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(Created page with "{{f5samples |id=FF:10040-101F4 |name=frontal lobe, adult, pool1 |sample_id=10040 |rna_tube_id=101F4 |rna_box=101 |rna_position=F4 |sample_cell_lot=NA |sample_cell_cata...")
 
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{{f5samples
{{f5samples
|id=FF:10040-101F4
|DRA_sample_Accession=CAGE@SAMD00005272
|name=frontal lobe, adult, pool1
|accession_numbers=CAGE;DRX008656;DRR009528;DRZ000953;DRZ002338;DRZ012303;DRZ013688
|sample_id=10040
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000955,UBERON:0001870,UBERON:0000956,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0000073,UBERON:0000477,UBERON:0003528,UBERON:0002791,UBERON:0000467,UBERON:0002619,UBERON:0001062,UBERON:0000480,UBERON:0002616,UBERON:0002780,UBERON:0002020,UBERON:0010317,UBERON:0001017,UBERON:0001016,UBERON:0001869,UBERON:0001893,UBERON:0001890,UBERON:0000203,UBERON:0001950
|rna_tube_id=101F4
|rna_box=101
|rna_position=F4
|sample_cell_lot=NA
|sample_cell_catalog=NA
|sample_company=Clontech
|rna_lot_number=8121115A
|rna_catalog_number=Cat:636563
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=32-61 years old adult
|sample_tissue=frontal lobe
|sample_donor(cell lot)=4 pool
|sample_sex=mixed
|sample_age=
|sample_ethnicity=C
|rna_rin=
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=normal
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_weight_ug=50.00000
|rna_concentration=
|sample_note=
|profile_hcage=CNhs10647,LSID658,release008,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=
|ancestors_in_cell_lineage_facet=
|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000033,UBERON:0000061,UBERON:0000062,UBERON:0000064,UBERON:0000073,UBERON:0000153,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000922,UBERON:0000923,UBERON:0000924,UBERON:0000955,UBERON:0000956,UBERON:0001016,UBERON:0001017,UBERON:0001049,UBERON:0001062,UBERON:0001869,UBERON:0001870,UBERON:0001890,UBERON:0001893,UBERON:0001950,UBERON:0002050,UBERON:0002346,UBERON:0002532,UBERON:0002616,UBERON:0002619,UBERON:0002780,UBERON:0002791,UBERON:0003056,UBERON:0003075,UBERON:0003080,UBERON:0004121,UBERON:0005068,UBERON:0005291,UBERON:0005423,UBERON:0005743,UBERON:0006598,UBERON:0007023,UBERON:0007135,UBERON:0007284
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010040
 
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr7:100065686..100065701,-!p2@TSC22D4!2.47!296.99!TSC22D4;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!2.38!237.10!PEG3;;chr21:34442439..34442455,+!p1@OLIG1!2.33!213.48!OLIG1;;chr22:38380543..38380569,-!p1@SOX10!2.09!121.49!SOX10;;chr9:114287433..114287513,+!p1@ZNF483!2.07!289.84!ZNF483;;chr9:77112244..77112262,+!p1@RORB!2.07!129.03!RORB;;chr17:53342311..53342400,+!p1@HLF!2.06!128.58!HLF;;chr4:57547454..57547469,-!p1@HOPX!1.96!90.03!HOPX;;chr21:34398234..34398250,+!p1@OLIG2!1.90!78.25!OLIG2;;chr11:61520075..61520136,+!p1@C11orf9!1.89!158.97!C11orf9;;chr5:88178983..88179012,-!p1@MEF2C!1.87!534.85!MEF2C;;chr2:2334997..2335053,-!p1@MYT1L!1.85!70.21!MYT1L;;chr2:166326200..166326216,+!p1@CSRNP3!1.84!99.08!CSRNP3;;chr10:64134120..64134183,+!p1@ZNF365!1.84!80.53!ZNF365;;chr15:80733570..80733659,+!p2@ARNT2!1.83!65.91!ARNT2;;chr14:29235961..29236008,+!p1@FOXG1!1.82!65.53!FOXG1;;chr17:37764128..37764258,-!p1@NEUROD2!1.78!59.32!NEUROD2;;chr17:38821373..38821440,-!p1@KRT222,p2@SMARCE1!1.76!57.17!SMARCE1;;chr8:40755333..40755352,-!p1@ZMAT4!1.76!56.98!ZMAT4;;chr2:145277882..145277967,-!p3@ZEB2!1.74!90.72!ZEB2;;chr7:31380292..31380351,-!p1@NEUROD6!1.74!53.81!NEUROD6;;chr2:162272785..162272836,+!p1@TBR1!1.74!53.62!TBR1;;chr2:95963052..95963106,+!p1@KCNIP3!1.73!52.29!KCNIP3;;chr15:80735246..80735321,+!p3@ARNT2!1.71!50.21!ARNT2;;chr3:181429704..181429722,+!p1@SOX2!1.71!49.83!SOX2;;chr8:53322304..53322340,-!p1@ST18!1.66!44.32!ST18;;chr18:53070846..53070902,-!p6@TCF4!1.64!42.99!TCF4;;chr4:81118647..81118666,+!p1@PRDM8!1.61!52.29!PRDM8;;chr21:34442540..34442560,+!p2@OLIG1!1.57!36.21!OLIG1;;chr5:88179017..88179046,-!p2@MEF2C!1.56!135.68!MEF2C;;chr19:13135582..13135600,+!p3@NFIX!1.56!35.20!NFIX;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.55!34.63!POU3F3;;chr12:26277817..26277863,-!p2@BHLHE41!1.54!45.33!BHLHE41;;chr19:13135386..13135435,+!p4@NFIX!1.54!34.00!NFIX;;chrX:25034067..25034088,-!p1@ARX!1.49!30.01!ARX;;chr3:181429741..181429767,+!p2@SOX2!1.49!29.95!SOX2;;chr11:125034640..125034655,+!p1@PKNOX2!1.46!27.86!PKNOX2;;chr14:29236269..29236285,+!p3@FOXG1!1.46!27.67!FOXG1;;chr2:95963120..95963136,+!p2@KCNIP3!1.46!27.54!KCNIP3;;chr19:57352109..57352153,-!p2@ZIM2!1.45!27.16!ZIM2;;chr15:80696703..80696754,+!p1@ARNT2!1.44!35.07!ARNT2;;chr14:29234581..29234601,+!p2@FOXG1!1.43!25.83!FOXG1;;chr2:166428839..166428859,+!p2@CSRNP3!1.42!