 25 |
hematopoietic cell | 3.26e-08 | 177 |
hematopoietic oligopotent progenitor cell | 1.35e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.35e-07 | 161 |
lymphoid lineage restricted progenitor cell | 2.37e-07 | 52 |
lymphocyte | 4.05e-07 | 53 |
common lymphoid progenitor | 4.05e-07 | 53 |
hematopoietic stem cell | 7.47e-07 | 168 |