FFCP PHASE1:Hg19::chr11:117049445..117049466,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:117049445..117049466,+ to FFCP PHASE1:Hg19::chr11:117049445..117049466,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51092 | |EntrezGene=51092 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24272 | |HGNC=24272 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NBJ9,E9PID9,E9PMC3 | |UniProt=Q8NBJ9,E9PID9,E9PMC3 | ||
|association_with_transcript=0bp_to_ENST00000324225,ENST00000525347,ENST00000532960_5end | |||
|cluster_id=chr11:117049445..117049466,+ | |||
|description=CAGE_peak_1_at_SIDT2_5end | |||
|id=chr11:117049445..117049466,+ | |||
|ontology_enrichment_celltype=CL:0002009!8.58e-16!65;CL:0002194!1.97e-15!63;CL:0000576!1.97e-15!63;CL:0000040!1.97e-15!63;CL:0000559!1.97e-15!63;CL:0002057!2.00e-14!42;CL:0000557!2.88e-13!71;CL:0000839!3.07e-13!70;CL:0000766!9.06e-12!76;CL:0000860!1.42e-11!45;CL:0002087!4.57e-08!119;CL:0002031!5.00e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.12e-10;39!CL:0000234;2.12e-10;39!CL:0000576;1.19e-09;48!CL:0000860;1.97e-09;33!CL:0002057;1.97e-09;33!CL:0000766;6.13e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,5.24e-18,61;CL:0002194,1.17e-17,59;CL:0000576,1.17e-17,59;CL:0000040,1.17e-17,59;CL:0000559,1.17e-17,59;CL:0000473,3.49e-17,48;CL:0000234,3.49e-17,48;CL:0000557,4.36e-15,67;CL:0000839,4.48e-15,66;CL:0000860,2.00e-14,42;CL:0002057,2.00e-14,42;CL:0000766,2.32e-13,72;CL:0002087,5.84e-09,115;CL:0002031,8.13e-08,120;CL:0000738,8.27e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;8.96e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.31e-29!115;UBERON:0001049!3.04e-13!57;UBERON:0005068!3.04e-13!57;UBERON:0006241!3.04e-13!57;UBERON:0007135!3.04e-13!57;UBERON:0002204!5.61e-13!167;UBERON:0002616!4.12e-12!59;UBERON:0002371!2.44e-11!80;UBERON:0002390!5.18e-10!102;UBERON:0003061!5.18e-10!102;UBERON:0003081!8.97e-10!216;UBERON:0001474!1.13e-09!86;UBERON:0002405!2.27e-09!115;UBERON:0002193!2.77e-09!112;UBERON:0003080!9.95e-09!42;UBERON:0004765!1.17e-08!101;UBERON:0001434!1.17e-08!101;UBERON:0000955!1.46e-08!69;UBERON:0006238!1.46e-08!69;UBERON:0002780!3.05e-08!41;UBERON:0001890!3.05e-08!41;UBERON:0006240!3.05e-08!41;UBERON:0003075!8.77e-07!86;UBERON:0007284!8.77e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.60e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.29e-29,114;UBERON:0002204,2.75e-14,167;UBERON:0002371,7.93e-13,76;UBERON:0001049,1.02e-12,56;UBERON:0005068,1.02e-12,56;UBERON:0006241,1.02e-12,56;UBERON:0007135,1.02e-12,56;UBERON:0003081,2.35e-12,203;UBERON:0000073,1.37e-11,53;UBERON:0002616,1.37e-11,53;UBERON:0002405,3.47e-11,93;UBERON:0002390,3.66e-11,98;UBERON:0003061,3.66e-11,98;UBERON:0001474,6.25e-11,82;UBERON:0002193,2.61e-10,108;UBERON:0004765,4.77e-10,90;UBERON:0001434,9.21e-10,100;UBERON:0000926,4.77e-09,315;UBERON:0004120,4.77e-09,315;UBERON:0006603,4.77e-09,315;UBERON:0002780,3.05e-08,41;UBERON:0001890,3.05e-08,41;UBERON:0003080,3.05e-08,41;UBERON:0006240,3.05e-08,41;UBERON:0000955,3.79e-08,68;UBERON:0006238,3.79e-08,68;UBERON:0000479,4.71e-08,773;UBERON:0000923,1.44e-07,560;UBERON:0010316,1.44e-07,560;UBERON:0005291,1.44e-07,560;UBERON:0006598,1.44e-07,560;UBERON:0010317,1.44e-07,560;UBERON:0002532,1.44e-07,560;UBERON:0002050,3.38e-07,564;UBERON:0003075,3.53e-07,82;UBERON:0007284,3.53e-07,82 | |||
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| ||
|short_description=p1@SIDT2 | |||
}} | }} |
Latest revision as of 20:37, 15 September 2015
Short description: | p1@SIDT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SIDT2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000324225, ENST00000525347, ENST00000532960_5end |
EntrezGene: | SIDT2 |
HGNC: | 24272 |
UniProt: | Q8NBJ9E9PID9E9PMC3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 5.24e-18 | 61 |
monopoietic cell | 1.17e-17 | 59 |
monocyte | 1.17e-17 | 59 |
monoblast | 1.17e-17 | 59 |
promonocyte | 1.17e-17 | 59 |
defensive cell | 3.49e-17 | 48 |
phagocyte | 3.49e-17 | 48 |
granulocyte monocyte progenitor cell | 4.36e-15 | 67 |
myeloid lineage restricted progenitor cell | 4.48e-15 | 66 |
classical monocyte | 2.00e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.00e-14 | 42 |
myeloid leukocyte | 2.32e-13 | 72 |
nongranular leukocyte | 5.84e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 8.13e-08 | 120 |
leukocyte | 8.27e-07 | 136 |