FFCP PHASE1:Hg19::chr1:36948458..36948479,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:36948458..36948479,- to FFCP PHASE1:Hg19::chr1:36948458..36948479,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1441 | |EntrezGene=1441 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2439 | |HGNC=2439 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=20bp_to_ENST00000526980_5end | |||
|cluster_id=chr1:36948458..36948479,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_CSF3R_5end | |||
|id=chr1:36948458..36948479,- | |||
|ontology_enrichment_celltype=CL:0000766!2.77e-44!76;CL:0000763!1.78e-42!112;CL:0000049!1.78e-42!112;CL:0002194!9.04e-41!63;CL:0000576!9.04e-41!63;CL:0000040!9.04e-41!63;CL:0000559!9.04e-41!63;CL:0002009!8.65e-40!65;CL:0000037!4.13e-39!172;CL:0000566!4.13e-39!172;CL:0002057!4.07e-37!42;CL:0000839!4.41e-37!70;CL:0000557!7.77e-37!71;CL:0002032!8.87e-36!165;CL:0000837!8.87e-36!165;CL:0000738!1.21e-34!140;CL:0000988!1.55e-34!182;CL:0000860!2.95e-33!45;CL:0002087!5.05e-31!119;CL:0002031!9.62e-28!124;CL:0000094!8.13e-09!8;CL:0002393!2.34e-08!9;CL:0002397!2.34e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.63e-33;33!CL:0002057;3.63e-33;33!CL:0000473;4.22e-32;39!CL:0000234;4.22e-32;39!CL:0000576;1.43e-31;48!CL:0000766;3.27e-24;69!CL:0000763;1.22e-16;100!CL:0002087;1.99e-11;104!CL:0000094;2.00e-10;8!CL:0000738;9.87e-10;136!CL:0000988;1.26e-07;177!CL:0002393;1.46e-07;6!CL:0002397;1.46e-07;6!CL:0000081;6.60e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.12e-58,72;CL:0002194,1.81e-55,59;CL:0000576,1.81e-55,59;CL:0000040,1.81e-55,59;CL:0000559,1.81e-55,59;CL:0002009,6.82e-53,61;CL:0000473,2.29e-50,48;CL:0000234,2.29e-50,48;CL:0000763,7.81e-50,108;CL:0000049,7.81e-50,108;CL:0000557,4.01e-48,67;CL:0000839,3.80e-47,66;CL:0000860,4.70e-45,42;CL:0002057,4.70e-45,42;CL:0000037,8.57e-44,168;CL:0000738,3.21e-41,136;CL:0000988,9.67e-40,177;CL:0002032,9.94e-40,161;CL:0000837,9.94e-40,161;CL:0002087,2.08e-38,115;CL:0002031,1.16e-31,120;CL:0000094,2.00e-10,8;CL:0002393,7.28e-10,9;CL:0002397,7.28e-10,9;CL:0000081,6.60e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.11e-32;42!CL:0000049;2.08e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.11e-43!115;UBERON:0002390!2.32e-39!102;UBERON:0003061!2.32e-39!102;UBERON:0002193!3.76e-35!112;UBERON:0002371!3.81e-31!80;UBERON:0001474!3.77e-27!86;UBERON:0002405!3.70e-24!115;UBERON:0004765!7.25e-21!101;UBERON:0001434!7.25e-21!101;UBERON:0001049!3.89e-15!57;UBERON:0005068!3.89e-15!57;UBERON:0006241!3.89e-15!57;UBERON:0007135!3.89e-15!57;UBERON:0003080!1.23e-11!42;UBERON:0002616!1.83e-11!59;UBERON:0002780!3.10e-11!41;UBERON:0001890!3.10e-11!41;UBERON:0006240!3.10e-11!41;UBERON:0003081!4.31e-10!216;UBERON:0000955!4.61e-10!69;UBERON:0006238!4.61e-10!69;UBERON:0002020!8.24e-10!34;UBERON:0003528!8.24e-10!34;UBERON:0001017!8.52e-10!82;UBERON:0001893!8.66e-10!34;UBERON:0002791!1.70e-09!33;UBERON:0005743!2.82e-09!86;UBERON:0000178!8.87e-09!15;UBERON:0000179!8.87e-09!15;UBERON:0000463!8.87e-09!15;UBERON:0001869!8.99e-09!32;UBERON:0003075!1.34e-08!86;UBERON:0007284!1.34e-08!86;UBERON:0002346!5.07e-08!90;UBERON:0002204!1.25e-07!167;UBERON:0002619!1.54e-07!22;UBERON:0000073!4.11e-07!94;UBERON:0001016!4.11e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.43e-11;15!UBERON:0000179;8.43e-11;15!UBERON:0000463;8.43e-11;15!UBERON:0007023;4.02e-09;114!UBERON:0002390;2.41e-07;32!UBERON:0000073;9.29e-07;53!UBERON:0002616;9.29e