FFCP PHASE1:Hg19::chr17:26662732..26662844,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:26662732..26662844,+ to FFCP PHASE1:Hg19::chr17:26662732..26662844,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7126 | |EntrezGene=7126 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11894 | |HGNC=11894 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z6M4 | |UniProt=B7Z6M4 | ||
|association_with_transcript=0bp_to_ENST00000544907_5end | |||
|cluster_id=chr17:26662732..26662844,+ | |||
|description=CAGE_peak_1_at_TNFAIP1_5end | |||
|id=chr17:26662732..26662844,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.85e-33!254;CL:0000220!3.20e-30!246;CL:0002321!3.49e-29!248;CL:0000222!1.42e-19!119;CL:0000213!1.08e-12!57;CL:0000215!1.08e-12!57;CL:0002078!6.24e-12!44;CL:0000115!3.53e-11!35;CL:0002139!1.07e-10!24;CL:0000076!1.33e-10!62;CL:0000359!1.35e-09!32;CL:0000192!5.24e-09!42;CL:0000514!5.24e-09!42;CL:1000449!7.16e-09!16;CL:0000183!1.23e-08!59;CL:1000497!6.49e-08!18;CL:0002518!6.49e-08!18;CL:0000071!2.13e-07!18;CL:0002546!2.13e-07!18;CL:0002681!2.67e-07!13;CL:0002584!2.67e-07!13;CL:0000187!5.42e-07!54;CL:0000055!5.78e-07!180;CL:0002077!5.79e-07!33;CL:0002076!8.15e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0002139;9.54e-11;24!CL:0000115;6.76e-10;36!CL:1000449;1.32e-09;15!CL:0000359;4.07e-09;32!CL:1000497;1.62e-08;17!CL:0002518;1.62e-08;17!CL:0002078;2.25e-08;45!CL:0000213;4.11e-08;58!CL:0000215;4.11e-08;58!CL:0002681;5.02e-08;12!CL:0002584;5.02e-08;12!CL:0000071;1.93e-07;18!CL:1000507;5.53e-07;10!CL:1000494;5.53e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.87e-33,253;CL:0002321,2.12e-29,250;CL:0000222,1.07e-19,121;CL:0000213,4.29e-13,58;CL:0000215,4.29e-13,58;CL:0002078,2.42e-12,45;CL:0000115,1.35e-11,36;CL:0002139,1.07e-10,24;CL:0000076,2.08e-10,63;CL:1000449,1.30e-09,15;CL:0000359,1.35e-09,32;CL:0000192,1.09e-08,43;CL:0000514,1.09e-08,43;CL:1000497,1.64e-08,17;CL:0002518,1.64e-08,17;CL:0002681,4.89e-08,12;CL:0002584,4.89e-08,12;CL:0000071,2.13e-07,18;CL:0002546,2.13e-07,18;CL:0002076,5.39e-07,42;CL:1000507,5.57e-07,10;CL:1000494,5.57e-07,10;CL:0000187,8.81e-07,55;CL:0002077,9.58e-07,34 | |||
|ontology_enrichment_development_v019=CL:0002546;1.93e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!5.86e-28!312;UBERON:0000483!1.53e-27!309;UBERON:0000477!1.12e-25!286;UBERON:0003914!9.71e-24!118;UBERON:0004111!2.32e-22!241;UBERON:0002049!8.14e-22!79;UBERON:0007798!8.14e-22!79;UBERON:0000481!8.62e-22!347;UBERON:0000475!3.18e-20!365;UBERON:0000467!4.46e-20!625;UBERON:0000480!9.28e-20!626;UBERON:0000468!1.12e-19!659;UBERON:0000025!1.29e-19!194;UBERON:0000055!2.40e-19!69;UBERON:0004872!1.53e-18!84;UBERON:0002100!1.63e-16!216;UBERON:0003104!2.41e-16!238;UBERON:0009142!2.41e-16!238;UBERON:0001981!4.32e-16!60;UBERON:0007500!4.32e-16!60;UBERON:0004537!4.32e-16!60;UBERON:0006965!4.32e-16!60;UBERON:0000064!5.32e-15!219;UBERON:0000490!8.04e-15!138;UBERON:0001009!3.89e-14!113;UBERON:0000923!1.34e-13!604;UBERON:0005291!1.34e-13!604;UBERON:0006598!1.34e-13!604;UBERON:0002532!1.34e-13!604;UBERON:0002050!1.48e-13!605;UBERON:0005423!1.48e-13!605;UBERON:0004535!2.56e-13!110;UBERON:0005256!2.96e-13!143;UBERON:0000922!2.31e-12!612;UBERON:0009569!3.45e-12!113;UBERON:0001637!6.58e-12!42;UBERON:0003509!6.58e-12!42;UBERON:0004572!6.58e-12!42;UBERON:0001048!2.36e-11!168;UBERON:0003103!7.46e-10!69;UBERON:0005177!4.09e-09!107;UBERON:0000062!4.71e-09!511;UBERON:0004573!5.11e-09!33;UBERON:0004571!5.11e-09!33;UBERON:0004211!7.16e-09!16;UBERON:0001285!7.16e-09!16;UBERON:0007684!7.16e-09!16;UBERON:0003220!7.16e-09!16;UBERON:0004208!7.16e-09!16;UBERON:0006554!9.61e-09!44;UBERON:0000353!9.83e-09!17;UBERON:0001008!1.57e-08!45;UBERON:0002417!4.19e-08!61;UBERON:0000916!4.19e-08!61;UBERON:0006555!4.22e-08!17;UBERON:0005103!4.22e-08!17;UBERON:0000083!4.22e-08!17;UBERON:0009201!4.22e-08!17;UBERON:0004819!4.22e-08!17;UBERON:0006553!4.22e-08!17;UBERON:0003074!4.22e-08!17;UBERON:0003060!4.22e-08!17;UBERON:0004119!4.83e-08!169;UBERON:0000925!4.83e-08!169;UBERON:0006595!4.83e-08!169;UBERON:0005172!7.74e-08!55;UBERON:0005173!7.74e-08!55;UBERON:0000487!1.02e-07!22;UBERON:0000466!1.50e-07!126;UBERON:0000080!1.68e-07!18;UBERON:0002120!1.68e-07!18;UBERON:0004875!1.68e-07!18;UBERON:0005721!1.68e-07!18;UBERON:0005754!1.68e-07!18;UBERON:0007297!1.68e-07!18;UBERON:0003887!1.98e-07!21;UBERON:0001986!2.13e-07!18;UBERON:0004638!2.13e-07!18;UBERON:0004852!2.13e-07!18;UBERON:0000058!2.56e-07!26;UBERON:0001225!2.67e-07!13;UBERON:0008987!2.67e-07!13;UBERON:0004876!3.00e-07!20;UBERON:0000486!6.95e-07!82;UBERON:0003064!7.17e-07!37;UBERON:0001851!7.41e-07!16;UBERON:0005085!8.78e-07!29 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;1.29e-10;74!UBERON:0006554;6.52e-10;30!UBERON:0001008;6.52e-10;30!UBERON:0000490;9.28e-10;33!UBERON:0000055;1.04e-09;65!UBERON:0006555;1.32e-09;15!UBERON:0004819;1.32e-09;15!UBERON:0001285;1.32e-09;15!UBERON:0007684;1.32e-09;15!UBERON:0007500;2.13e-09;56!UBERON:0001981;2.13e-09;56!UBERON:0004537;2.13e-09;56!UBERON:0002049;2.92e-09;75!UBERON:0007798;2.92e-09;75!UBERON:0000353;3.68e-09;15!UBERON:0001637;5.14e-09;42!UBERON:0003509;5.14e-09;42!UBERON:0004572;5.14e-09;42!UBERON:0004573;3.38e-08;33!UBERON:0004571;3.38e-08;33!UBERON:0001225;5.02e-08;12!UBERON:0008987;5.02e-08;12!UBERON:0002113;5.53e-08;24!UBERON:0011143;5.53e-08;24!UBERON:0000025;6.15e-08;93!UBERON:0000487;9.01e-08;22!UBERON:0004638;1.93e-07;18!UBERON:0001986;1.93e-07;18!UBERON:0004852;1.93e-07;18!UBERON:0001851;2.11e-07;15!UBERON:0000119;2.81e-07;139!UBERON:0000483;3.37e-07;136!UBERON:0004211;5.53e-07;10!UBERON:0009773;5.53e-07;10!UBERON:0001231;5.53e-07;10!UBERON:0004810;5.53e-07;10!UBERON:0006914;9.93e-07;25 | |||
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| ||
|short_description=p1@TNFAIP1 | |||
}} | }} |
Latest revision as of 05:08, 19 September 2015
Short description: | p1@TNFAIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TNFAIP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000544907_5end |
EntrezGene: | TNFAIP1 |
HGNC: | 11894 |
UniProt: | B7Z6M4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.87e-33 | 253 |
embryonic cell | 2.12e-29 | 250 |
mesodermal cell | 1.07e-19 | 121 |
lining cell | 4.29e-13 | 58 |
barrier cell | 4.29e-13 | 58 |
meso-epithelial cell | 2.42e-12 | 45 |
endothelial cell | 1.35e-11 | 36 |
endothelial cell of vascular tree | 1.07e-10 | 24 |
squamous epithelial cell | 2.08e-10 | 63 |
epithelial cell of nephron | 1.30e-09 | 15 |
vascular associated smooth muscle cell | 1.35e-09 | 32 |
smooth muscle cell | 1.09e-08 | 43 |
smooth muscle myoblast | 1.09e-08 | 43 |
kidney cell | 1.64e-08 | 17 |
kidney epithelial cell | 1.64e-08 | 17 |
kidney cortical cell | 4.89e-08 | 12 |
renal cortical epithelial cell | 4.89e-08 | 12 |
blood vessel endothelial cell | 2.13e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.13e-07 | 18 |
endo-epithelial cell | 5.39e-07 | 42 |
kidney tubule cell | 5.57e-07 | 10 |
nephron tubule epithelial cell | 5.57e-07 | 10 |
muscle cell | 8.81e-07 | 55 |
ecto-epithelial cell | 9.58e-07 | 34 |