FFCP PHASE1:Hg19::chr15:39881392..39881514,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:39881392..39881514,+ to FFCP PHASE1:Hg19::chr15:39881392..39881514,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:39881392..39881514,+ | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_at_chr15:39881392..39881514,+ | |||
|id=chr15:39881392..39881514,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.32e-18!180;CL:0000057!3.73e-16!75;CL:0002371!4.60e-15!591;CL:0000222!4.64e-15!119;CL:0000144!8.20e-12!625;CL:0000220!9.51e-12!246;CL:0002321!2.62e-11!248;CL:0000115!2.92e-11!35;CL:0002139!6.45e-11!24;CL:0000548!6.00e-10!679;CL:0000004!6.00e-10!679;CL:0000255!6.00e-10!679;CL:0000012!1.83e-09!682;CL:0002078!2.85e-09!44;CL:0000213!1.41e-08!57;CL:0000215!1.41e-08!57;CL:0000071!2.86e-08!18;CL:0002546!2.86e-08!18;CL:0000680!1.28e-07!57;CL:0000056!1.28e-07!57;CL:0000355!1.28e-07!57;CL:0000192!1.28e-07!42;CL:0000514!1.28e-07!42;CL:0002334!1.51e-07!12;CL:0000359!1.75e-07!32;CL:0002620!1.89e-07!23;CL:0000187!2.92e-07!54;CL:0000183!5.12e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.41e-12;24!CL:0000115;6.34e-11;36!CL:0000071;5.34e-09;18!CL:0002334;3.34e-08;12!CL:0000349;5.18e-08;19!CL:0002620;1.92e-07;23!CL:0000359;2.75e-07;32!CL:0002078;5.30e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.38e-16,76;CL:0000222,5.00e-14,121;CL:0000115,1.61e-12,36;CL:0002139,6.40e-12,24;CL:0002078,8.29e-10,45;CL:0002321,1.35e-09,250;CL:0000071,5.43e-09,18;CL:0002546,5.43e-09,18;CL:0002334,3.42e-08,12;CL:0000192,4.84e-08,43;CL:0000514,4.84e-08,43;CL:0000213,5.87e-08,58;CL:0000215,5.87e-08,58;CL:0000359,6.81e-08,32;CL:0000349,7.01e-08,19;CL:0000723,1.20e-07,433;CL:0000680,1.44e-07,58;CL:0000056,1.44e-07,58;CL:0000355,1.44e-07,58;CL:0002620,2.19e-07,23;CL:0000048,3.23e-07,427;CL:0000187,3.56e-07,55 | |||
|ontology_enrichment_development_v019=CL:0002546;5.34e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.22e-20!84;UBERON:0000055!2.23e-18!69;UBERON:0000468!3.75e-18!659;UBERON:0002049!1.65e-17!79;UBERON:0007798!1.65e-17!79;UBERON:0001981!5.94e-17!60;UBERON:0007500!5.94e-17!60;UBERON:0004537!5.94e-17!60;UBERON:0006965!5.94e-17!60;UBERON:0000467!1.22e-15!625;UBERON:0000480!1.55e-15!626;UBERON:0004535!1.91e-15!110;UBERON:0001009!2.03e-15!113;UBERON:0003914!5.64e-15!118;UBERON:0001637!1.08e-12!42;UBERON:0003509!1.08e-12!42;UBERON:0004572!1.08e-12!42;UBERON:0000926!4.03e-12!448;UBERON:0004120!4.03e-12!448;UBERON:0006603!4.03e-12!448;UBERON:0000490!5.48e-12!138;UBERON:0003102!1.48e-11!95;UBERON:0002199!3.63e-10!45;UBERON:0002416!3.63e-10!45;UBERON:0003081!3.93e-10!216;UBERON:0004573!8.01e-10!33;UBERON:0004571!8.01e-10!33;UBERON:0002100!2.82e-09!216;UBERON:0005256!3.95e-09!143;UBERON:0000486!4.61e-09!82;UBERON:0000914!9.19e-09!83;UBERON:0002329!9.19e-09!83;UBERON:0003077!9.19e-09!83;UBERON:0003059!9.19e-09!83;UBERON:0007282!9.19e-09!83;UBERON:0009618!9.19e-09!83;UBERON:0007285!9.19e-09!83;UBERON:0002097!1.65e-08!40;UBERON:0001986!2.86e-08!18;UBERON:0004638!2.86e-08!18;UBERON:0004852!2.86e-08!18;UBERON:0000487!4.69e-08!22;UBERON:0000923!6.50e-08!604;UBERON:0005291!6.50e-08!604;UBERON:0006598!6.50e-08!604;UBERON:0002532!6.50e-08!604;UBERON:0004923!8.25e-08!57;UBERON:0002050!1.01e-07!605;UBERON:0005423!1.01e-07!605;UBERON:0006914!1.74e-07!25;UBERON:0004290!2.82e-07!70;UBERON:0000922!4.39e-07!612;UBERON:0000947!8.50e-07!21;UBERON:0010191!8.50