25.51!CSRNP3;;chr16:1031762..1031781,+!p1@SOX8!1.42!25.45!SOX8;;chr22:41763452..41763466,+!p2@TEF!1.41!24.94!TEF;;chr2:60781201..60781258,-!p3@BCL11A!1.41!24.56!BCL11A;;chr14:33403881..33403924,+!p1@NPAS3!1.41!24.50!NPAS3;;chr7:63505799..63505904,+!p1@ZNF727!1.40!24.31!ZNF727;;chrX:85969626..85969664,+!p1@DACH2!1.40!23.93!DACH2;;chr14:58798013..58798071,+!p2@ARID4A!1.39!23.42!ARID4A;;chr19:38085768..38085821,+!p1@ZNF540!1.38!34.31!ZNF540;;chr4:57522166..57522260,-!p2@HOPX!1.38!26.46!HOPX;;chr1:244214577..244214593,+!p1@ZNF238!1.37!22.67!ZNF238;;chr11:113930425..113930471,+!p1@ZBTB16!1.36!31.66!ZBTB16;;chr3:24536253..24536328,-!p1@THRB!1.34!39.00!THRB;;chr1:151032860..151032918,+!p1@MLLT11!1.33!236.85!MLLT11;;chr11:8102846..8102892,+!p1@TUB!1.32!27.79!TUB;;chr2:162272889..162272915,+!p2@TBR1!1.29!18.61!TBR1;;chr12:106976774..106976788,+!p1@RFX4!1.29!18.42!RFX4;;chr12:54779511..54779577,-!p5@ZNF385A!1.29!18.30!ZNF385A;;chr19:38720294..38720348,-!p1@DPF1!1.27!22.10!DPF1;;chr8:53322347..53322378,-!p2@ST18!1.27!17.66!ST18;;chr10:134599649..134599653,-!p1@NKX6-2!1.26!17.09!NKX6-2;;chr1:214161272..214161322,+!p1@PROX1!1.25!23.61!PROX1;;chr6:15401104..15401166,+!p5@JARID2!1.25!16.84!JARID2;;chr10:64133862..64133884,+!p4@ZNF365!1.24!16.52!ZNF365;;chrY:21906594..21906622,-!p1@KDM5D!1.24!16.52!KDM5D;;chr6:19837592..19837621,+!p1@ID4!1.23!95.60!ID4;;chr10:48355030..48355090,+!p1@ZNF488!1.23!20.70!ZNF488;;chrX:118739835..118739862,-!p1@NKRF!1.23!17.60!NKRF;;chr19:46801639..46801699,+!p1@HIF3A!1.23!15.95!HIF3A;;chr17:7492684..7492778,-!p2@SOX15!1.22!32.61!SOX15;;chr3:141105705..141105770,+!p4@ZBTB38!1.22!18.87!ZBTB38;;chr12:106976678..106976708,+!p2@RFX4!1.21!15.26!RFX4;;chr1:2461692..2461710,-!p1@HES5!1.21!15.07!HES5;;chr9:126774018..126774055,+!p1@LHX2!1.20!14.69!LHX2;;chr2:166428861..166428883,+!p3@CSRNP3!1.18!13.99!CSRNP3;;chr5:92920256..92920282,+!p7@NR2F1!1.17!16.90!NR2F1;;chr6:126112039..126112062,+!p8@NCOA7!1.17!16.52!NCOA7;;chr11:125034605..125034636,+!p2@PKNOX2!1.17!13.74!PKNOX2;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.17!13.68!POU3F3;;chr2:145275982..145276003,-!p7@ZEB2!1.15!13.17!ZEB2;;chr2:42721205..42721307,+!p4@MTA3!1.15!13.11!MTA3;;chr10:31610110..31610159,+!p2@ZEB1!1.14!12.85!ZEB1;;chr3:21792682..21792720,-!p1@ZNF385D!1.13!12.54!ZNF385D;;chr3:24536332..24536358,-!p2@THRB!1.13!12.47!THRB;;chr8:145560371..145560449,-!p1@SCRT1!1.13!12.35!SCRT1;;chr12:26277956..26277980,-!p1@BHLHE41!1.12!43.68!BHLHE41;;chr1:151032922..151032951,+!p2@MLLT11!1.12!20.32!MLLT11;;chr12:54785074..54785122,-!p2@ZNF385A!1.12!18.93!ZNF385A;;chr2:2335109..2335134,-!p2@MYT1L!1.12!12.09!MYT1L;;chr8:22550982..22550999,-!p1@EGR3!1.11!33.81!EGR3;;chr19:13134772..13134822,+!p2@NFIX!1.11!17.41!NFIX;;chr4:57522598..57522664,-!p3@HOPX!1.11!12.03!HOPX;;chr9:77112225..77112238,+!p2@RORB!1.11!11.97!RORB;;chr14:58797974..58798011,+!p3@ARID4A!1.11!11.97!ARID4A;;chr18:53070913..53070933,-!p16@TCF4!1.10!11.65!TCF4;;chr5:138609489..138609542,+!p8@MATR3!1.10!11.52!MATR3;;chr19:58545454..58545498,+!p1@ZSCAN1!1.09!11.40!ZSCAN1;;chrX:118739782..118739829,-!p2@NKRF!1.09!11.27!NKRF;;chr10:119302232..119302265,+!p1@EMX2!1.08!10.95!EMX2;;chr19:30863271..30863338,+!p1@ZNF536!1.08!10.89!ZNF536;;chr20:62680984..62680999,-!p1@SOX18!1.07!14.24!SOX18;;chr10:38265517..38265591,-!p1@ZNF25!1.06!40.58!ZNF25;;chr6:143266185..143266238,-!p2@HIVEP2!1.05!14.31!HIVEP2;;chr18:53068911..53068935,-!p4@TCF4!1.05!11.59!TCF4;;chr2:2335070..2335098,-!p4@MYT1L!1.05!10.32!MYT1L;;chr11:31832658..31832681,-!p1@PAX6!1.05!10.26!PAX6;;chr7:73038839..73038862,-!p1@MLXIPL!1.05!10.19!MLXIPL;;chr8:145560111..145560165,-!p2@SCRT1!1.05!10.19!SCRT1;;chr2:192015750..192015793,-!p2@STAT4!1.04!13.55!STAT4;;chr2:180726291..180726311,-!p1@ZNF385B!1.04!10.00!ZNF385B;;chr12:24102576..24102623,-!p2@SOX5!1.04!10.00!SOX5;;chr15:31658288..31658338,+!p4@KLF13!1.04!10.00!KLF13;;chr2:162272716..162272753,+!p3@TBR1!1.04!9.94!TBR1;;chr8:30890810..30890880,-!p1@PURG!1.04!9.88!PURG;;chr2:200323414..200323455,-!p1@SATB2!1.03!20.83!SATB2;;chr16:85932760..85932775,+!p1@IRF8!1.03!9.81!IRF8;;chr19:13135566..13135577,+!p9@NFIX!1.03!9.62!NFIX;;chr2:60780607..60780624,-!p2@BCL11A!1.02!29.69!BCL11A;;chrY:21906761..21906810,-!p2@KDM5D!1.02!9.50!KDM5D;;chr19:13135731..13135787,+!p10@NFIX!1.02!9.43!NFIX;;chr11:125034586..125034604,+!p3@PKNOX2!1.02!9.43!PKNOX2;;chr10:64133910..64133925,+!p5@ZNF365!1.01!9.31!ZNF365;;chr1:8585945..8586056,-!p3@RERE!1.00!30.52!RERE;;chr3:126076242..126076257,-!p1@KLF15!1.00!11.33!KLF15;;chr8:93107451..93107468,-!p2@RUNX1T1!1.00!8.99!RUNX1T1;;chr9:126773880..126773895,+!p2@LHX2!1.00!8.93!LHX2;;chr2:73520667..73520683,-!p1@EGR4!1.00!8.93!EGR4;;chr5:88179230..88179270,-!p4@MEF2C!0.99!17.35!MEF2C;;chr19:37998036..37998098,+!p2@ZNF793!0.99!11.08!ZNF793;;