FFCP PHASE1:Hg19::chr3:147111231..147111281,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:147111231..147111281,+ to FFCP PHASE1:Hg19::chr3:147111231..147111281,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7545 | |EntrezGene=7545 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12872 | |HGNC=12872 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=22bp_to_ENST00000472523_5end | |||
|cluster_id=chr3:147111231..147111281,+ | |||
|coexpression_cluster_id=C2723 | |||
|description=CAGE_peak_3_at_ZIC1_5end | |||
|id=chr3:147111231..147111281,+ | |||
|ontology_enrichment_celltype=CL:0002319!2.08e-12!25;CL:0000243!1.48e-09!15;CL:0000125!1.48e-09!15;CL:0000030!1.48e-09!15;CL:0000339!1.48e-09!15;CL:0002620!3.18e-09!23;CL:0000095!4.02e-09!17;CL:0000123!4.02e-09!17;CL:0000133!4.21e-09!59;CL:0000221!4.29e-07!71;CL:0000055!4.59e-07!180;CL:0000333!5.61e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0000243;3.91e-12;15!CL:0000125;3.91e-12;15!CL:0000095;8.89e-12;17!CL:0002319;1.25e-11;25!CL:0002620;2.52e-08;23!CL:0000128;6.16e-08;7!CL:0000126;6.16e-08;7!CL:0000127;6.16e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,2.91e-12,15;CL:0000125,2.91e-12,15;CL:0000030,2.91e-12,15;CL:0000339,2.91e-12,15;CL:0000095,7.95e-12,17;CL:0000123,7.95e-12,17;CL:0002319,1.15e-11,25;CL:0002620,2.36e-08,23;CL:0000133,3.30e-08,59;CL:0000128,4.78e-08,7;CL:0000126,4.78e-08,7;CL:0000127,4.78e-08,7;CL:0002453,4.78e-08,7;CL:0000221,2.22e-07,72;CL:0000333,2.58e-07,41 | |||
|ontology_enrichment_development_v019=CL:0000339;3.91e-12;15!UBERON:0006601;2.14e-08;82!UBERON:0006238;3.90e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;4.03e-07;5!DOID:450;4.03e-07;5!DOID:66;4.03e-07;5!DOID:423;4.03e-07;5!DOID:0080000;4.03e-07;5!DOID:11722;4.03e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.00e-07,5;DOID:450,4.00e-07,5;DOID:66,4.00e-07,5;DOID:423,4.00e-07,5;DOID:0080000,4.00e-07,5;DOID:11722,4.00e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001017!2.08e-47!82;UBERON:0000073!1.09e-46!94;UBERON:0001016!1.09e-46!94;UBERON:0005743!2.78e-45!86;UBERON:0000955!1.29e-39!69;UBERON:0006238!1.29e-39!69;UBERON:0002616!3.88e-35!59;UBERON:0001049!6.04e-33!57;UBERON:0005068!6.04e-33!57;UBERON:0006241!6.04e-33!57;UBERON:0007135!6.04e-33!57;UBERON:0004121!1.17e-26!169;UBERON:0003075!2.30e-26!86;UBERON:0007284!2.30e-26!86;UBERON:0000924!2.97e-25!173;UBERON:0006601!2.97e-25!173;UBERON:0002346!3.76e-24!90;UBERON:0002780!1.09e-21!41;UBERON:0001890!1.09e-21!41;UBERON:0006240!1.09e-21!41;UBERON:0000033!3.32e-21!123;UBERON:0003080!7.61e-21!42;UBERON:0000153!1.83e-20!129;UBERON:0007811!1.83e-20!129;UBERON:0003056!5.95e-19!61;UBERON:0001893!1.87e-17!34;UBERON:0002020!4.91e-17!34;UBERON:0003528!4.91e-17!34;UBERON:0002791!7.74e-17!33;UBERON:0001869!7.23e-16!32;UBERON:0003076!1.10e-13!15;UBERON:0003057!1.10e-13!15;UBERON:0007023!1.12e-13!115;UBERON:0000475!2.10e-13!365;UBERON:0004732!5.75e-12!13;UBERON:0004733!2.62e-11!12;UBERON:0002028!2.62e-11!12;UBERON:0007277!2.62e-11!12;UBERON:0000956!4.38e-11!25;UBERON:0000203!4.38e-11!25;UBERON:0002619!2.19e-09!22;UBERON:0002097!3.12e-09!40;UBERON:0002680!9.49e-09!9;UBERON:0001895!9.49e-09!9;UBERON:0010092!9.49e-09!9;UBERON:0000119!1.45e-08!312;UBERON:0001950!5.35e-08!20;UBERON:0002308!9.03e-08!9;UBERON:0000125!9.03e-08!9;UBERON:0000483!1.59e-07!309;UBERON:0002200!2.43e-07!11;UBERON:0006876!2.43e-07!11;UBERON:0002199!2.74e-07!45;UBERON:0002416!2.74e-07!45;UBERON:0002037!3.02e-07!6;UBERON:0006215!3.02e-07!6;UBERON:0009663!9.51e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001017;1.81e-19;75!UBERON:0000955;1.79e-17;68!UBERON:0000073;5.83e-17;53!UBERON:0002616;5.83e-17;53!UBERON:0001016;1.01e-16;83!UBERON:0004732;4.95e-15;13!UBERON:0002780;3.82e-14;41!UBERON:0001890;3.82e-14;41!UBERON:0004733;3.86e-14;12!UBERON:0002028;3.86e-14;12!UBERON:0003528;1.61e-13;34!UBERON:0002020;1.61e-13;34!UBERON:0001893;1.68e-13;34!UBERON:0002791;6.42e-13;32!UBERON:0001869;9.25e-13;32!UBERON:0002680;7.81e-11;9!UBERON:0001895;7.81e-11;9!UBERON:0000125;1.11e-09;9!UBERON:0002308;1.11e-09;9!UBERON:0006876;1.96e-09;11!UBERON:0002037;5.91e-09;6!UBERON:0009663;2.23e-08;7!UBERON:0000956;3.51e-08;25!UBERON:0000203;3.51e-08;25!UBERON:0005284;1.09e-07;5!UBERON:0011135;2.50e-07;5!UBERON:0002216;2.50e-07;5!UBERON:0011134;2.50e-07;5!UBERON:0002209;2.50e-07;5!UBERON:0002213;2.50e-07;5!UBERON:0007844;2.50e-07;5!UBERON:0011138;2.50e-07;5!UBERON:0001130;2.50e-07;5!UBERON:0001066;2.50e-07;5!UBERON:0001468;2.50e-07;5!UBERON:0002097;3.08e-07;41!UBERON:0011216;6.01e-07;132!UBERON:0002298;6.77e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.65e-49,89;UBERON:0001017,6.86e-48,81;UBERON:0000955,3.83e-43,68;UBERON:0006238,3.83e-43,68;UBERON:0001049,3.07e-34,56;UBERON:0005068,3.07e-34,56;UBERON:0006241,3.07e-34,56;UBERON:0007135,3.07e-34,56;UBERON:0000073,3.31e-31,53;UBERON:0002616,3.31e-31,53;UBERON:0003075,2.97e-30,82;UBERON:0007284,2.97e-30,82;UBERON:0004121,3.51e-28,171;UBERON:0000924,3.51e-28,171;UBERON:0006601,3.51e-28,171;UBERON:0002346,5.47e-28,86;UBERON:0010371,7.83e-28,104;UBERON:0003056,2.87e-20,61;UBERON:0002780,2.01e-19,41;UBERON:0001890,2.01e-19,41;UBERON:0003080,2.01e-19,41;UBERON:0006240,2.01e-19,41;UBERON:0010314,6.27e-19,132;UBERON:0003076,2.73e-17,15;UBERON:0003057,2.73e-17,15;UBERON:0001893,1.98e-15,34;UBERON:0011216,2.46e-15,223;UBERON:0004732,4.63e-15,13;UBERON:0003528,5.55e-15,34;UBERON:0002020,5.55e-15,34;UBERON:0004733,3.30e-14,12;UBERON:0002028,3.30e-14,12;UBERON:0007277,3.30e-14,12;UBERON:0002791,1.11e-13,32;UBERON:0001869,1.40e-13,32;UBERON:0002680,6.88e-11,9;UBERON:0001895,6.88e-11,9;UBERON:0010092,6.88e-11,9;UBERON:0007023,8.49e-11,114;UBERON:0000125,1.27e-09,9;UBERON:0002308,1.27e-09,9;UBERON:0006876,2.06e-09,11;UBERON:0000119,3.80e-09,309;UBERON:0002097,4.91e-09,41;UBERON:0002037,6.06e-09,6;UBERON:0006215,6.06e-09,6;UBERON:0009663,2.67e-08,7;UBERON:0000956,3.80e-08,25;UBERON:0000203,3.80e-08,25;UBERON:0000483,6.52e-08,306;UBERON:0005284,1.25e-07,5;UBERON:0002199,2.24e-07,46;UBERON:0002416,2.24e-07,46;UBERON:0011135,2.66e-07,5;UBERON:0002216,2.66e-07,5;UBERON:0011134,2.66e-07,5;UBERON:0002209,2.66e-07,5;UBERON:0002213,2.66e-07,5;UBERON:0005856,2.66e-07,5;UBERON:0005866,2.66e-07,5;UBERON:0005863,2.66e-07,5;UBERON:0007844,2.66e-07,5;UBERON:0011138,2.66e-07,5;UBERON:0001130,2.66e-07,5;UBERON:0001066,2.66e-07,5;UBERON:0001468,2.66e-07,5;UBERON:0002298,5.73e-07,6 