e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;5.83e-11;42!UBERON:0003509;5.83e-11;42!UBERON:0004572;5.83e-11;42!UBERON:0007500;2.52e-10;56!UBERON:0001981;2.52e-10;56!UBERON:0004537;2.52e-10;56!UBERON:0000055;2.57e-10;65!UBERON:0004573;1.23e-09;33!UBERON:0004571;1.23e-09;33!UBERON:0004638;5.34e-09;18!UBERON:0001986;5.34e-09;18!UBERON:0004852;5.34e-09;18!UBERON:0000487;5.43e-08;22!UBERON:0006914;1.38e-07;25!UBERON:0002199;1.43e-07;46!UBERON:0002416;1.43e-07;46!UBERON:0002049;1.98e-07;75!UBERON:0007798;1.98e-07;75!UBERON:0002097;2.42e-07;41!UBERON:0000947;4.32e-07;21!UBERON:0010191;4.32e-07;21 | |||
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|phase1_expression=154.063265621432,135.525631622992,77.3839678486882,97.0710994025365,48.2717981981471,88.9785294582376,81.0559610138594,13.2661173419635,2.61185628199839,3.44027511102112,4.18680700783456,7.20856528029568,17.4086205630779,1.11389717664042,2.31978163009541,20.842079540005,19.2862248967673,21.1789926212338,17.0776479576677,1.10808952269109,0,0.626909442956176,0,1.09499540058307,1.50651167513763,0,0,0,0.786728553697808,0,2.32224184974114,1.83884244895785,6.6265302131215,1.84877005083394,0,0,0,1.66198622559563,11.2304890583279,0.868043482863407,0.447830948479849,0,1.03030227053675,8.43309784921475,0.377875943688809,0.485168122375632,23.4753327274741,1.6446715520873,0.619412741790207,27.0430848782821,3.84241059793651,0.945928919554341,22.0637235671436,3.87290810150296,1.35426486594342,21.8361113869421,2.18324920046277,1.57306439111559,31.526640914203,8.02322567690234,2.55734850319616,13.8537546078421,1.79517291859469,0.852449501065388,42.6607580784018,4.53908179752912,5.60540024096017,19.8486445552827,3.65038042894141,1.08594422352558,40.5617666764357,2.94622108790052,1.26584954976354,0,0.212604299965044,0,1.12328631146495,4.35512989240368,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6284119788377,2.01210257911091,7.54389114876829,6.50590474292219,15.0401373190767,11.8774145547875,10.3387173116643,13.6257763684738,0.756278537312543,0.443458794925128,1.40535657109002,0.654895377488563,1.45718115317017,1.48313777113772,0,0,0,0.238490624305342,0,0,10.5344075904354,6.02164216574287,11.4556365530506,18.0898541415683,15.9409785759764,27.2366861520667,19.0185419548498,9.8198368484345,6.40379272836078,24.7693253445856,39.8801023938056,19.0068026429628,38.5618050926108,36.398644954241,59.9505041432502,16.6097494608388,8.98117490504679,7.54496919238259,1.53316637465883,14.2389848935219,8.24407847686833,0,0,5.23312862571041,86.9700915466807,43.1810044776217,22.1123331958075,49.335898768796,4.61068896857864,5.04609840128076,10.6748995729705,45.8801640055918,6.22422070799533,2.42479209725439,6.37501422142489,1.21085942115945,1.72852777344,0.234321431833797,1.24864030732128,3.99330275081114,2.39117888882882,0.469737994575059,0.161872944368132,0.280901613404497,2.65400422631361,1.47401180774122,3.09977343527296,52.2721257204104,73.6855449250099,0,2.87447256726495,0.336672227908132,0.625592599359821,3.87889761677856,14.0472838681868,41.3758524328677,32.4514207238249,4.76415169272088,84.3131287737651,45.2741664295363,37.5119465052424,24.9075609750054,31.224916359247,38.90372154689,32.0120992890335,26.3291078296375,32.3490857135179,30.5444866835379,33.8743627003662,23.1153861250901,51.1213813223925,16.2210878146501,13.3952867925285,6.1843473012255,15.2737827530867,