FFCP PHASE1:Hg19::chr2:56410925..56410946,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:56410925..56410946,+ to FFCP PHASE1:Hg19::chr2:56410925..56410946,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=114800 | |EntrezGene=114800 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29400 | |HGNC=29400 | ||
|TSSclassifier=strong | |||
|UniProt=Q96PX6 | |UniProt=Q96PX6 | ||
|association_with_transcript=-311bp_to_ENST00000407595,NM_001080433,uc002rzn.2_5end | |||
|cluster_id=chr2:56410925..56410946,+ | |||
|coexpression_cluster_id=C1798 | |||
|description=CAGE_peak_5_at_CCDC85A_5end | |||
|id=chr2:56410925..56410946,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.29e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.02e-31!57;UBERON:0005068!1.02e-31!57;UBERON:0006241!1.02e-31!57;UBERON:0007135!1.02e-31!57;UBERON:0001893!1.79e-29!34;UBERON:0002020!1.94e-29!34;UBERON:0003528!1.94e-29!34;UBERON:0001869!1.98e-29!32;UBERON:0001017!7.60e-29!82;UBERON:0005743!1.78e-28!86;UBERON:0002619!3.09e-28!22;UBERON:0001950!4.20e-28!20;UBERON:0002616!5.34e-28!59;UBERON:0002791!8.00e-28!33;UBERON:0002780!1.85e-27!41;UBERON:0001890!1.85e-27!41;UBERON:0006240!1.85e-27!41;UBERON:0000955!2.78e-27!69;UBERON:0006238!2.78e-27!69;UBERON:0003080!1.31e-26!42;UBERON:0000073!8.36e-26!94;UBERON:0001016!8.36e-26!94;UBERON:0000956!3.15e-24!25;UBERON:0000203!3.15e-24!25;UBERON:0003075!1.03e-23!86;UBERON:0007284!1.03e-23!86;UBERON:0007023!4.52e-23!115;UBERON:0002346!4.06e-22!90;UBERON:0003056!9.10e-20!61;UBERON:0000033!8.47e-15!123;UBERON:0000025!1.35e-14!194;UBERON:0000153!1.45e-13!129;UBERON:0007811!1.45e-13!129;UBERON:0000200!1.83e-12!6;UBERON:0004121!1.58e-11!169;UBERON:0000924!5.65e-11!173;UBERON:0006601!5.65e-11!173;UBERON:0001872!1.42e-10!5;UBERON:0004111!1.42e-10!241;UBERON:0000483!4.47e-10!309;UBERON:0000119!8.18e-10!312;UBERON:0000477!1.48e-09!286;UBERON:0001871!5.82e-09!7;UBERON:0000475!1.97e-07!365;UBERON:0002771!3.82e-07!3;UBERON:0002021!4.53e-07!5;UBERON:0002308!8.45e-07!9;UBERON:0000125!8.45e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.89e-95;20!UBERON:0002619;5.31e-87;22!UBERON:0000956;9.17e-77;25!UBERON:0000203;9.17e-77;25!UBERON:0001869;3.66e-58;32!UBERON:0001893;1.74e-55;34!UBERON:0002791;1.34e-49;32!UBERON:0003528;9.23e-49;34!UBERON:0002020;9.23e-49;34!UBERON:0000200;1.45e-43;6!UBERON:0002780;1.90e-34;41!UBERON:0001890;1.90e-34;41!UBERON:0001872;5.99e-34;5!UBERON:0001871;3.98e-24;6!UBERON:0000073;1.58e-22;53!UBERON:0002616;1.58e-22;53!UBERON:0002771;4.36e-22;2!UBERON:0000955;3.02e-20;68!UBERON:0002021;9.85e-20;5!UBERON:0001017;1.38e-17;75!UBERON:0001870;4.59e-15;3!UBERON:0001016;2.06e-14;83!UBERON:0002581;1.01e-11;1!UBERON:0002902;1.01e-11;1!UBERON:0002022;1.01e-11;1!UBERON:0003112;1.01e-11;1!UBERON:0011158;1.01e-11;1!UBERON:0009899;1.01e-11;1!UBERON:0007190;1.01e-11;1!UBERON:0003128;1.01e-11;1!UBERON:0001703;1.01e-11;1!UBERON:0002241;1.01e-11;1!UBERON:0011216;3.68e-08;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.05e-95,20;UBERON:0002619,5.72e-87,22;UBERON:0000956,9.79e-77,25;UBERON:0000203,9.79e-77,25;UBERON:0001869,3.81e-69,32;UBERON:0001893,4.36e-65,34;UBERON:0002791,4.38e-60,32;UBERON:0003528,1.51e-56,34;UBERON:0002020,1.51e-56,34;UBERON:0002780,6.38e-54,41;UBERON:0001890,6.38e-54,41;UBERON:0003080,6.38e-54,41;UBERON:0006240,6.38e-54,41;UBERON:0000200,1.40e-43,6;UBERON:0000073,1.66e-41,53;UBERON:0002616,1.66e-41,53;UBERON:0000955,4.46e-41,68;UBERON:0006238,4.46e-41,68;UBERON:0001049,3.24e-39,56;UBERON:0005068,3.24e-39,56;UBERON:0006241,3.24e-39,56;UBERON:0007135,3.24e-39,56;UBERON:0001017,1.33e-38,81;UBERON:0003056,6.83e-36,61;UBERON:0001016,1.30e-34,89;UBERON:0001872,6.01e-34,5;UBERON:0003075,2.71e-26,82;UBERON:0007284,2.71e-26,82;UBERON:0002346,5.48e-25,86;UBERON:0001871,5.07e-24,6;UBERON:0002771,7.44e-22,2;UBERON:0010371,2.43e-20,104;UBERON:0002021,1.02e-19,5;UBERON:0007023,1.93e-18,114;UBERON:0010314,6.56e-18,132;UBERON:0004121,3.32e-17,171;UBERON:0000924,3.32e-17,171;UBERON:0006601,3.32e-17,171;UBERON:0001870,3.99e-15,3;UBERON:0011216,2.76e-14,223;UBERON:0007190,6.26e-12,1;UBERON:0002022,8.64e-12,1;UBERON:0002581,1.07e-11,1;UBERON:0002902,1.19e-11,1;UBERON:0009899,1.19e-11,1;UBERON:0003112,1.81e-11,1;UBERON:0011158,1.81e-11,1;UBERON:0003128,1.81e-11,1;UBERON:0001703,1.81e-11,1;UBERON:0002241,1.81e-11,1;UBERON:0004761,1.81e-11,1;UBERON:0009617,1.81e-11,1;UBERON:0000025,4.70e-10,192;UBERON:0004111,1.37e-07,240;UBERON:0002702,9.96e-07,2 | |||
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| ||
|short_description=p5@CCDC85A | |||
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Latest revision as of 18:28, 17 September 2015
Short description: | p5@CCDC85A |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CCDC85A_5end |
Coexpression cluster: | C1798_brain_temporal_medial_postcentral_insula_parietal_occipital |
Association with transcript: | -311bp_to_ENST00000407595, NM_001080433, uc002rzn.2_5end |
EntrezGene: | CCDC85A |
HGNC: | 29400 |
UniProt: | Q96PX6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data