chr11:8102819..8102845,+!p3@TUB!0.99!10.89!TUB;;chr19:46800289..46800327,+!p2@HIF3A!0.99!8.86!HIF3A;;chr2:2330039..2330072,-!p6@MYT1L!0.99!8.67!MYT1L;;chr14:33408072..33408114,+!p2@NPAS3!0.98!10.26!NPAS3;;chr21:34442584..34442587,+!p3@OLIG1!0.98!8.55!OLIG1;;chr4:57522513..57522548,-!p4@HOPX!0.98!8.48!HOPX;;chr17:38256822..38256851,-!p1@NR1D1!0.97!67.30!NR1D1;;chr1:151032739..151032748,+!p6@MLLT11!0.97!10.51!MLLT11;;chr5:92919375..92919438,+!p6@NR2F1!0.97!8.99!NR2F1;;chr2:145277640..145277771,-!p1@ZEB2!0.96!112.06!ZEB2;;chr7:150974206..150974255,-!p1@SMARCD3!0.96!52.42!SMARCD3;;chr1:61548069..61548102,+!p3@NFIA!0.96!20.01!NFIA;;chr8:22550530..22550609,-!p2@EGR3!0.96!8.10!EGR3;;chr8:93074803..93074845,-!p1@RUNX1T1!0.96!8.10!RUNX1T1;;chr10:64134045..64134083,+!p3@ZNF365!0.96!8.04!ZNF365;;chr7:28725740..28725778,+!p1@CREB5!0.95!73.38!CREB5;;chr16:79634624..79634642,-!p1@MAF!0.95!31.78!MAF;;chr8:28347737..28347785,-!p1@FBXO16,p2@ZNF395!0.95!17.54!ZNF395;;chr12:24715376..24715432,-!p1@SOX5!0.95!10.19!SOX5;;chr16:51185172..51185197,-!p1@SALL1!0.95!7.91!SALL1;;chr2:180726331..180726344,-!p5@ZNF385B!0.95!7.85!ZNF385B;;chr17:38219209..38219230,+!p1@THRA!0.94!104.59!THRA;;chr19:53636125..53636178,-!p1@ZNF415!0.94!22.41!ZNF415;;chr21:39870339..39870443,-!p1@ERG!0.94!7.66!ERG;;chr6:126112074..126112144,+!p1@NCOA7!0.93!104.65!NCOA7;;chr17:70117153..70117174,+!p1@SOX9!0.93!80.91!SOX9;;chr1:151032782..151032801,+!p4@MLLT11!0.93!15.45!MLLT11;;chr14:33403648..33403710,+!p3@NPAS3!0.93!7.60!NPAS3;;chr16:51185318..51185348,-!p2@SALL1!0.93!7.53!SALL1;;chr2:2328725..2328739,-!p5@MYT1L!0.93!7.53!MYT1L;;chr3:21792790..21792824,-!p4@ZNF385D!0.93!7.53!ZNF385D;;chr2:172949484..172949522,+!p1@DLX1!0.93!7.47!DLX1;;chr2:2328299..2328363,-!p3@MYT1L!0.93!7.47!MYT1L;;chr3:18466787..18466839,-!p1@SATB1!0.92!33.81!SATB1;;chr9:124991204..124991246,-!p1@LHX6!0.92!7.28!LHX6;;chr5:138629628..138629688,+!p2@MATR3!0.91!176.64!MATR3;;chrX:101975643..101975683,+!p1@BHLHB9!0.91!16.21!BHLHB9;;chr19:4065848..4065909,-!p4@ZBTB7A!0.91!14.18!ZBTB7A;;chr8:60031682..60031710,-!p2@TOX!0.91!11.97!TOX;;chr19:57183114..57183145,-!p1@ZNF835!0.91!8.04!ZNF835;;chr11:47400078..47400106,-!p1@SPI1!0.91!7.22!SPI1;;chr4:26344778..26344807,+!p8@RBPJ!0.91!7.15!RBPJ;;chr19:3359158..3359209,+!p5@NFIC!0.90!7.03!NFIC;;chr13:100634031..100634045,+!p1@ZIC2!0.90!7.03!ZIC2;;chr19:7580549..7580596,+!p3@ZNF358!0.90!6.96!ZNF358;;chrX:102000987..102001029,+!p3@BHLHB9!0.90!6.96!BHLHB9;;chr11:31832862..31832884,-!p2@PAX6!0.90!6.90!PAX6;;chr5:178368186..178368238,+!p1@ZNF454!0.89!12.35!ZNF454;;chr9:126774058..126774081,+!p3@LHX2!0.89!6.84!LHX2;;chr4:26344754..26344772,+!p10@RBPJ!0.89!6.77!RBPJ;;chr19:49140609..49140643,-!p1@DBP!0.88!39.25!DBP;;chr2:74229812..74229867,+!p1@TET3!0.88!17.41!TET3;;chr1:151032833..151032850,+!p3@MLLT11!0.88!15.32!MLLT11;;chr12:26277929..262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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000955;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000956;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001016;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001870;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001890;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001893;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003528
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006601,UBERON:0010316
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 67: Line 41:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
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|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/frontal%2520lobe%252c%2520adult%252c%2520pool1.CNhs10647.10040-101F4.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/frontal%2520lobe%252c%2520adult%252c%2520pool1.CNhs10647.10040-101F4.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/frontal%2520lobe%252c%2520adult%252c%2520pool1.CNhs10647.10040-101F4.hg38.nobarcode.bam
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|id=FF:10040-101F4
|is_a=EFO:0002091;;FF:0010040
|is_obsolete=
|library_id=CNhs10647
|library_id_phase_based=2:CNhs10647
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10040
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10040
|name=frontal lobe, adult, pool1
|namespace=FANTOM5
|part_of=
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|profile_rnaseq=
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|rna_box=101
|rna_catalog_number=Cat:636563
|rna_concentration=1
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_lot_number=8121115A
|rna_od260/230=
|rna_od260/280=
|rna_position=F4
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=101F4
|rna_weight_ug=50
|sample_age=
|sample_category=tissues
|sample_cell_catalog=NA