7.1701148847251,0,0.132529768321485,0.116193942869518,0,0.252320850875628,0,32.8544017892614,70.7565032012174,34.5337303381201,19.9678209053751,7.21879481669586,1.77460200059766,1.01150814046861,0.723033089650446,1.21323370005633,1.96091499683166,0.71181185733329,1.07865046528132,0.588664395376038,0,22.8828190933641,18.231430594448,0.8231480226628,8.82052268313252,0,0,1.18157981336281,0,0.737930631258681,0.343135620597051,19.5355508027354,7.86812272803337,5.93120937228622,5.92566049014589,0,2.07986957055916,2.88662684050547,0.115930404975077,0.70445216541493,27.429625074604,31.9460003677861,44.3292174706614,1.58040879591855,0,0,0,0,4.68669169933885,30.2367830757947,9.78248170972467,8.41850113406774,5.23141089325132,6.13412286664338,1.97065295158377,0,0,0.288239906833923,0,0.507983154337352,0,0,3.4214489204541,2.15937734676979,0,0,0.448524337381443,1.30788020649984,0.51336800074665,3.87815147273333,0,3.381211010224,28.4553784745811,34.3224541807508,1.28603687131071,4.25547396069835,0.266422179016099,3.71742783511184,1.08524321078289,3.29296134712308,0,1.42156779497018,2.37585561880029,0,0.871533458600294,0,0,0,0,15.0963658959697,10.3375742250703,0,2.60606352001643,2.26023954805422,5.37182889719687,0,0,0,0.128343036279748,0.76228387266739,1.30139853857622,1.54657762555539,1.17261385734044,1.91381625495949,0,0,0.414415513436035,1.34960640891054,3.00102312635806,0.813795071099207,60.9354624285265,80.47147394752,46.0491051899089,52.1279296717574,18.9596042828463,38.6592756895174,9.31257641632544,4.64957918974806,6.26855173041791,28.7584763889354,0.587403472388222,1.02943027143257,1.6541442089831,0.215714200818617,1.06727557803444,19.7032921440069,18.3078983461547,16.0266855464731,118.595532137375,93.304879759142,114.509318528694,52.280772896326,100.806328066141,90.7216115249946,40.0728779401476,9.25258162815933,25.3913267197772,5.33826514089759,9.8658341544888,5.694308544538,1.45031339509947,51.3296563976409,4.05156351317944,6.42960909721798,3.82391452814106,10.8833264416322,0,0,0,1.46139224653261,0.633309773357254,11.3733384070897,9.69534120076139,17.2732732881711,83.2827164527562,1.08378575017541,0.501689773854853,0.764628819135115,0,0.671624264166535,0.438519753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| ||
|short_description=p@chr15:39881392..39881514,+ | |||
}} | }} |
Latest revision as of 01:16, 25 July 2015
Short description: | p@chr15:39881392..39881514, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39881392..39881514, + |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.38e-16 | 76 |
mesodermal cell | 5.00e-14 | 121 |
endothelial cell | 1.61e-12 | 36 |
endothelial cell of vascular tree | 6.40e-12 | 24 |
meso-epithelial cell | 8.29e-10 | 45 |
embryonic cell | 1.35e-09 | 250 |
blood vessel endothelial cell | 5.43e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.43e-09 | 18 |
preadipocyte | 3.42e-08 | 12 |
smooth muscle cell | 4.84e-08 | 43 |
smooth muscle myoblast | 4.84e-08 | 43 |
lining cell | 5.87e-08 | 58 |
barrier cell | 5.87e-08 | 58 |
vascular associated smooth muscle cell | 6.81e-08 | 32 |
extraembryonic cell | 7.01e-08 | 19 |
somatic stem cell | 1.20e-07 | 433 |
muscle precursor cell | 1.44e-07 | 58 |
myoblast | 1.44e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.44e-07 | 58 |
skin fibroblast | 2.19e-07 | 23 |
multi fate stem cell | 3.23e-07 | 427 |
muscle cell | 3.56e-07 | 55 |