FFCP PHASE1:Hg19::chr12:90103552..90103593,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:90103552..90103593,+ to FFCP PHASE1:Hg19::chr12:90103552..90103593,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=338758 | |EntrezGene=338758 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AK094517_5end | |||
|cluster_id=chr12:90103552..90103593,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_LOC338758_5end | |||
|id=chr12:90103552..90103593,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.97e-34!140;CL:0002057!1.29e-27!42;CL:0002087!2.10e-26!119;CL:0002031!2.36e-25!124;CL:0000860!5.43e-25!45;CL:0000037!1.91e-23!172;CL:0000566!1.91e-23!172;CL:0000766!4.51e-21!76;CL:0002032!8.64e-21!165;CL:0000837!8.64e-21!165;CL:0000988!1.80e-19!182;CL:0000557!4.33e-18!71;CL:0002009!3.24e-17!65;CL:0002194!2.70e-16!63;CL:0000576!2.70e-16!63;CL:0000040!2.70e-16!63;CL:0000559!2.70e-16!63;CL:0000839!1.95e-15!70;CL:0002320!5.79e-15!365;CL:0000134!6.13e-14!358;CL:0000763!6.20e-12!112;CL:0000049!6.20e-12!112;CL:0000048!1.96e-11!430;CL:0000034!2.00e-10!444;CL:0000723!2.91e-10!436;CL:0000838!2.85e-09!52;CL:0000542!4.79e-09!53;CL:0000051!4.79e-09!53;CL:0000219!2.52e-08!390;CL:0000791!1.22e-07!18;CL:0000789!1.22e-07!18;CL:0002420!1.22e-07!18;CL:0002419!1.22e-07!18;CL:0000790!1.22e-07!18;CL:0002393!4.91e-07!9;CL:0002397!4.91e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.17e-21;33!CL:0002057;4.17e-21;33!CL:0000576;1.90e-15;48!CL:0000473;1.57e-14;39!CL:0000234;1.57e-14;39!CL:0000766;5.07e-12;69!CL:0002087;2.85e-10;104!CL:0000738;2.73e-08;136!CL:0000791;5.22e-08;18!CL:0000789;5.22e-08;18!CL:0002419;5.22e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.56e-37,136;CL:0000860,8.19e-29,42;CL:0002057,8.19e-29,42;CL:0002087,1.38e-28,115;CL:0002031,2.68e-27,120;CL:0000037,1.10e-25,168;CL:0000473,1.94e-24,48;CL:0000234,1.94e-24,48;CL:0000766,3.17e-24,72;CL:0002032,7.66e-23,161;CL:0000837,7.66e-23,161;CL:0000988,2.69e-22,177;CL:0000557,5.80e-21,67;CL:0002009,3.84e-20,61;CL:0002194,3.86e-19,59;CL:0000576,3.86e-19,59;CL:0000040,3.86e-19,59;CL:0000559,3.86e-19,59;CL:0000839,7.12e-18,66;CL:0002320,2.62e-15,361;CL:0000134,3.01e-14,354;CL:0000763,4.88e-14,108;CL:0000049,4.88e-14,108;CL:0000048,1.66e-11,427;CL:0000034,1.11e-10,441;CL:0000723,1.41e-10,433;CL:0000838,5.92e-09,52;CL:0000542,9.86e-09,53;CL:0000051,9.86e-09,53;CL:0000219,2.14e-08,386;CL:0000791,6.41e-08,18;CL:0000789,6.41e-08,18;CL:0002420,6.41e-08,18;CL:0002419,6.41e-08,18;CL:0000790,6.41e-08,18;CL:0002393,2.74e-07,9;CL:0002397,2.74e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;4.81e-21;42!CL:0000790;5.22e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.38e-22!102;UBERON:0003061!9.38e-22!102;UBERON:0002193!1.71e-18!112;UBERON:0002371!3.81e-18!80;UBERON:0001474!2.96e-16!86;UBERON:0002384!5.82e-15!375;UBERON:0004765!2.43e-13!101;UBERON:0001434!2.43e-13!101;UBERON