|sample_cell_line=
|sample_cell_lot=NA
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=Clontech
|sample_description=
|sample_dev_stage=32-61 years old adult
|sample_disease=normal
|sample_donor(cell lot)=4 pool
|sample_ethnicity=C
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.06144317951982e-296!GO:0005737;cytoplasm;3.32055402463562e-149!GO:0044444;cytoplasmic part;3.05340705132751e-96!GO:0043226;organelle;4.61751400204791e-89!GO:0043229;intracellular organelle;1.55349448265684e-88!GO:0043227;membrane-bound organelle;4.2345960121045e-83!GO:0043231;intracellular membrane-bound organelle;5.98765839935233e-83!GO:0044422;organelle part;2.16082717844127e-60!GO:0005515;protein binding;1.45411400654555e-59!GO:0044446;intracellular organelle part;1.63656247925045e-59!GO:0032991;macromolecular complex;1.16471555277583e-55!GO:0016043;cellular component organization and biogenesis;5.62354723010674e-44!GO:0033036;macromolecule localization;3.5144759929864e-41!GO:0015031;protein transport;1.3586881082283e-40!GO:0003723;RNA binding;1.06976207716972e-37!GO:0005739;mitochondrion;1.06976207716972e-37!GO:0008104;protein localization;1.28400310984855e-37!GO:0031090;organelle membrane;5.67609365136055e-37!GO:0045184;establishment of protein localization;8.66588031084775e-37!GO:0030529;ribonucleoprotein complex;8.66588031084775e-37!GO:0043234;protein complex;3.22165299210935e-31!GO:0046907;intracellular transport;1.62955824928275e-30!GO:0051649;establishment of cellular localization;5.11404379027927e-29!GO:0051641;cellular localization;6.69991781083492e-29!GO:0044429;mitochondrial part;2.00402232510488e-28!GO:0043233;organelle lumen;2.63125652228659e-28!GO:0031974;membrane-enclosed lumen;2.63125652228659e-28!GO:0016192;vesicle-mediated transport;4.54305801317194e-27!GO:0044428;nuclear part;9.59744317828216e-27!GO:0031975;envelope;5.74567077383955e-24!GO:0031967;organelle envelope;7.72124676131609e-24!GO:0019538;protein metabolic process;2.49120877149519e-23!GO:0016071;mRNA metabolic process;4.12640819604309e-23!GO:0006886;intracellular protein transport;1.09037713115635e-22!GO:0006396;RNA processing;1.7763542863075e-22!GO:0044238;primary metabolic process;6.53256748161319e-22!GO:0008380;RNA splicing;2.2446758357511e-21!GO:0005829;cytosol;5.00823844492059e-21!GO:0005794;Golgi apparatus;1.19280421551535e-20!GO:0006119;oxidative phosphorylation;1.46388386607135e-20!GO:0044237;cellular metabolic process;3.29368380176173e-20!GO:0044260;cellular macromolecule metabolic process;3.88692394304072e-20!GO:0043170;macromolecule metabolic process;3.91065570042806e-20!GO:0005840;ribosome;9.7332833782991e-20!GO:0044267;cellular protein metabolic process;1.12104065182651e-19!GO:0006397;mRNA processing;1.28310451413913e-19!GO:0005740;mitochondrial envelope;1.65832871956841e-19!GO:0031982;vesicle;2.98757568930325e-19!GO:0031966;mitochondrial membrane;3.62111410322243e-19!GO:0031410;cytoplasmic vesicle;1.69448762277923e-18!GO:0031988;membrane-bound vesicle;3.67675556265332e-18!GO:0006996;organelle organization and biogenesis;7.9096209125413e-18!GO:0005634;nucleus;1.42121106841372e-17!GO:0016023;cytoplasmic membrane-bound vesicle;1.77030762917677e-17!GO:0000166;nucleotide binding;4.52403098851836e-17!GO:0006512;ubiquitin cycle;9.22444721664162e-17!GO:0019866;organelle inner membrane;9.49394076653507e-17!GO:0005743;mitochondrial inner membrane;2.03228582581297e-16!GO:0065003;macromolecular complex assembly;6.23377856199789e-16!GO:0031981;nuclear lumen;6.53147317464907e-16!GO:0003735;structural constituent of ribosome;8.87766688103224e-16!GO:0006412;translation;2.4690379562169e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;4.00759846403658e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;4.76107558304688e-15!GO:0016462;pyrophosphatase activity;5.50269941299196e-15!GO:0044455;mitochondrial membrane part;1.52679641946892e-14!GO:0045045;secretory pathway;1.74922167412185e-14!GO:0012505;endomembrane system;2.40530784299726e-14!GO:0005681;spliceosome;3.10724136702108e-14!GO:0017111;nucleoside-triphosphatase activity;3.21240546288978e-14!GO:0043412;biopolymer modification;3.5635271146596e-14!GO:0022607;cellular component assembly;4.19304355265113e-14!GO:0005746;mitochondrial respiratory chain;5.85060014875741e-14!GO:0016874;ligase activity;1.23628175955421e-13!GO:0043687;post-translational protein modification;1.9317863913519e-13!GO:0006464;protein modification process;2.20979230642605e-13!GO:0009058;biosynthetic process;2.70975694919182e-13!GO:0032553;ribonucleotide binding;2.70975694919182e-13!GO:0032555;purine ribonucleotide binding;2.70975694919182e-13!GO:0050136;NADH dehydrogenase (quinone) activity;7.97146232172611e-13!GO:0003954;NADH dehydrogenase