FFCP PHASE1:Hg19::chr13:77901185..77901252,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:77901185..77901252,- to FFCP PHASE1:Hg19::chr13:77901185..77901252,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23077 | |EntrezGene=23077 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23386 | |HGNC=23386 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000491491_5end | |||
|cluster_id=chr13:77901185..77901252,- | |||
|description=CAGE_peak_1_at_MYCBP2_5end | |||
|id=chr13:77901185..77901252,- | |||
|ontology_enrichment_celltype=CL:0000037!1.82e-25!172;CL:0000566!1.82e-25!172;CL:0002087!1.02e-23!119;CL:0002032!2.14e-23!165;CL:0000837!2.14e-23!165;CL:0000738!9.98e-23!140;CL:0000988!3.29e-22!182;CL:0002031!1.16e-20!124;CL:0000838!2.42e-15!52;CL:0000542!3.64e-15!53;CL:0000051!3.64e-15!53;CL:0000763!7.30e-10!112;CL:0000049!7.30e-10!112;CL:0000766!1.26e-09!76;CL:0000945!1.83e-09!24;CL:0000826!1.83e-09!24;CL:0000557!1.17e-08!71;CL:0002057!1.69e-08!42;CL:0002194!2.32e-08!63;CL:0000576!2.32e-08!63;CL:0000040!2.32e-08!63;CL:0000559!2.32e-08!63;CL:0002009!5.19e-08!65;CL:0000791!5.38e-08!18;CL:0000789!5.38e-08!18;CL:0002420!5.38e-08!18;CL:0002419!5.38e-08!18;CL:0000790!5.38e-08!18;CL:0000236!5.41e-08!14;CL:0000860!6.36e-08!45;CL:0000839!1.35e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.05e-09;24!CL:0000542;6.20e-09;53!CL:0002087;2.38e-08;104!CL:0000791;6.01e-08;18!CL:0000789;6.01e-08;18!CL:0002419;6.01e-08;18!CL:0000236;9.68e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.66e-26,168;CL:0002087,1.53e-24,115;CL:0002032,5.70e-24,161;CL:0000837,5.70e-24,161;CL:0000738,2.15e-23,136;CL:0000988,5.72e-23,177;CL:0002031,2.35e-21,120;CL:0000838,2.42e-15,52;CL:0000542,3.64e-15,53;CL:0000051,3.64e-15,53;CL:0000763,3.06e-10,108;CL:0000049,3.06e-10,108;CL:0000766,3.65e-10,72;CL:0000945,1.83e-09,24;CL:0000826,1.83e-09,24;CL:0000557,3.58e-09,67;CL:0002194,6.43e-09,59;CL:0000576,6.43e-09,59;CL:0000040,6.43e-09,59;CL:0000559,6.43e-09,59;CL:0000473,1.05e-08,48;CL:0000234,1.05e-08,48;CL:0002009,1.58e-08,61;CL:0000860,1.69e-08,42;CL:0002057,1.69e-08,42;CL:0000839,4.75e-08,66;CL:0000791,5.38e-08,18;CL:0000789,5.38e-08,18;CL:0002420,5.38e-08,18;CL:0002419,5.38e-08,18;CL:0000790,5.38e-08,18;CL:0000236,5.41e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000051;6.20e-09;53!CL:0000790;6.01e-08;18!UBERON:0006601;3.12e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.03e-35!115;UBERON:0001049!3.94e-22!57;UBERON:0005068!3.94e-22!57;UBERON:0006241!3.94e-22!57;UBERON:0007135!3.94e-22!57;UBERON:0003080!6.11e-20!42;UBERON:0002780!1.76e-19!41;UBERON:0001890!1.76e-19!41;UBERON:0006240!1.76e-19!41;UBERON:0002616!5.62e-19!59;UBERON:0002020!3.26e-17!34;UBERON:0003528!3.26e-17!34;UBERON:0001893!1.46e-16!34;UBERON:0001869!2.46e-16!32;UBERON:0000955!3.68e-16!69;UBERON:0006238!3.68e-16!69;UBERON:0001017!4.20e-16!82;UBERON:0002791!5.05e-16!33;UBERON:0000073!2.81e-14!94;UBERON:0001016!2.81e-14!94;UBERON:0005743!4.25e-14!86;UBERON:0002619!5.78e-14!22;UBERON:0000956!7.04e-13!25;UBERON:0000203!7.04e-13!25;UBERON:0001950!8.93e-13!20;UBERON:0002390!2.14e-12!102;UBERON:0003061!2.14e-12!102;UBERON:0002193!2.62e-11!112;UBERON:0003075!3.71e-10!86;UBERON:0007284!3.71e-10!86;UBERON