FFCP PHASE1:Hg19::chr1:234070964..234070965,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:234070964..234070965,+ to FFCP PHASE1:Hg19::chr1:234070964..234070965,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:234070964..234070965,+ | |||
|coexpression_cluster_id=C3951 | |||
|description=CAGE_peak_at_chr1:234070964..234070965,+ | |||
|id=chr1:234070964..234070965,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.42e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0002605;6.07e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,7.17e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.19e-13;3!UBERON:0010122;2.66e-10;2!UBERON:0001041;1.93e-08;30 | |||
|ontology_enrichment_disease=DOID:305!1.12e-15!106;DOID:0050687!3.79e-12!143 | |||
|ontology_enrichment_disease_v019=DOID:3908;1.13e-08;5!DOID:1324;2.40e-07;15!DOID:4556;4.77e-07;3!DOID:0050615;7.22e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:3908,1.99e-08,5;DOID:1324,2.80e-07,15;DOID:4556,7.17e-07,3;DOID:0050615,8.34e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.87e-34!57;UBERON:0005068!4.87e-34!57;UBERON:0006241!4.87e-34!57;UBERON:0007135!4.87e-34!57;UBERON:0002616!2.57e-29!59;UBERON:0002780!4.73e-29!41;UBERON:0001890!4.73e-29!41;UBERON:0006240!4.73e-29!41;UBERON:0003080!4.57e-28!42;UBERON:0005743!6.43e-27!86;UBERON:0000955!7.96e-27!69;UBERON:0006238!7.96e-27!69;UBERON:0001017!9.88e-27!82;UBERON:0002020!1.66e-26!34;UBERON:0003528!1.66e-26!34;UBERON:0001893!1.78e-26!34;UBERON:0002791!1.88e-25!33;UBERON:0001869!3.62e-25!32;UBERON:0000073!7.69e-25!94;UBERON:0001016!7.69e-25!94;UBERON:0003075!1.08e-24!86;UBERON:0007284!1.08e-24!86;UBERON:0002346!8.15e-23!90;UBERON:0003056!6.17e-20!61;UBERON:0000033!8.74e-20!123;UBERON:0000153!5.57e-18!129;UBERON:0007811!5.57e-18!129;UBERON:0000956!4.71e-17!25;UBERON:0000203!4.71e-17!25;UBERON:0004121!8.27e-16!169;UBERON:0007023!4.15e-15!115;UBERON:0000924!5.69e-15!173;UBERON:0006601!5.69e-15!173;UBERON:0001950!5.33e-14!20;UBERON:0002619!5.60e-14!22;UBERON:0000477!1.58e-12!286;UBERON:0000481!1.47e-11!347;UBERON:0000064!1.52e-11!219;UBERON:0002308!2.33e-11!9;UBERON:0000125!2.33e-11!9;UBERON:0004111!2.47e-10!241;UBERON:0009663!5.27e-10!7;UBERON:0002420!1.18e-09!9;UBERON:0007245!1.18e-09!9;UBERON:0010009!1.18e-09!9;UBERON:0010011!1.18e-09!9;UBERON:0000454!1.18e-09!9;UBERON:0000025!1.57e-09!194;UBERON:0000062!8.65e-09!511;UBERON:0000483!3.99e-08!309;UBERON:0000119!7.72e-08!312;UBERON:0000200!7.87e-08!6;UBERON:0003076!2.58e-07!15;UBERON:0003057!2.58e-07!15;UBERON:0000922!3.17e-07!612;UBERON:0001737!3.45e-07!9;UBERON:0000475!8.43e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002420;1.36e-24;9!UBERON:0007245;1.36e-24;9!UBERON:0010009;1.36e-24;9!UBERON:0010011;1.36e-24;9!UBERON:0000454;1.36e-24;9!UBERON:0009663;7.41e-24;7!UBERON