activity;7.97146232172611e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;7.97146232172611e-13!GO:0007264;small GTPase mediated signal transduction;8.02263293599357e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.22030559236561e-12!GO:0006810;transport;1.26080437977829e-12!GO:0048770;pigment granule;1.26080437977829e-12!GO:0042470;melanosome;1.26080437977829e-12!GO:0033279;ribosomal subunit;1.60768866614878e-12!GO:0017076;purine nucleotide binding;2.50903594526295e-12!GO:0043283;biopolymer metabolic process;3.19026859269262e-12!GO:0022613;ribonucleoprotein complex biogenesis and assembly;5.82499089043057e-12!GO:0006457;protein folding;6.41124640353973e-12!GO:0048193;Golgi vesicle transport;6.81854942582993e-12!GO:0030135;coated vesicle;8.00534342314774e-12!GO:0042775;organelle ATP synthesis coupled electron transport;3.2742724579179e-11!GO:0042773;ATP synthesis coupled electron transport;3.2742724579179e-11!GO:0009059;macromolecule biosynthetic process;3.58230363681354e-11!GO:0030964;NADH dehydrogenase complex (quinone);4.06165419336634e-11!GO:0045271;respiratory chain complex I;4.06165419336634e-11!GO:0005747;mitochondrial respiratory chain complex I;4.06165419336634e-11!GO:0031980;mitochondrial lumen;4.06782918299743e-11!GO:0005759;mitochondrial matrix;4.06782918299743e-11!GO:0022618;protein-RNA complex assembly;8.29096651738302e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;8.45420963475053e-11!GO:0044249;cellular biosynthetic process;1.02428305302842e-10!GO:0051603;proteolysis involved in cellular protein catabolic process;1.30633549976751e-10!GO:0019829;cation-transporting ATPase activity;1.41871462800199e-10!GO:0008092;cytoskeletal protein binding;1.43750409422994e-10!GO:0043005;neuron projection;1.59927237661234e-10!GO:0006511;ubiquitin-dependent protein catabolic process;1.59927237661234e-10!GO:0044431;Golgi apparatus part;1.95336954565899e-10!GO:0019941;modification-dependent protein catabolic process;2.2224899319043e-10!GO:0043632;modification-dependent macromolecule catabolic process;2.2224899319043e-10!GO:0030695;GTPase regulator activity;2.27638578506149e-10!GO:0008135;translation factor activity, nucleic acid binding;2.33713454538757e-10!GO:0044257;cellular protein catabolic process;2.78982491877628e-10!GO:0005654;nucleoplasm;2.9477241951196e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.99098253670024e-10!GO:0003924;GTPase activity;3.69022205366888e-10!GO:0051234;establishment of localization;5.70842450933403e-10!GO:0005083;small GTPase regulator activity;6.13396946831347e-10!GO:0007399;nervous system development;8.12545730141279e-10!GO:0005768;endosome;1.05132639605305e-09!GO:0032940;secretion by cell;1.11297709552806e-09!GO:0051082;unfolded protein binding;1.35325392074122e-09!GO:0006605;protein targeting;1.55795882201474e-09!GO:0051179;localization;1.56481774404774e-09!GO:0044445;cytosolic part;2.24094197572517e-09!GO:0006793;phosphorus metabolic process;2.37676014045238e-09!GO:0006796;phosphate metabolic process;2.37676014045238e-09!GO:0008639;small protein conjugating enzyme activity;3.06360079310941e-09!GO:0005525;GTP binding;3.10468343325313e-09!GO:0044451;nucleoplasm part;3.83851321703756e-09!GO:0008565;protein transporter activity;4.78147317666069e-09!GO:0019787;small conjugating protein ligase activity;5.08852260237309e-09!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;5.13346357680985e-09!GO:0004842;ubiquitin-protein ligase activity;5.13510604703294e-09!GO:0044265;cellular macromolecule catabolic process;5.35387954076142e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;7.13909563121109e-09!GO:0043228;non-membrane-bound organelle;8.02455567433574e-09!GO:0043232;intracellular non-membrane-bound organelle;8.02455567433574e-09!GO:0000502;proteasome complex (sensu Eukaryota);9.88261563650049e-09!GO:0005783;endoplasmic reticulum;9.88261563650049e-09!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.07334915691155e-08!GO:0015986;ATP synthesis coupled proton transport;1.32086128500124e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.32086128500124e-08!GO:0030136;clathrin-coated vesicle;2.32158477541821e-08!GO:0030163;protein catabolic process;3.97320236146518e-08!GO:0007010;cytoskeleton organization and biogenesis;4.15430306386997e-08!GO:0016044;membrane organization and biogenesis;4.6256672403062e-08!GO:0000139;Golgi membrane;5.54133340746928e-08!GO:0010467;gene expression;6.75148480955477e-08!GO:0016881;acid-amino acid ligase activity;7.02933289642245e-08!GO:0008134;transcription factor binding;7.31329596744855e-08!GO:0043285;biopolymer catabolic process;9.51691080208064e-08!GO:0003743;translation initiation factor activity;9.95349411794075e-08!GO:0032561;guanyl ribonucleotide binding;1.0146391178137e-07!GO:0019001;guanyl nucleotide binding;1.0146391178137e-07!GO:0032559;adenyl