:0002405!1.13e-11!115;UBERON:0003080!3.37e-09!42;UBERON:0002780!3.92e-09!41;UBERON:0001890!3.92e-09!41;UBERON:0006240!3.92e-09!41;UBERON:0002204!3.97e-09!167;UBERON:0002619!7.24e-08!22;UBERON:0001869!7.91e-08!32;UBERON:0001893!1.28e-07!34;UBERON:0001049!1.75e-07!57;UBERON:0005068!1.75e-07!57;UBERON:0006241!1.75e-07!57;UBERON:0007135!1.75e-07!57;UBERON:0002791!2.72e-07!33;UBERON:0001950!3.48e-07!20;UBERON:0002020!5.10e-07!34;UBERON:0003528!5.10e-07!34;UBERON:0002616!5.35e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.74e-08;22!UBERON:0001869;1.58e-07;32!UBERON:0001950;3.03e-07;20!UBERON:0001893;3.35e-07;34!UBERON:0002780;3.81e-07;41!UBERON:0001890;3.81e-07;41!UBERON:0002791;4.75e-07;32!UBERON:0003528;9.64e-07;34!UBERON:0002020;9.64e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.20e-24,98;UBERON:0003061,2.20e-24,98;UBERON:0002193,1.23e-20,108;UBERON:0002371,1.39e-20,76;UBERON:0001474,2.97e-18,82;UBERON:0004765,2.13e-17,90;UBERON:0002405,4.28e-17,93;UBERON:0001434,6.31e-16,100;UBERON:0002384,2.81e-15,371;UBERON:0002204,1.37e-10,167;UBERON:0002780,1.03e-09,41;UBERON:0001890,1.03e-09,41;UBERON:0003080,1.03e-09,41;UBERON:0006240,1.03e-09,41;UBERON:0001869,2.34e-08,32;UBERON:0002619,3.72e-08,22;UBERON:0000073,3.92e-08,53;UBERON:0002616,3.92e-08,53;UBERON:0001893,3.95e-08,34;UBERON:0002791,9.29e-08,32;UBERON:0001049,1.07e-07,56;UBERON:0005068,1.07e-07,56;UBERON:0006241,1.07e-07,56;UBERON:0007135,1.07e-07,56;UBERON:0003528,1.72e-07,34;UBERON:0002020,1.72e-07,34;UBERON:0001950,1.92e-07,20 | |||
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| ||
|short_description=p1@LOC338758 | |||
}} | }} |
Latest revision as of 19:21, 15 September 2015
Short description: | p1@LOC338758 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC338758_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_AK094517_5end |
EntrezGene: | LOC338758 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.20e-24 | 98 |
blood island | 2.20e-24 | 98 |
hemolymphoid system | 1.23e-20 | 108 |
bone marrow | 1.39e-20 | 76 |
bone element | 2.97e-18 | 82 |
skeletal element | 2.13e-17 | 90 |
immune system | 4.28e-17 | 93 |
skeletal system | 6.31e-16 | 100 |
connective tissue | 2.81e-15 | 371 |
musculoskeletal system | 1.37e-10 | 167 |
regional part of forebrain | 1.03e-09 | 41 |
forebrain | 1.03e-09 | 41 |
anterior neural tube | 1.03e-09 | 41 |
future forebrain | 1.03e-09 | 41 |
cerebral hemisphere | 2.34e-08 | 32 |
regional part of cerebral cortex | 3.72e-08 | 22 |
regional part of nervous system | 3.92e-08 | 53 |
regional part of brain | 3.92e-08 | 53 |
telencephalon | 3.95e-08 | 34 |
regional part of telencephalon | 9.29e-08 | 32 |
neural tube | 1.07e-07 | 56 |
neural rod | 1.07e-07 | 56 |
future spinal cord | 1.07e-07 | 56 |
neural keel | 1.07e-07 | 56 |
brain grey matter | 1.72e-07 | 34 |
gray matter | 1.72e-07 | 34 |
neocortex | 1.92e-07 | 20 |