FFCP PHASE1:Mm9::chr2:25947434..25947443,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=67991 | |EntrezGene=67991 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=283 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-95bp_to_ENSMUST00000152133_5end | |||
|cluster_id=chr2:25947434..25947443,- | |||
|description=CAGE_peak_11_at_Nacc2_5end | |||
|id=chr2:25947434..25947443,- | |||
|ontology_enrichment_celltype=CL:0002319!1.27e-17!43;CL:0000221!4.86e-17!44;CL:0000133!4.86e-17!44;CL:0000055!4.77e-14!50;CL:0000117!5.29e-14!23;CL:0000337!5.29e-14!23;CL:0000333!9.51e-11!10;CL:0000095!9.51e-11!10;CL:0000243!9.51e-11!10;CL:0000123!9.51e-11!10;CL:0000125!9.51e-11!10;CL:0000030!9.51e-11!10;CL:0000339!9.51e-11!10;CL:0000540!1.73e-09!33;CL:0000047!1.73e-09!33;CL:0000031!1.73e-09!33;CL:0000404!1.73e-09!33;CL:0002453!2.20e-09!8;CL:0002321!6.38e-08!70;CL:0000220!6.38e-08!70;CL:0000393!2.60e-07!39;CL:0000211!2.60e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,6.81e-12,8;CL:0002319,1.87e-10,43;CL:0000221,3.62e-10,44;CL:0000133,3.62e-10,44;CL:0000333,1.82e-09,10;CL:0000095,1.82e-09,10;CL:0000243,1.82e-09,10;CL:0000123,1.82e-09,10;CL:0000125,1.82e-09,10;CL:0000030,1.82e-09,10;CL:0000339,1.82e-09,10;CL:0000878,4.80e-09,2;CL:0000129,4.80e-09,2;CL:0000117,4.40e-07,23;CL:0000337,4.40e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.21e-31!75;UBERON:0001016!1.21e-31!75;UBERON:0001017!5.33e-30!73;UBERON:0005743!5.33e-30!73;UBERON:0001049!3.94e-25!52;UBERON:0005068!3.94e-25!52;UBERON:0006241!3.94e-25!52;UBERON:0007135!3.94e-25!52;UBERON:0000955!6.40e-21!50;UBERON:0006238!6.40e-21!50;UBERON:0004121!7.96e-21!102;UBERON:0000924!7.96e-21!102;UBERON:0006601!7.96e-21!102;UBERON:0002020!3.38e-20!34;UBERON:0002616!6.78e-20!49;UBERON:0002346!8.05e-17!71;UBERON:0003075!8.05e-17!71;UBERON:0007284!8.05e-17!71;UBERON:0003076!6.54e-15!12;UBERON:0003057!6.54e-15!12;UBERON:0000033!1.08e-14!63;UBERON:0002791!1.69e-14!29;UBERON:0003528!1.69e-14!29;UBERON:0001893!1.69e-14!29;UBERON:0003080!4.64e-13!40;UBERON:0002780!5.17e-12!39;UBERON:0001890!5.17e-12!39;UBERON:0006240!5.17e-12!39;UBERON:0000956!4.14e-10!21;UBERON:0001869!4.14e-10!21;UBERON:0000203!4.14e-10!21;UBERON:0002298!1.16e-09!6;UBERON:0003056!1.73e-09!49;UBERON:0002619!1.74e-09!17;UBERON:0002240!2.78e-09!6;UBERON:0005174!2.78e-09!6;UBERON:0001137!2.78e-09!6;UBERON:0007811!1.91e-08!86;UBERON:0000153!2.12e-08!94;UBERON:0001948!9.42e-08!5;UBERON:0002315!9.42e-08!5;UBERON:0004733!3.21e-07!6;UBERON:0004732!3.21e-07!6;UBERON:0002028!3.21e-07!6;UBERON:0007277!3.21e-07!6;UBERON:0000025!7.44e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.61e-24,73;UBERON:0001016,5.17e-23,75;UBERON:0003076,5.25e-20,12;UBERON:0003057,5.25e-20,12;UBERON:0000073,3.15e-19,54;UBERON:0001049,6.93e-18,52;UBERON:0005068,6.93e-18,52;UBERON:0006241,6.93e-18,52;UBERON:0007135,6.93e-18,52;UBERON:0004121,2.18e-17,95;UBERON:0000924,2.18e-17,95;UBERON:0006601,2.18e-17,95;UBERON:0004733,2.87e-16,6;UBERON:0004732,2.87e-16,6;UBERON:0002028,2.87e-16,6;UBERON:0007277,2.87e-16,6;UBERON:0002346,6.07e-14,64;UBERON:0003075,6.07e-14,64;UBERON:0007284,6.07e-14,64;UBERON:0002616,2.57e-13,46;UBERON:0000955,5.60e-13,47;UBERON:0006238,5.60e-13,47;UBERON:0010371,7.80e-12,73;UBERON:0002037,2.67e-09,4;UBERON:0002680,2.67e-09,4;UBERON:0001895,2.67e-09,4;UBERON:0010092,2.67e-09,4;UBERON:0006215,2.67e-09,4;UBERON:0001896,5.73e-09,2;UBERON:0002298,5.73e-09,2;UBERON:0005290,5.73e-09,2;UBERON:0010096,5.73e-09,2;UBERON:0002950,7.36