ribonucleotide binding;1.05255799633799e-07!GO:0051186;cofactor metabolic process;1.20471393193887e-07!GO:0019717;synaptosome;1.66630536000534e-07!GO:0015935;small ribosomal subunit;1.8583866707949e-07!GO:0015631;tubulin binding;2.01104937178507e-07!GO:0006461;protein complex assembly;2.11213218160337e-07!GO:0006413;translational initiation;2.24039755463019e-07!GO:0044248;cellular catabolic process;2.41525934079696e-07!GO:0009060;aerobic respiration;2.53099866104387e-07!GO:0046034;ATP metabolic process;2.53099866104387e-07!GO:0006446;regulation of translational initiation;2.54324966667307e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.57896397869004e-07!GO:0005524;ATP binding;3.01212752158347e-07!GO:0045333;cellular respiration;3.63896336391859e-07!GO:0016604;nuclear body;3.81745934586138e-07!GO:0016607;nuclear speck;4.53591853515298e-07!GO:0048471;perinuclear region of cytoplasm;5.11640959447294e-07!GO:0009141;nucleoside triphosphate metabolic process;6.24505171376681e-07!GO:0044440;endosomal part;6.48634045511921e-07!GO:0010008;endosome membrane;6.48634045511921e-07!GO:0006754;ATP biosynthetic process;6.81204692802027e-07!GO:0006753;nucleoside phosphate metabolic process;6.81204692802027e-07!GO:0030554;adenyl nucleotide binding;6.92426584850054e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;7.25171121106237e-07!GO:0009144;purine nucleoside triphosphate metabolic process;7.25171121106237e-07!GO:0006163;purine nucleotide metabolic process;7.54958502229576e-07!GO:0030036;actin cytoskeleton organization and biogenesis;7.94086059422861e-07!GO:0048475;coated membrane;7.97644196731749e-07!GO:0030117;membrane coat;7.97644196731749e-07!GO:0015630;microtubule cytoskeleton;8.42938654144973e-07!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;8.52246787204643e-07!GO:0009199;ribonucleoside triphosphate metabolic process;9.21044114775422e-07!GO:0016469;proton-transporting two-sector ATPase complex;9.29543320298052e-07!GO:0009057;macromolecule catabolic process;9.74687306183723e-07!GO:0009150;purine ribonucleotide metabolic process;1.00019062557767e-06!GO:0019226;transmission of nerve impulse;1.09709383429472e-06!GO:0000398;nuclear mRNA splicing, via spliceosome;1.13621504045023e-06!GO:0000375;RNA splicing, via transesterification reactions;1.13621504045023e-06!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.13621504045023e-06!GO:0016310;phosphorylation;1.16257923896349e-06!GO:0006164;purine nucleotide biosynthetic process;1.38503271584599e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.41814038256901e-06!GO:0009152;purine ribonucleotide biosynthetic process;1.79452751416328e-06!GO:0005761;mitochondrial ribosome;2.07355427890263e-06!GO:0000313;organellar ribosome;2.07355427890263e-06!GO:0009259;ribonucleotide metabolic process;2.15426937814257e-06!GO:0030425;dendrite;2.26773937104571e-06!GO:0008287;protein serine/threonine phosphatase complex;2.29824339769176e-06!GO:0015078;hydrogen ion transmembrane transporter activity;2.32142616125038e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.72934831278773e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.72934831278773e-06!GO:0006913;nucleocytoplasmic transport;3.26043126123484e-06!GO:0007242;intracellular signaling cascade;3.33764617364721e-06!GO:0031965;nuclear membrane;3.51518125154861e-06!GO:0009142;nucleoside triphosphate biosynthetic process;3.56614836219883e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.56614836219883e-06!GO:0030029;actin filament-based process;4.6454518408225e-06!GO:0051169;nuclear transport;4.71707832206692e-06!GO:0019899;enzyme binding;5.14213160673839e-06!GO:0007265;Ras protein signal transduction;5.213771533481e-06!GO:0006099;tricarboxylic acid cycle;5.24888008374589e-06!GO:0046356;acetyl-CoA catabolic process;5.24888008374589e-06!GO:0042623;ATPase activity, coupled;6.3708342859244e-06!GO:0009260;ribonucleotide biosynthetic process;7.25241720141189e-06!GO:0006732;coenzyme metabolic process;7.53786159800737e-06!GO:0015934;large ribosomal subunit;7.85380487629262e-06!GO:0016887;ATPase activity;1.06882102139938e-05!GO:0005905;coated pit;1.18714702814057e-05!GO:0005798;Golgi-associated vesicle;1.20504741058887e-05!GO:0048489;synaptic vesicle transport;1.24137928673513e-05!GO:0003779;actin binding;1.24279950096458e-05!GO:0051056;regulation of small GTPase mediated signal transduction;1.29827065951833e-05!GO:0032446;protein modification by small protein conjugation;1.33635658425732e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.41688280379807e-05!GO:0005635;nuclear envelope;1.44362340409417e-05!GO:0008021;synaptic vesicle;1.45795967532361e-05!GO:0005770;late endosome;1.49282391744848e-05!GO:0009109;coenzyme catabolic process;1.80965477495989e-05!GO:0045259;proton-transporting