:0002346!1.08e-09!90;UBERON:0003056!4.96e-08!61;UBERON:0000153!5.09e-08!129;UBERON:0007811!5.09e-08!129;UBERON:0002371!7.01e-07!80;UBERON:0001474!9.87e-07!86;UBERON:0000033!9.93e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;7.67e-15;34!UBERON:0002020;7.67e-15;34!UBERON:0001869;8.30e-15;32!UBERON:0002791;1.26e-14;32!UBERON:0001893;2.57e-14;34!UBERON:0002780;3.10e-14;41!UBERON:0001890;3.10e-14;41!UBERON:0002619;5.39e-14;22!UBERON:0000956;6.74e-13;25!UBERON:0000203;6.74e-13;25!UBERON:0001950;8.50e-13;20!UBERON:0000073;5.51e-12;53!UBERON:0002616;5.51e-12;53!UBERON:0007023;5.12e-10;114!UBERON:0000955;3.26e-08;68!UBERON:0001017;7.11e-08;75!UBERON:0001016;2.39e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.78e-35,114;UBERON:0001049,1.15e-21,56;UBERON:0005068,1.15e-21,56;UBERON:0006241,1.15e-21,56;UBERON:0007135,1.15e-21,56;UBERON:0000073,2.09e-20,53;UBERON:0002616,2.09e-20,53;UBERON:0002780,1.76e-19,41;UBERON:0001890,1.76e-19,41;UBERON:0003080,1.76e-19,41;UBERON:0006240,1.76e-19,41;UBERON:0003528,3.26e-17,34;UBERON:0002020,3.26e-17,34;UBERON:0001893,1.46e-16,34;UBERON:0001869,2.46e-16,32;UBERON:0002791,4.34e-16,32;UBERON:0001016,9.00e-16,89;UBERON:0000955,9.68e-16,68;UBERON:0006238,9.68e-16,68;UBERON:0001017,1.07e-15,81;UBERON:0002619,5.78e-14,22;UBERON:0002390,6.49e-13,98;UBERON:0003061,6.49e-13,98;UBERON:0000956,7.04e-13,25;UBERON:0000203,7.04e-13,25;UBERON:0001950,8.93e-13,20;UBERON:0002193,9.71e-12,108;UBERON:0003075,7.31e-11,82;UBERON:0007284,7.31e-11,82;UBERON:0002346,2.41e-10,86;UBERON:0002405,2.72e-08,93;UBERON:0003056,5.31e-08,61;UBERON:0002371,3.06e-07,76;UBERON:0001474,4.62e-07,82 | |||
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| ||
|short_description=p1@MYCBP2 | |||
}} | }} |
Latest revision as of 01:25, 18 September 2015
Short description: | p1@MYCBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MYCBP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000491491_5end |
EntrezGene: | MYCBP2 |
HGNC: | 23386 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.78e-35 | 114 |
neural tube | 1.15e-21 | 56 |
neural rod | 1.15e-21 | 56 |
future spinal cord | 1.15e-21 | 56 |
neural keel | 1.15e-21 | 56 |
regional part of nervous system | 2.09e-20 | 53 |
regional part of brain | 2.09e-20 | 53 |
regional part of forebrain | 1.76e-19 | 41 |
forebrain | 1.76e-19 | 41 |
anterior neural tube | 1.76e-19 | 41 |
future forebrain | 1.76e-19 | 41 |
brain grey matter | 3.26e-17 | 34 |
gray matter | 3.26e-17 | 34 |
telencephalon | 1.46e-16 | 34 |
cerebral hemisphere | 2.46e-16 | 32 |
regional part of telencephalon | 4.34e-16 | 32 |
nervous system | 9.00e-16 | 89 |
brain | 9.68e-16 | 68 |
future brain | 9.68e-16 | 68 |
central nervous system | 1.07e-15 | 81 |
regional part of cerebral cortex | 5.78e-14 | 22 |
hematopoietic system | 6.49e-13 | 98 |
blood island | 6.49e-13 | 98 |
cerebral cortex | 7.04e-13 | 25 |
pallium | 7.04e-13 | 25 |
neocortex | 8.93e-13 | 20 |
hemolymphoid system | 9.71e-12 | 108 |
neural plate | 7.31e-11 | 82 |
presumptive neural plate | 7.31e-11 | 82 |
neurectoderm | 2.41e-10 | 86 |
immune system | 2.72e-08 | 93 |
pre-chordal neural plate | 5.31e-08 | 61 |
bone marrow | 3.06e-07 | 76 |
bone element | 4.62e-07 | 82 |