FFCP PHASE1:Hg19::chr19:46806868..46806883,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:46806868..46806883,+ to FFCP PHASE1:Hg19::chr19:46806868..46806883,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64344 | |EntrezGene=64344 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15825 | |HGNC=15825 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002pel.2_5end | |||
|cluster_id=chr19:46806868..46806883,+ | |||
|description=CAGE_peak_3_at_HIF3A_5end | |||
|id=chr19:46806868..46806883,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002577;6.48e-11;3!CL:0002575;9.38e-08;2!CL:0000349;2.72e-07;19!CL:0002536;7.65e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,6.62e-11,3;CL:0002575,9.56e-08,2;CL:0000349,2.58e-07,19;CL:0002536,6.40e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!4.59e-40!59;UBERON:0000955!2.79e-38!69;UBERON:0006238!2.79e-38!69;UBERON:0001049!7.12e-38!57;UBERON:0005068!7.12e-38!57;UBERON:0006241!7.12e-38!57;UBERON:0007135!7.12e-38!57;UBERON:0001017!2.75e-37!82;UBERON:0005743!1.99e-36!86;UBERON:0007023!6.61e-35!115;UBERON:0000073!2.67e-34!94;UBERON:0001016!2.67e-34!94;UBERON:0003075!7.92e-34!86;UBERON:0007284!7.92e-34!86;UBERON:0002780!4.58e-33!41;UBERON:0001890!4.58e-33!41;UBERON:0006240!4.58e-33!41;UBERON:0003080!5.16e-32!42;UBERON:0002346!1.51e-31!90;UBERON:0002020!5.53e-30!34;UBERON:0003528!5.53e-30!34;UBERON:0001893!2.57e-29!34;UBERON:0002791!1.72e-28!33;UBERON:0001869!2.56e-27!32;UBERON:0003056!1.48e-25!61;UBERON:0000153!2.94e-24!129;UBERON:0007811!2.94e-24!129;UBERON:0004121!3.60e-23!169;UBERON:0000033!6.77e-23!123;UBERON:0000924!3.75e-22!173;UBERON:0006601!3.75e-22!173;UBERON:0000956!4.14e-22!25;UBERON:0000203!4.14e-22!25;UBERON:0002619!1.90e-19!22;UBERON:0001950!4.64e-17!20;UBERON:0000064!1.60e-14!219;UBERON:0000062!2.08e-12!511;UBERON:0001871!4.22e-11!7;UBERON:0000025!7.37e-10!194;UBERON:0002420!1.35e-09!9;UBERON:0007245!1.35e-09!9;UBERON:0010009!1.35e-09!9;UBERON:0010011!1.35e-09!9;UBERON:0000454!1.35e-09!9;UBERON:0002308!2.81e-09!9;UBERON:0000125!2.81e-09!9;UBERON:0004732!6.16e-09!13;UBERON:0000481!9.57e-09!347;UBERON:0005631!4.69e-08!14;UBERON:0000158!4.69e-08!14;UBERON:0002298!4.89e-08!8;UBERON:0004733!7.47e-08!12;UBERON:0002028!7.47e-08!12;UBERON:0007277!7.47e-08!12;UBERON:0001987!1.12e-07!4;UBERON:0004340!1.12e-07!4;UBERON:0000349!1.59e-07!5;UBERON:0000922!1.63e-07!612;UBERON:0000119!1.90e-07!312;UBERON:0003076!2.29e-07!15;UBERON:0003057!2.29e-07!15;UBERON:0000468!3.57e-07!659;UBERON:0000477!4.46e-07!286;UBERON:0009663!5.08e-07!7;UBERON:0000483!6.27e-07!309;UBERON:0004111!9.49e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;6.32e-14;4!UBERON:0000922;1.73e-13;49!UBERON:0002780;8.42e-13;41!UBERON:0001890;8.42e-13;41!UBERON:0000073;1.78e-11;53!UBERON:0002616;1.78e-11;53!UBERON:0002420;3.52e-11;9!UBERON:0007245;3.52e-11