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.09e-52,98;UBERON:0003061,3.09e-52,98;UBERON:0002193,1.92e-47,108;UBERON:0002371,1.96e-41,76;UBERON:0002405,2.71e-37,93;UBERON:0001474,1.04e-36,82;UBERON:0004765,1.99e-31,90;UBERON:0007023,3.11e-30,114;UBERON:0001434,5.05e-27,100;UBERON:0003081,2.90e-17,203;UBERON:0001049,2.50e-12,56;UBERON:0005068,2.50e-12,56;UBERON:0006241,2.50e-12,56;UBERON:0007135,2.50e-12,56;UBERON:0000073,7.53e-11,53;UBERON:0002616,7.53e-11,53;UBERON:0000178,8.54e-11,15;UBERON:0000179,8.54e-11,15;UBERON:0000463,8.54e-11,15;UBERON:0002204,3.47e-09,167;UBERON:0002780,4.60e-08,41;UBERON:0001890,4.60e-08,41;UBERON:0003080,4.60e-08,41;UBERON:0006240,4.60e-08,41;UBERON:0000955,5.14e-08,68;UBERON:0006238,5.14e-08,68;UBERON:0003528,1.34e-07,34;UBERON:0002020,1.34e-07,34;UBERON:0001893,1.41e-07,34;UBERON:0001017,1.54e-07,81;UBERON:0003075,5.73e-07,82;UBERON:0007284,5.73e-07,82;UBERON:0002420,8.22e-07,9;UBERON:0007245,8.22e-07,9;UBERON:0010009,8.22e-07,9;UBERON:0010011,8.22e-07,9;UBERON:0000454,8.22e-07,9;UBERON:0002791,9.54e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,71.9856626633494,56.8067509183875,93.8185707295421,0,0,0,0,0,27.8920417368105,167.306613376627,162.240458003345,142.142120318883,39.1852079919868,32.065472935879,47.3939044446903,131.149211379167,97.4919934717128,98.7317129034412,142.71142866009,104.847811445566,121.404897390881,148.736966830552,146.523924134646,111.619612507412,183.059956471144,132.324360134684,117.821043337077,145.511328466433,106.706304672618,73.0351324446525,184.262503207283,143.455275103014,144.490190430583,129.631560973379,140.222951308007,101.867715377314,197.922700744694,145.250617520932,120.204694056146,149.744204493019,148.622631749757,132.485195270121,166.484863224176,169.40771255428,118.04047051545,32.9558246646629,28.4889761953158,31.239138180748,135.805315056113,119.841160487522,128.741194944361,11.6855224933912,8.15558376516269,12.0558341484658,0,3.82297027883492,1.77901850772711,6.82768356106412,0.800791974072025,1.14950487990897,4.62731410949403,1.90810750907073,0,2.34894875748376,1.52909291250092,9.25199300053181,18.4967825783907,16.3298132560548,0.393419540227666,0,1.23360899399706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,3.50421955756506,0,0.950452044448374,5.27012916772205,2.8157054453972,2.49861453104692,12.0756398542449,0.821127996921047,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0.263504357079378,1.63723844372141,0,0,2.92092654289215,3.48259474598534,4.38761269712255,5.96226560763355,4.0039643754609,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,989.670934944835,992.717476219713,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.3603516270019,8.42415354501256,17.9843706369361,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.8922805154143,25.1128545716063,18.9750545534728,0,0,0,0,0,0,0,5.12279976525011,1.72502059887614,5.77543663258868,0.254094624222463,0,0,0,0,893.565379568989,759.870106378223,835.876090600484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.8348215380521,67.9499732578643,47.066852991319,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,29.4697293312486,0,0,0,0,0,0,0,0,0,0,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,25.7954014128375,0,0,0,0,238.50037633912,220.215515657004,292.229007020345,191.300115692605,225.837887924321,255.498484609931,203.051820401531,320.422571222885,0,0,0,0,0,0,0,4.39074617152197,2.10655907145603,2.32840940996271,32.137572087181,12.9166701932191,5.47763