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,7.92104658944298,9.27912652038164,0.672325146451775,0,0,0,13.4201953303699,9.38403179723564,6.58254915103984,3.72106783270374,4.51685602740518,1.63205431473244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,13.896618123118,11.3081992705908,10.0131655690164,0.654895377488563,0,0,0,0,0,0,0,0,0.993812036833525,0,0,1.13061588384802,2.09749718104953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0.560677600142307,0,0.24666754841716,0.622422070799533,0,0,28.3038389696022,19.58998143232,0,0.312160076830321,0,0,2.70099346880659,4.85618833104395,4.9157782345787,0,0,0.413303124703062,0,0,0,0,0,0,0,0,0,0,0,8.25192324168765,7.901623386287,5.93409323246773,11.1033705551229,6.08009922506789,9.27505944164265,7.258557396932,0,0.0974370051611986,9.59248342127635,8.10039108052234,0,16.3304412557643,7.65715946530066,0.169560592310488,0,0,0,0.121973706129595,0,0.929551542956147,4.04278114559945,0.252320850875628,0,4.69348596989448,21.8701918985581,2.76269842704961,6.96551892047969,7.94067429836544,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,2.53510069643662,7.86261773342101,0,0,0,3.60292401626904,0,0,0,0,0,0,2.88662684050547,9.62222361293138,3.17003474436719,0,0,0,7.90204397959275,17.1697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,40.2550592799845,27.4654843364966,17.8945417403118,0,14.3062578340753,0.845302752556,0,0,0,0,0,0,0,0,0.977208552881205,0,0,0,0,0,0,0,0,2.39624855491583,4.59447743336456,1.42636905040718,0.144781306667579,0.410952645100767,6.98337756635593,0,0,0,0,10.6719742173435,1.30139853857622,1.54657762555539,0.837581326671744,2.55175500661265,0,0,0,7.11610651971011,15.0051156317903,6.51036056879365,0,0,0,0,0,0,1.03473071292505,0,0.368738337083406,0.347534457872331,42.6846523268774,24.7063265143816,0,0,0,0,0,0,0,0.460385919864187,0.280660094433074,0,0,0,0,0,0,1.72467027628999,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,4.30376484646214,5.19809849499704,0,1.30012049207304,0,2.32009723901093,3.23502095940753,1.99554777143968,1.7918754422989,0.107420244868274,0.145016693914229,4.09087811597284,1.4245125703478,0,0,0,0,0,0,0,0,0,0,0,0,34.6107283504491,10.1241415909992,4.00323407240032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0.6196469961995,0,0,0,0,0,0,0.658589785919804,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96032172784825,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2847046008296,2.42159648629257,0,0,0,0,0,0,0,0,0,0,0,0,1.90460633053462,0,0,0,0.23874448473769,0,0,0,0.984685914873589,0,0,0,0.398495976502139,0,0,2.86352311006033,1.47701766553283,0,0,0,0,0,0,0,4.84666373047609,4.63840490809256,0,7.55240507147176,0,0,0,0,1.41832609060762,0,1.45802306691627,0,2.65722415744152,5.06505042226713,30.5163472634166,15.4810963903714,13.0040952339561,3.07139556015562,0,0,0,0,1.1528195219403,2.87224462111271,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0.0884575645033392,0,0.889563386