;9!UBERON:0010009;3.52e-11;9!UBERON:0010011;3.52e-11;9!UBERON:0000454;3.52e-11;9!UBERON:0003528;5.32e-11;34!UBERON:0002020;5.32e-11;34!UBERON:0002791;8.89e-11;32!UBERON:0000160;3.58e-10;17!UBERON:0005409;9.32e-10;22!UBERON:0001893;1.49e-09;34!UBERON:0001869;2.65e-09;32!UBERON:0000478;3.91e-09;24!UBERON:0002619;4.77e-09;22!UBERON:0001017;2.10e-08;75!UBERON:0001016;5.64e-08;83!UBERON:0000125;5.95e-08;9!UBERON:0002308;5.95e-08;9!UBERON:0001950;6.89e-08;20!UBERON:0000956;8.23e-08;25!UBERON:0000203;8.23e-08;25!UBERON:0000955;1.80e-07;68!UBERON:0001871;3.09e-07;6!UBERON:0000305;3.53e-07;7!UBERON:0000007;5.09e-07;2!UBERON:0001876;6.29e-07;2!UBERON:0002133;6.29e-07;2!UBERON:0001894;7.64e-07;7!UBERON:0009663;8.55e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000955,6.87e-18,68;UBERON:0006238,6.87e-18,68;UBERON:0000073,9.85e-17,53;UBERON:0002616,9.85e-17,53;UBERON:0002780,4.24e-16,41;UBERON:0001890,4.24e-16,41;UBERON:0003080,4.24e-16,41;UBERON:0006240,4.24e-16,41;UBERON:0001049,1.38e-15,56;UBERON:0005068,1.38e-15,56;UBERON:0006241,1.38e-15,56;UBERON:0007135,1.38e-15,56;UBERON:0001017,1.71e-15,81;UBERON:0001016,1.15e-14,89;UBERON:0003075,3.87e-14,82;UBERON:0007284,3.87e-14,82;UBERON:0001987,6.36e-14,4;UBERON:0004340,6.36e-14,4;UBERON:0005631,1.59e-13,14;UBERON:0000158,1.59e-13,14;UBERON:0003528,1.83e-13,34;UBERON:0002020,1.83e-13,34;UBERON:0002346,3.26e-13,86;UBERON:0007023,5.83e-13,114;UBERON:0011216,6.35e-13,223;UBERON:0002791,2.47e-12,32;UBERON:0003056,2.77e-12,61;UBERON:0001893,1.84e-11,34;UBERON:0002420,3.10e-11,9;UBERON:0007245,3.10e-11,9;UBERON:0010009,3.10e-11,9;UBERON:0010011,3.10e-11,9;UBERON:0000454,3.10e-11,9;UBERON:0010371,5.04e-11,104;UBERON:0004121,8.23e-11,171;UBERON:0000924,8.23e-11,171;UBERON:0006601,8.23e-11,171;UBERON:0005409,1.64e-10,25;UBERON:0001869,1.75e-10,32;UBERON:0000160,3.31e-10,17;UBERON:0000478,3.72e-09,24;UBERON:0002619,4.28e-09,22;UBERON:0010314,2.42e-08,132;UBERON:0001950,6.24e-08,20;UBERON:0003124,6.35e-08,7;UBERON:0000125,6.60e-08,9;UBERON:0002308,6.60e-08,9;UBERON:0000956,7.50e-08,25;UBERON:0000203,7.50e-08,25;UBERON:0001871,2.50e-07,6;UBERON:0000305,3.20e-07,7;UBERON:0001876,4.06e-07,2;UBERON:0002133,6.21e-07,2;UBERON:0000007,6.60e-07,2;UBERON:0009663,9.66e-07,7;UBERON:0001894,9.81e-07,7;UBERON:0006222,9.81e-07,7 | |||
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| ||
|short_description=p3@HIF3A | |||
}} | }} |
Latest revision as of 20:23, 18 September 2015
Short description: | p3@HIF3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HIF3A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc002pel.2_5end |
EntrezGene: | HIF3A |
HGNC: | 15825 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 6.62e-11 | 3 |
central nervous system pericyte | 9.56e-08 | 2 |
extraembryonic cell | 2.58e-07 | 19 |
amniotic epithelial cell | 6.40e-07 | 2 |