:0002791;5.22e-23;32!UBERON:0001869;2.97e-22;32!UBERON:0003528;5.30e-21;34!UBERON:0002020;5.30e-21;34!UBERON:0001893;7.93e-21;34!UBERON:0000369;2.51e-19;4!UBERON:0002435;2.51e-19;4!UBERON:0000204;2.51e-19;4!UBERON:0000125;2.03e-18;9!UBERON:0002308;2.03e-18;9!UBERON:0002780;1.26e-16;41!UBERON:0001890;1.26e-16;41!UBERON:0005383;7.32e-15;3!UBERON:0005382;7.32e-15;3!UBERON:0000073;3.29e-14;53!UBERON:0002616;3.29e-14;53!UBERON:0000955;1.00e-11;68!UBERON:0001017;4.87e-11;75!UBERON:0001875;2.32e-10;2!UBERON:0006514;2.32e-10;2!UBERON:0001873;2.66e-10;2!UBERON:0001016;3.35e-10;83!UBERON:0000956;9.50e-10;25!UBERON:0000203;9.50e-10;25!UBERON:0001950;4.53e-07;20!UBERON:0002037;4.66e-07;6!UBERON:0001870;6.07e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002420,9.27e-25,9;UBERON:0007245,9.27e-25,9;UBERON:0010009,9.27e-25,9;UBERON:0010011,9.27e-25,9;UBERON:0000454,9.27e-25,9;UBERON:0009663,5.46e-24,7;UBERON:0002791,5.61e-24,32;UBERON:0001869,5.61e-24,32;UBERON:0000073,5.26e-23,53;UBERON:0002616,5.26e-23,53;UBERON:0003528,1.99e-22,34;UBERON:0002020,1.99e-22,34;UBERON:0001893,1.99e-22,34;UBERON:0001049,1.43e-21,56;UBERON:0005068,1.43e-21,56;UBERON:0006241,1.43e-21,56;UBERON:0007135,1.43e-21,56;UBERON:0000955,2.88e-21,68;UBERON:0006238,2.88e-21,68;UBERON:0002780,4.01e-21,41;UBERON:0001890,4.01e-21,41;UBERON:0003080,4.01e-21,41;UBERON:0006240,4.01e-21,41;UBERON:0000369,2.00e-19,4;UBERON:0002435,2.00e-19,4;UBERON:0000204,2.00e-19,4;UBERON:0010082,2.00e-19,4;UBERON:0000125,1.61e-18,9;UBERON:0002308,1.61e-18,9;UBERON:0001017,3.39e-17,81;UBERON:0001016,4.67e-15,89;UBERON:0005383,5.44e-15,3;UBERON:0005382,5.44e-15,3;UBERON:0003075,1.67e-13,82;UBERON:0007284,1.67e-13,82;UBERON:0003056,3.28e-13,61;UBERON:0002346,1.08e-12,86;UBERON:0011216,3.33e-12,223;UBERON:0001873,2.02e-10,2;UBERON:0001875,2.02e-10,2;UBERON:0006514,2.02e-10,2;UBERON:0010122,2.02e-10,2;UBERON:0010314,4.85e-10,132;UBERON:0000025,7.43e-10,192;UBERON:0010371,7.93e-10,104;UBERON:0000956,1.05e-09,25;UBERON:0000203,1.05e-09,25;UBERON:0004111,1.54e-07,240;UBERON:0002037,4.28e-07,6;UBERON:0006215,4.28e-07,6;UBERON:0001950,4.64e-07,20;UBERON:0001870,5.99e-07,3 | |||
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| ||
|short_description=p@chr1:234070964..234070965,+ | |||
}} | }} |
Latest revision as of 05:08, 28 July 2015
Short description: | p@chr1:234070964..234070965, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:234070964..234070965, + |
Coexpression cluster: | C3951_caudate_putamen_mucinous_large_clear_nucleus_bile |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 7.17e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
non-small cell lung carcinoma | 1.99e-08 | 5 |
lung cancer | 2.80e-07 | 15 |
lung large cell carcinoma | 7.17e-07 | 3 |
respiratory system cancer | 8.34e-07 | 16 |