FFCP PHASE1:Hg19::chr20:55841662..55841736,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:55841662..55841736,- to FFCP PHASE1:Hg19::chr20:55841662..55841736,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=655 | |EntrezGene=655 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1074 | |HGNC=1074 | ||
|TSSclassifier=strong | |||
|UniProt=P18075,B1AL00,A8K571,B1AKZ9 | |UniProt=P18075,B1AL00,A8K571,B1AKZ9 | ||
|association_with_transcript=0bp_to_ENST00000395863,ENST00000450594,NM_001719,uc002xyc.2,uc010gip.1,uc010giq.1_5end | |||
|cluster_id=chr20:55841662..55841736,- | |||
|coexpression_cluster_id=C4050 | |||
|description=CAGE_peak_1_at_BMP7_5end | |||
|id=chr20:55841662..55841736,- | |||
|ontology_enrichment_celltype=CL:0002319!4.95e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;2.00e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.09e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.27e-12;82!UBERON:0002532;8.14e-08;206!UBERON:0010316;8.14e-08;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.81e-37!86;UBERON:0007023!1.04e-36!115;UBERON:0000073!1.67e-35!94;UBERON:0001016!1.67e-35!94;UBERON:0001017!6.07e-35!82;UBERON:0001049!2.15e-30!57;UBERON:0005068!2.15e-30!57;UBERON:0006241!2.15e-30!57;UBERON:0007135!2.15e-30!57;UBERON:0002346!2.26e-28!90;UBERON:0000955!7.16e-28!69;UBERON:0006238!7.16e-28!69;UBERON:0003075!3.22e-27!86;UBERON:0007284!3.22e-27!86;UBERON:0000924!9.44e-26!173;UBERON:0006601!9.44e-26!173;UBERON:0002616!6.68e-25!59;UBERON:0004121!1.38e-24!169;UBERON:0002780!6.82e-24!41;UBERON:0001890!6.82e-24!41;UBERON:0006240!6.82e-24!41;UBERON:0003080!6.21e-23!42;UBERON:0000153!4.83e-22!129;UBERON:0007811!4.83e-22!129;UBERON:0000033!4.97e-21!123;UBERON:0002020!5.46e-21!34;UBERON:0003528!5.46e-21!34;UBERON:0001893!6.54e-21!34;UBERON:0002791!2.40e-20!33;UBERON:0003056!2.39e-19!61;UBERON:0001869!2.67e-19!32;UBERON:0000064!1.09e-15!219;UBERON:0000956!4.38e-15!25;UBERON:0000203!4.38e-15!25;UBERON:0002619!8.53e-14!22;UBERON:0000062!6.20e-13!511;UBERON:0001950!2.10e-12!20;UBERON:0000468!1.12e-11!659;UBERON:0000922!2.42e-11!612;UBERON:0000475!7.71e-11!365;UBERON:0000481!1.61e-10!347;UBERON:0002050!9.04e-09!605;UBERON:0005423!9.04e-09!605;UBERON:0005409!9.78e-09!35;UBERON:0003076!1.47e-08!15;UBERON:0003057!1.47e-08!15;UBERON:0000923!1.86e-08!604;UBERON:0005291!1.86e-08!604;UBERON:0006598!1.86e-08!604;UBERON:0002532!1.86e-08!604;UBERON:0000480!2.54e-08!626;UBERON:0000467!4.62e-08!625;UBERON:0002308!2.07e-07!9;UBERON:0000125!2.07e-07!9;UBERON:0000160!2.15e-07!27;UBERON:0004732!2.64e-07!13;UBERON:0002420!5.94e-07!9;UBERON:0007245!5.94e-07!9;UBERON:0010009!5.94e-07!9;UBERON:0010011!5.94e-07!9;UBERON:0000454!5.94e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.52e-21;34!UBERON:0003528;1.57e-21;34!UBERON:0002020;1.57e-21;34!UBERON:0002791;3.49e-21;32!UBERON:0001869;5.86e-21;32!UBERON:0002780;3.03e-19;41!UBERON:0001890;3.03e-19;41!UBERON:0000073;1.19e-18;53!UBERON:0002616;1.19e-18;53!UBERON:0000956;6.26e-18;25!UBERON:0000203;6.26e-18;25!UBERON:0002619;2.37e-16;22!UBERON:0000922;3.00e-15;49!UBERON:0001950;1.12e-14;20!UBERON:0000955;5.33e-14;68!UBERON:0001017;1.19e-13;75!UBERON:0001016;1.20e-12;83!UBERON:0007023;1.08e-08;114!UBERON:0000125;1.17e-08;9!UBERON:0002308;1.17e-08;9!UBERON:0002420;4.36e-08;9!UBERON:0007245;4.36e-08;9!UBERON:0010009;4.36e-08;9!UBERON:0010011;4.36e-08;9!UBERON:0000454