ATP synthase complex;1.98850842906896e-05!GO:0005874;microtubule;2.00267602263198e-05!GO:0005769;early endosome;2.01349172133337e-05!GO:0006084;acetyl-CoA metabolic process;2.2587020122481e-05!GO:0016567;protein ubiquitination;2.46011541782777e-05!GO:0005730;nucleolus;2.46573347650548e-05!GO:0009055;electron carrier activity;2.73102112993763e-05!GO:0030120;vesicle coat;3.00368841997447e-05!GO:0030662;coated vesicle membrane;3.00368841997447e-05!GO:0044432;endoplasmic reticulum part;3.36714869478579e-05!GO:0031252;leading edge;3.69339454300411e-05!GO:0007269;neurotransmitter secretion;4.02140341074657e-05!GO:0008047;enzyme activator activity;4.24156062718971e-05!GO:0022890;inorganic cation transmembrane transporter activity;5.13125173187035e-05!GO:0007268;synaptic transmission;5.57216930440521e-05!GO:0006897;endocytosis;6.39360601647918e-05!GO:0010324;membrane invagination;6.39360601647918e-05!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);7.30117136141308e-05!GO:0008017;microtubule binding;7.40011763866639e-05!GO:0051128;regulation of cellular component organization and biogenesis;7.54659509512257e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;8.40122752113805e-05!GO:0015399;primary active transmembrane transporter activity;8.40122752113805e-05!GO:0008654;phospholipid biosynthetic process;8.78949906686703e-05!GO:0005096;GTPase activator activity;9.24847730619273e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;9.78238684188202e-05!GO:0006613;cotranslational protein targeting to membrane;9.9472526354672e-05!GO:0051187;cofactor catabolic process;0.000105953016896317!GO:0006888;ER to Golgi vesicle-mediated transport;0.000121243018884825!GO:0006403;RNA localization;0.000156823515705196!GO:0042175;nuclear envelope-endoplasmic reticulum network;0.000168819166382999!GO:0045055;regulated secretory pathway;0.000175685475430341!GO:0006650;glycerophospholipid metabolic process;0.000176274251790323!GO:0003712;transcription cofactor activity;0.000181619999550376!GO:0017038;protein import;0.00019080736270835!GO:0043492;ATPase activity, coupled to movement of substances;0.000192981979647936!GO:0030133;transport vesicle;0.000194689482358469!GO:0005789;endoplasmic reticulum membrane;0.000200372736706657!GO:0050657;nucleic acid transport;0.000200372736706657!GO:0051236;establishment of RNA localization;0.000200372736706657!GO:0050658;RNA transport;0.000200372736706657!GO:0000151;ubiquitin ligase complex;0.000213681625469151!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);0.00022283377202272!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000265779751874838!GO:0046467;membrane lipid biosynthetic process;0.0002800851740059!GO:0005085;guanyl-nucleotide exchange factor activity;0.000317106302469721!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000329306761241287!GO:0009056;catabolic process;0.000351059980016839!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000353929483648135!GO:0016301;kinase activity;0.000370183234112922!GO:0016568;chromatin modification;0.000409083685456963!GO:0000245;spliceosome assembly;0.00041942059631955!GO:0005643;nuclear pore;0.000457801962835647!GO:0046578;regulation of Ras protein signal transduction;0.000488729192091237!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000509014164977019!GO:0030384;phosphoinositide metabolic process;0.000510734863863129!GO:0016311;dephosphorylation;0.000528039750118358!GO:0030118;clathrin coat;0.000534393432149787!GO:0031072;heat shock protein binding;0.000596007141080839!GO:0006325;establishment and/or maintenance of chromatin architecture;0.000604017819429717!GO:0030027;lamellipodium;0.000604017819429717!GO:0044453;nuclear membrane part;0.000604652712869291!GO:0003729;mRNA binding;0.000633881443705048!GO:0007019;microtubule depolymerization;0.000657046969926105!GO:0004721;phosphoprotein phosphatase activity;0.000671219948385581!GO:0001505;regulation of neurotransmitter levels;0.000688196182574287!GO:0019208;phosphatase regulator activity;0.00070405101581403!GO:0008601;protein phosphatase type 2A regulator activity;0.000762388678674763!GO:0005793;ER-Golgi intermediate compartment;0.000843571581855165!GO:0006643;membrane lipid metabolic process;0.00088246364522995!GO:0000159;protein phosphatase type 2A complex;0.000897144654809503!GO:0000902;cell morphogenesis;0.00089819666618109!GO:0032989;cellular structure morphogenesis;0.00089819666618109!GO:0051188;cofactor biosynthetic process;0.000915764356708136!GO:0005741;mitochondrial outer membrane;0.000921052250502738!GO:0051246;regulation of protein metabolic process;0.000921052250502738!GO:0016197;endosome transport;0.000922847554992487!GO:0008026;ATP-dependent helicase activity;0.000926903092613491!