229679661,4.0736772900986,12.5317238545034,0,0.963528450622197,7.46658916606876,19.588926933755,10.9921710321845,5.22309299324379,5.14455048152557,5.67287081820489,11.3325095333183,0,0,0,0.33307196799782,0,0,3.95572084034114,0,0,0,0,0.890894042497916,0,2.98244294329889,3.09472716103128,0,0,0,1.79323189425963,0.828851746593443,0,0,0,0,0,0,8.69673029385682,1.57829449019094,59.8707730867349,0,1.93866549219044,1.94813006139888,1.99613798001194,0,0,2.17499872630438,0,0,0,0,0,0,2.65722415744152,2.65312164975897,1.52581736317083,1.21637185924347,1.18219047581419,0.438770794307945,0,0,1.23120413606075,0,11.9893230281791,8.07818799687949,0.54323685961004,1.5950057986596,0.274792780205587,2.13213910407454,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,1.06149077404007,0,0,0,0,4.51587590970536,0.802577647298789,2.81117334870407,0,0,0,0.789168805698781,1.20990716048664,0,10.9944648553569,0,0,0,0,0,0,0,0,0,0,0,2.44617335538842,0,0,0,0,0.969890164884194,0,0.90392296312213,0,0,1.39283751102933,0,0,2.56143593687223,0,0,0,0,0,0,1.41416420770077,0,0,0,0,3.00210144354895,4.51787750343577,33.2141128974128,0,0,1.39641200636127,0,5.0251111720377,1.39775300349294,0.858452096273142,7.58782955302367,2.95607278941596,0,0,0.393915911536118,0.494495150286999,0.202210631562555,0,0,3.18091875923721,3.67749196501254,0,0,0,0.2249738915515,0,1.57948847310864,0,1.10327990218877,1.25891011523995,0,0,0,4.2881719582402,3.31045985182716,0,0,0,0,0,0,0,0.113312091520126,2.93104467356165,3.97520666736664,1.42211251997706,3.83474545053801,0,0,18.901372024482,5.34494637338864,11.1844544943743,27.7852972214692,0,0.121792598380896,0,0,0.5013797880454,0,0,0,0,0.854183854313742,3.004582336956,2.86704597845036,5.65738162837947,4.65723022060376,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93561810612423,0,0,0.163565394255844,0,0,0,0,12.2695489148262,0,0,0,0,1.86623178009892,0,0,0,0,0.33946505990805,0,0,0,0,0,0,0,0,1.66995985250795,1.41696576325585,4.31011419454308,1.64093091392604,0.252071696221718,0.691572524642179,1.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| ||
|short_description=p2@CSF3R | |||
}} | }} |
Latest revision as of 21:28, 17 September 2015
Short description: | p2@CSF3R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CSF3R_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 20bp_to_ENST00000526980_5end |
EntrezGene: | CSF3R |
HGNC: | 2439 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.12e-58 | 72 |
monopoietic cell | 1.81e-55 | 59 |
monocyte | 1.81e-55 | 59 |
monoblast | 1.81e-55 | 59 |
promonocyte | 1.81e-55 | 59 |
macrophage dendritic cell progenitor | 6.82e-53 | 61 |
defensive cell | 2.29e-50 | 48 |
phagocyte | 2.29e-50 | 48 |
myeloid cell | 7.81e-50 | 108 |
common myeloid progenitor | 7.81e-50 | 108 |
granulocyte monocyte progenitor cell | 4.01e-48 | 67 |
myeloid lineage restricted progenitor cell | 3.80e-47 | 66 |
classical monocyte | 4.70e-45 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.70e-45 | 42 |
hematopoietic stem cell | 8.57e-44 | 168 |
leukocyte | 3.21e-41 | 136 |
hematopoietic cell | 9.67e-40 | 177 |
hematopoietic oligopotent progenitor cell | 9.94e-40 | 161 |
hematopoietic multipotent progenitor cell | 9.94e-40 | 161 |
nongranular leukocyte | 2.08e-38 | 115 |
hematopoietic lineage restricted progenitor cell | 1.16e-31 | 120 |
granulocyte | 2.00e-10 | 8 |
intermediate monocyte | 7.28e-10 | 9 |
CD14-positive, CD16-positive monocyte | 7.28e-10 | 9 |
blood cell | 6.60e-07 | 11 |