;4.36e-08;9!UBERON:0004732;1.38e-07;13!UBERON:0009663;7.07e-07;7!UBERON:0002298;7.63e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.58e-38,81;UBERON:0001016,5.30e-36,89;UBERON:0001049,1.59e-34,56;UBERON:0005068,1.59e-34,56;UBERON:0006241,1.59e-34,56;UBERON:0007135,1.59e-34,56;UBERON:0000073,7.37e-32,53;UBERON:0002616,7.37e-32,53;UBERON:0007023,7.69e-31,114;UBERON:0000955,1.25e-30,68;UBERON:0006238,1.25e-30,68;UBERON:0002346,8.50e-28,86;UBERON:0002780,1.83e-26,41;UBERON:0001890,1.83e-26,41;UBERON:0003080,1.83e-26,41;UBERON:0006240,1.83e-26,41;UBERON:0003075,2.56e-26,82;UBERON:0007284,2.56e-26,82;UBERON:0003528,3.39e-25,34;UBERON:0002020,3.39e-25,34;UBERON:0001893,4.22e-25,34;UBERON:0002791,2.22e-23,32;UBERON:0001869,3.87e-23,32;UBERON:0004121,1.89e-21,171;UBERON:0000924,1.89e-21,171;UBERON:0006601,1.89e-21,171;UBERON:0010371,1.81e-20,104;UBERON:0003056,4.31e-20,61;UBERON:0011216,1.77e-19,223;UBERON:0000956,5.23e-18,25;UBERON:0000203,5.23e-18,25;UBERON:0002619,1.94e-16,22;UBERON:0010314,3.29e-16,132;UBERON:0001950,9.60e-15,20;UBERON:0000922,3.54e-09,592;UBERON:0003076,3.96e-09,15;UBERON:0003057,3.96e-09,15;UBERON:0000125,1.12e-08,9;UBERON:0002308,1.12e-08,9;UBERON:0002420,4.01e-08,9;UBERON:0007245,4.01e-08,9;UBERON:0010009,4.01e-08,9;UBERON:0010011,4.01e-08,9;UBERON:0000454,4.01e-08,9;UBERON:0004732,1.23e-07,13;UBERON:0000025,6.83e-07,192;UBERON:0002298,6.92e-07,6;UBERON:0009663,6.95e-07,7;UBERON:0000489,9.97e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.61560529038394,0,3.13454721478088,6.01095572975219,3.42186062682211,6.90484517771415,0,0,0,0,0,0,0,0,0,146.103140294449,40.0917235614529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756278537312543,0.443458794925128,0.175669571386252,3.66741411393595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0.23486899728753,0,0.280901613404497,0,0.122834317311768,0,0,0,0,0,0,0.875829639103749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.1489499110331,16.5662210401857,14.0594670872117,17.3113961875669,17.662459561294,14.2341170039574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6999941532509,0.171567810298526,0.109750285408626,0,0.100528972411631,0.185176890317059,0,0,0,1.97081688457631,0,0,0,0,135.124952051036,118.471090369092,0,0,0,0,0,0,0,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80863626235752,0.871533458600294,0.99972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,16.2620559502377,11.712586847186,3.09315525111078,4.35542289869307,3.82763250991898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,10.9982099128376,0.200506470303285,0,0,0,0,4.96319574198153,5.85316561993552,7.0591479225917,1.46139224653261,1.26661954671451,0,0,0,0,1.89662506280697,7.02365683396795,0.254876273045038,1.66215201785745,0.895499018888713,0,0,19.4902095088456,0.656029291399411,4.55529752530024,7.62503486193145,0.366277859273374,0.82509499920588,0,0,0,0.096670718292122,0,0,0.275673144969061,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54907405947211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.32023627690114,0,0,0,0,0,0,0,0,0,0,0,0,22.1125827233869,16.3621575394771,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9488432172667,0,0,0,0,0,0.439524537815682,10.1942838269591,0,15.0592157807399,0.23874448473769,0,0,3.97659059106519,13.9262722246408,0,0,0,0.996239941255349,5.8019622261541,0,0,0,0,0,0,0,2.86065876347107,0