FFCP PHASE1:Hg19::chr19:21512115..21512135,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:21512115..21512135,- to FFCP PHASE1:Hg19::chr19:21512115..21512135,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7562 | |EntrezGene=7562 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12945 | |HGNC=12945 | ||
|TSSclassifier=strong | |||
|UniProt=P17019 | |UniProt=P17019 | ||
|association_with_transcript=76bp_to_ENST00000356929,NM_021269,uc002npq.1,uc002npr.1,uc010ecs.1_5end | |||
|cluster_id=chr19:21512115..21512135,- | |||
|description=CAGE_peak_3_at_ZNF708_5end | |||
|id=chr19:21512115..21512135,- | |||
|ontology_enrichment_celltype=CL:0000763!2.64e-17!112;CL:0000049!2.64e-17!112;CL:0000037!9.07e-16!172;CL:0000566!9.07e-16!172;CL:0002032!2.08e-15!165;CL:0000837!2.08e-15!165;CL:0000988!2.34e-15!182;CL:0000766!3.46e-15!76;CL:0002057!4.77e-13!42;CL:0000557!1.48e-12!71;CL:0000860!3.71e-12!45;CL:0000738!5.45e-12!140;CL:0000839!1.13e-11!70;CL:0002194!6.46e-11!63;CL:0000576!6.46e-11!63;CL:0000040!6.46e-11!63;CL:0000559!6.46e-11!63;CL:0002009!1.68e-10!65;CL:0002031!2.00e-09!124;CL:0002087!2.50e-09!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.64e-14;33!CL:0002057;3.64e-14;33!CL:0000473;1.88e-10;39!CL:0000234;1.88e-10;39!CL:0000576;2.91e-10;48!CL:0000763;1.06e-08;100!CL:0000766;1.10e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,6.30e-20,108;CL:0000049,6.30e-20,108;CL:0000766,2.04e-18,72;CL:0000037,7.35e-18,168;CL:0002032,8.77e-18,161;CL:0000837,8.77e-18,161;CL:0000988,1.98e-17,177;CL:0000557,1.35e-15,67;CL:0000860,1.95e-14,42;CL:0002057,1.95e-14,42;CL:0000839,2.02e-14,66;CL:0000738,4.09e-14,136;CL:0002194,2.08e-13,59;CL:0000576,2.08e-13,59;CL:0000040,2.08e-13,59;CL:0000559,2.08e-13,59;CL:0002009,3.87e-13,61;CL:0000473,9.57e-13,48;CL:0000234,9.57e-13,48;CL:0002031,1.16e-11,120;CL:0002087,2.97e-11,115 | |||
|ontology_enrichment_development_v019=CL:0002057;2.59e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.03e-20!82;UBERON:0005743!6.44e-20!86;UBERON:0000073!1.30e-19!94;UBERON:0001016!1.30e-19!94;UBERON:0001049!2.16e-19!57;UBERON:0005068!2.16e-19!57;UBERON:0006241!2.16e-19!57;UBERON:0007135!2.16e-19!57;UBERON:0002780!2.17e-16!41;UBERON:0001890!2.17e-16!41;UBERON:0006240!2.17e-16!41;UBERON:0000955!8.64e-16!69;UBERON:0006238!8.64e-16!69;UBERON:0002616!1.59e-15!59;UBERON:0003080!2.91e-15!42;UBERON:0002020!3.78e-14!34;UBERON:0003528!3.78e-14!34;UBERON:0001893!6.86e-14!34;UBERON:0002791!1.63e-13!33;UBERON:0007023!1.90e-13!115;UBERON:0003075!3.06e-13!86;UBERON:0007284!3.06e-13!86;UBERON:0001869!1.13e-12!32;UBERON:0002346!6.76e-12!90;UBERON:0002619!2.92e-10!22;UBERON:0002371!9.29e-10!80;UBERON:0002390!1.10e-09!102;UBERON:0003061!1.10e-09!102;UBERON:0001474!1.35e-09!86;UBERON:0000956!1.69e-09!25;UBERON:0000203!1.69e-09!25;UBERON:0001950!2.32e-09!20;UBERON:0002193!2.90e-09!112;UBERON:0003056!3.11e-09!61;UBERON:0002405!9.42e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.33e-13;41!UBERON:0001890;4.33e-13;41!UBERON:0003528;6.41e-13;34!UBERON:0002020;6.41e-13;34!UBERON:0001893;7.21e-13;34!UBERON:0002791;1.43e-12;32!UBERON:0001869;2.21e-12;32!UBERON:0000073;4.75e-12;53!UBERON:0002616;4.75e-12;53!UBERON:0002619;1.37e-11;22!UBERON:0001950;1.60e-10;20!UBERON:0000956;4.63e-10;25!UBERON:0000203;4.63e-10;25!UBERON:0001017;2.64e-09;75!UBERON:0001016;2.46e-08;83!UBERON:0000955;1.07e-07;68!UBERON:0000125;4.12e-07;9!UBERON:0002308;4.12e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.13e-23,81;UBERON:0001016,9.71e-23,89;UBERON:0001049,3.06e-22,56;UBERON:0005068,3.06e-22,56;UBERON:0006241,3.06e-22,56;UBERON:0007135,3.06e-22,56;UBERON:0000073,2.55e-20,53;UBERON:0002616,2.55e-20,53;UBERON:0000955,4.32e-18,68;UBERON:0006238,4.32e-18,68;UBERON:0002780,1.12e-17,41;UBERON:0001890,1.12e-17,41;UBERON:0003080,1.12e-17,41;UBERON:0006240,1.12e-17,41;UBERON:0003075,2.97e-15,82;UBERON:0007284,2.97e-15,82;UBERON:0003528,4.08e-15,34;UBERON:0002020,4.08e-15,34;UBERON:0001893,7.91e-15,34;UBERON:0007023,8.41e-15,114;UBERON:0002791,9.55e-14,32;UBERON:0002346,1.09e-13,86;UBERON:0001869,1.85e-13,32;UBERON:0002390,4.27e-13,98;UBERON:0003061,4.27e-13,98;UBERON:0001474,1.28e-12,82;UBERON:0002193,1.58e-12,108;UBERON:0002371,1.99e-12,76;UBERON:0002405,6.03e-12,93;UBERON:0003056,1.06e-11,61;UBERON:0002619,1.69e-11,22;UBERON:0001950,1.80e-10,20;UBERON:0004765,6.47e-10,90;UBERON:0000956,7.11e-10,25;UBERON:0000203,7.11e-10,25;UBERON:0010371,7.76e-10,104;UBERON:0001434,8.65e-08,100;UBERON:0011216,4.04e-07,223;UBERON:0000125,4.89e-07,9;UBERON:0002308,4.89e-07,9 | |||
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| ||
|short_description=p3@ZNF708 | |||
}} | }} |
Latest revision as of 22:14, 16 September 2015
Short description: | p3@ZNF708 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ZNF708_5end |
Coexpression cluster: | NA |
Association with transcript: | 76bp_to_ENST00000356929, NM_021269, uc002npq.1, uc002npr.1, uc010ecs.1_5end |
EntrezGene: | ZNF708 |
HGNC: | 12945 |
UniProt: | P17019 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 6.30e-20 | 108 |
common myeloid progenitor | 6.30e-20 | 108 |
myeloid leukocyte | 2.04e-18 | 72 |
hematopoietic stem cell | 7.35e-18 | 168 |
hematopoietic oligopotent progenitor cell | 8.77e-18 | 161 |
hematopoietic multipotent progenitor cell | 8.77e-18 | 161 |
hematopoietic cell | 1.98e-17 | 177 |
granulocyte monocyte progenitor cell | 1.35e-15 | 67 |
classical monocyte | 1.95e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.95e-14 | 42 |
myeloid lineage restricted progenitor cell | 2.02e-14 | 66 |
leukocyte | 4.09e-14 | 136 |
monopoietic cell | 2.08e-13 | 59 |
monocyte | 2.08e-13 | 59 |
monoblast | 2.08e-13 | 59 |
promonocyte | 2.08e-13 | 59 |
macrophage dendritic cell progenitor | 3.87e-13 | 61 |
defensive cell | 9.57e-13 | 48 |
phagocyte | 9.57e-13 | 48 |
hematopoietic lineage restricted progenitor cell | 1.16e-11 | 120 |
nongranular leukocyte | 2.97e-11 | 115 |