041866,1.11207545051853,1.35748534357092,12.738814133348,1.60515529459758,3.98249557733077,0,0,0,0,0,0.91821828489147,6.95052375913368,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,8.59930162358083,0,0,0,0.0969890164884194,8.82561266915003,1.35588444468319,0,1.19228767021794,3.41878298161745,4.69323318563527,0,0,0,0,0,0,2.73704116177484,0,0,2.8539883275459,2.61507115780833,6.62988414636092,7.22376474753797,8.40588404193705,6.43455280792367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.592713324460491,5.56660782866512,6.94637371169036,0.160753148465019,0.137539436597234,0.83088067605837,0,0,0.728994679896296,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,6.47474482784602,5.32566830144591,4.54311924402056,0,3.36135686540031,1.45455861916959,0,0,0.106787412567695,0,0,0,1.18566979138767,0,1.27668251554036,0,0.7520696820681,0,0,0,3.54427271986794,0.122026264901963,5.75878281249899,12.0415931094915,7.87596265911651,5.40238705590036,4.42715631795939,2.37462775128003,0,0.285465333544967,0,0,1.01444720027578,0,0,0,0.189403005275089,1.0062716070103,1.77962244319307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80019435264208,2.06037423109676,3.03074539889327,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,3.03859956177382,0.414775308455192,0,0,0,0,0,0,0,0,2.41100971525142,0,0.552317850755522,0,0,0,17.5754442576591,0.943595651135378,0,0,0,0,1.67593475391973,0,0,3.20228299314188,0,0,4.49604575675217,2.8339315265117,2.07524016774297,0.615349092722265,1.00828678488687,3.04291910842559,5.32869630585109,4.28308260777463,0,0,0,0,0,1.3807198521202,0,0.0752103283492573,0.20170506870352,0,0,0,0,3.30934164630134,4.68646859168308,3.10030194751776,5.07326481551255,0,0,0,0,0,5.89272019466115,4.37168838884471,1.82089681270989,0.682986574053893,0,0,0,2.85472878502693,2.10472875401117,2.83665218121524,0,0.15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| ||
|short_description=p3@ZIC1 | |||
}} | }} |
Latest revision as of 18:06, 15 September 2015
Short description: | p3@ZIC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ZIC1_5end |
Coexpression cluster: | C2723_Pericytes_Meningeal_Smooth_Fibroblast_cerebellum_Hair_rhabdomyosarcoma |
Association with transcript: | 22bp_to_ENST00000472523_5end |
EntrezGene: | ZIC1 |
HGNC: | 12872 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 2.91e-12 | 15 |
glial cell | 2.91e-12 | 15 |
glioblast | 2.91e-12 | 15 |
glioblast (sensu Vertebrata) | 2.91e-12 | 15 |
neuron associated cell | 7.95e-12 | 17 |
neuron associated cell (sensu Vertebrata) | 7.95e-12 | 17 |
neural cell | 1.15e-11 | 25 |
skin fibroblast | 2.36e-08 | 23 |
neurectodermal cell | 3.30e-08 | 59 |
oligodendrocyte | 4.78e-08 | 7 |
macroglial cell | 4.78e-08 | 7 |
astrocyte | 4.78e-08 | 7 |
oligodendrocyte precursor cell | 4.78e-08 | 7 |
ectodermal cell | 2.22e-07 | 72 |
migratory neural crest cell | 2.58e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.00e-07 | 5 |
myotonic disease | 4.00e-07 | 5 |
muscle tissue disease | 4.00e-07 | 5 |
myopathy | 4.00e-07 | 5 |
muscular disease | 4.00e-07 | 5 |
myotonic dystrophy | 4.00e-07 | 5 |