,0,16.4786566836187,12.3381570555262,5.98841394003583,36.1994587908474,0,0,33.3414803476514,0,18.438239177899,6.89486746482929,0,1.21537496453305,10.6288966297661,16.1599227758047,6.10326945268333,3.98085335752409,2.65992857058193,12.2855822406225,0,47.2646493104465,7.07942378234933,0,0,0,9.12637924144868,0.957003479195758,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,70.5351826455365,0.432777279484182,3.98104772431402,0.707660516026713,3.05515072466813,17.7912677208373,43.000250753383,41.4555139536658,34.2397755541839,0.802577647298789,17.3355689836751,4.56136973039165,9.39190170874031,6.31228986788641,9.07544126553598,6.04953580243319,3.97894590119637,0.758238955541855,5.26131967950724,11.0946364795054,1.99396161812156,0.330991955875499,2.19753042885058,2.38944859545918,0,0,4.5125531967134,14.796852009571,0,22.8891935397059,0,0,0,0,14.5483524732629,0.529536760149002,17.8524785216621,0,0,9.4966193933818,27.1816422001376,0,2.56143593687223,11.1893381365993,20.3167488187289,14.7752209054031,0,0,0,13.9059480423909,3.80531777006119,3.765702467244,11.423800375268,0,7.80546375322726,10.4048087957915,0,0,24.1856365936969,2.79282401272254,1.60412296808179,0,25.1595540628729,0.858452096273142,0.446342914883745,25.1938021825223,0,20.9692709149417,0,0,0,0.0984274815147488,0,11.9284453471395,19.6132904800669,5.62636019627567,5.91419577368105,3.32352270423348,0.449947783103001,2.32140586367385,9.53768039530987,121.427356910934,1.81253126788156,32.8365721725088,0,0,0,5.00286728461357,1.32418394073086,0,0,0,0,0,0,0,1.92630555584214,0,0,19.6510093669557,15.338981802152,0.171086837884329,0.704815022316672,0.747511887973863,2.20086027139532,0.828478110694391,0.496166021811951,5.3355140612445,7.06397070609196,3.19170628885091,0,0.2506898940227,0,0.327872630709804,61.7222598263421,7.97461361970287,10.006153721961,9.26412887228099,17.7756850663922,19.4125840189492,21.4853554177187,29.3299106064809,0.249960815924213,0,4.85291067026445,0,22.9484103845372,60.4320689307141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0.150257608997218,0.380805212168795,0,0,0,0.464033759878494,0,0,0,0,0,0.963099152036517,0.428883182749851,0,0,0,0,0,1.85280868296583,0,0,0,0,0,0.345430341731199,0,10.3693827113798,0,0,0,0,0,0,15.7990042725395,0,0,0,0,0,0,0.127894371303652,1.50954735955355,0,16.8182842815701,11.3720795069197,2.33832412111851,0,0,0,0.23658523500376,0,0,3.3687002508852,10.5978221409158,2.8339315265117,9.57803154342908,9.64046911931549,2.01657356977374,10.5119023745611,10.9803439029659,38.5477434699717,15.1147486491579,17.1056098854224,8.07085833495388,2.4260389891571,0,13.1168385951419,8.35448132888354,1.50420656698514,0,0.781514011233092,0,0,0,9.52279943119365,9.37293718336617,9.714279435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| 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| ||
|short_description=p1@BMP7 | |||
}} | }} |
Latest revision as of 03:51, 17 September 2015
Short description: | p1@BMP7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BMP7_5end |
Coexpression cluster: | C4050_MCF7_Burkitt_keratoacanthoma_colon_small_synovial_peripheral |
Association with transcript: | 0bp_to_ENST00000395863, ENST00000450594, NM_001719, uc002xyc.2, uc010gip.1, uc010giq.1_5end |
EntrezGene: | BMP7 |
HGNC: | 1074 |
UniProt: | P18075B1AL00A8K571B1AKZ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.09e-07 | 25 |