e-09,4;UBERON:0001891,7.36e-09,4;UBERON:0009616,7.36e-09,4;UBERON:0010286,7.36e-09,4;UBERON:0010314,9.84e-09,92;UBERON:0002020,2.83e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8343270329458,1.09843091367236,0.777719596297134,0.839918529752175,1.43752564364972,0,0,0,0,0,0,0.202316460859598,0,1.26766280701236,0.338844532069132,0,0,0,0,1.79760066311043,3.84218305321555,0.414758449233911,0,0,2.57085885963423,0.883474163806454,0.489963196859816,0.0958454710182364,0,0,2.42605942361857,1.0752457327937,0.131886287730194,0.0914876436024097,0,1.11673199600552,1.68828783009504,0.61119299110724,1.47314292736834,0.711858403995515,0.372798891650601,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,1.75668478206928,1.46612694769419,0,0,0,0,1.79748767285787,0.915001205637253,0,1.21677024134594,1.27857728665165,1.87009240103604,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,2.56880943980467,2.10981035865966,0.163934945376675,0,0,0,0.215423397732799,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,3.33765543618917,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,1.38097570952153,0,1.20297227640581,0.685082519770642,0,1.35004500046361,0.900642406448441,0.453142408984205,0,0,0,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0,0,0.25347929989024,0.188626341386076,0,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8343270329458,1.09843091367236,0.777719596297134,0.839918529752175,1.43752564364972,0,0,0,0,0,0,0.202316460859598,0,1.26766280701236,0.338844532069132,0,0,0,0,1.79760066311043,3.84218305321555,0.414758449233911,0,0,2.57085885963423,0.883474163806454,0.489963196859816,0.0958454710182364,0,0,2.42605942361857,1.0752457327937,0.131886287730194,0.0914876436024097,0,1.11673199600552,1.68828783009504,0.61119299110724,1.47314292736834,0.711858403995515,0.372798891650601,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,1.75668478206928,1.46612694769419,0,0,0,0,1.79748767285787,0.915001205637253,0,1.21677024134594,1.27857728665165,1.87009240103604,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,2.56880943980467,2.10981035865966,0.163934945376675,0,0,0,0.215423397732799,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,3.33765543618917,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,1.38097570952153,0,1.20297227640581,0.685082519770642,0,1.35004500046361,0.900642406448441,0.453142408984205,0,0,0,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0,0,0.25347929989024,0.188626341386076,0,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p11@Nacc2 | |||
}} | }} |
Latest revision as of 10:46, 26 September 2015
Short description: | p11@Nacc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Nacc2_5end |
Coexpression cluster: | MCL_coexpression_mm9:283 |
Association with transcript: | -95bp_to_ENSMUST00000152133_5end |
EntrezGene: | Nacc2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 6.81e-12 | 8 |
neural cell | 1.87e-10 | 43 |
ectodermal cell | 3.62e-10 | 44 |
neurectodermal cell | 3.62e-10 | 44 |
migratory neural crest cell | 1.82e-09 | 10 |
neuron associated cell | 1.82e-09 | 10 |
glial cell (sensu Vertebrata) | 1.82e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 1.82e-09 | 10 |
glial cell | 1.82e-09 | 10 |
glioblast | 1.82e-09 | 10 |
glioblast (sensu Vertebrata) | 1.82e-09 | 10 |
central nervous system macrophage | 4.80e-09 | 2 |
microglial cell | 4.80e-09 | 2 |
CNS neuron (sensu Vertebrata) | 4.40e-07 | 23 |
neuroblast (sensu Vertebrata) | 4.40e-07 | 23 |