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000986532891000538!GO:0019902;phosphatase binding;0.00102351044259803!GO:0015980;energy derivation by oxidation of organic compounds;0.00103426054055024!GO:0022406;membrane docking;0.00104511809237812!GO:0048278;vesicle docking;0.00104511809237812!GO:0006752;group transfer coenzyme metabolic process;0.00111948149944153!GO:0043566;structure-specific DNA binding;0.00112341337720188!GO:0005773;vacuole;0.00114691594156418!GO:0006904;vesicle docking during exocytosis;0.0011613776002621!GO:0006470;protein amino acid dephosphorylation;0.00116247736546931!GO:0004386;helicase activity;0.00117757411841672!GO:0016791;phosphoric monoester hydrolase activity;0.00124469957257614!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.001317317592112!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.00132711036705665!GO:0004674;protein serine/threonine kinase activity;0.00136236570832208!GO:0031111;negative regulation of microtubule polymerization or depolymerization;0.00138025688726268!GO:0030427;site of polarized growth;0.00142296122351709!GO:0050767;regulation of neurogenesis;0.001439418404879!GO:0005516;calmodulin binding;0.00169663932000797!GO:0048167;regulation of synaptic plasticity;0.001724178512503!GO:0030426;growth cone;0.00172837417685715!GO:0003724;RNA helicase activity;0.00174001885096151!GO:0016564;transcription repressor activity;0.00178174608420164!GO:0006323;DNA packaging;0.00185752047640279!GO:0030054;cell junction;0.00185752047640279!GO:0006612;protein targeting to membrane;0.00188949213435529!GO:0019867;outer membrane;0.00191704838581033!GO:0031968;organelle outer membrane;0.00193581231150664!GO:0003697;single-stranded DNA binding;0.00196238618954153!GO:0016740;transferase activity;0.0019889860230046!GO:0016050;vesicle organization and biogenesis;0.0019889860230046!GO:0051129;negative regulation of cellular component organization and biogenesis;0.00199781791037292!GO:0007266;Rho protein signal transduction;0.00199944873514785!GO:0046488;phosphatidylinositol metabolic process;0.00204488642558982!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.0021560183176945!GO:0006891;intra-Golgi vesicle-mediated transport;0.00215860108212878!GO:0031114;regulation of microtubule depolymerization;0.00217433910152238!GO:0007026;negative regulation of microtubule depolymerization;0.00217433910152238!GO:0030424;axon;0.0021852726938425!GO:0019888;protein phosphatase regulator activity;0.00220717399169142!GO:0048523;negative regulation of cellular process;0.00233407173701488!GO:0004722;protein serine/threonine phosphatase activity;0.00243139035587772!GO:0051028;mRNA transport;0.00248333410584878!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00264442050837288!GO:0043623;cellular protein complex assembly;0.00264442050837288!GO:0006892;post-Golgi vesicle-mediated transport;0.00273432199697609!GO:0045786;negative regulation of progression through cell cycle;0.002770801478885!GO:0044456;synapse part;0.00277624680803216!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00278238201299593!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00278238201299593!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00278238201299593!GO:0031901;early endosome membrane;0.00288049911546849!GO:0048487;beta-tubulin binding;0.00289880250328539!GO:0005869;dynactin complex;0.00299648571994532!GO:0051087;chaperone binding;0.00301282264368591!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00307062576304628!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00307062576304628!GO:0004812;aminoacyl-tRNA ligase activity;0.00307062576304628!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00307062576304628!GO:0005938;cell cortex;0.00312700171735561!GO:0050803;regulation of synapse structure and activity;0.00313848588535299!GO:0031902;late endosome membrane;0.00323095508468187!GO:0005875;microtubule associated complex;0.00350134579388524!GO:0012506;vesicle membrane;0.00370026389717!GO:0009108;coenzyme biosynthetic process;0.00375483756804225!GO:0008154;actin polymerization and/or depolymerization;0.00382767757826102!GO:0043038;amino acid activation;0.00429650897270598!GO:0006418;tRNA aminoacylation for protein translation;0.00429650897270598!GO:0043039;tRNA aminoacylation;0.00429650897270598!GO:0006606;protein import into nucleus;0.00473926595664623!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.00502358374540494!GO:0050839;cell adhesion molecule binding;0.00517254985847216!GO:0048500;signal recognition particle;0.00524093931578116!GO:0009966;regulation of signal transduction;0.00524093931578116!GO:0032011;ARF protein signal transduction;0.00524093931578116!GO:0032012;regulation of ARF protein signal transduction;0.00524093931578116!GO:0051170;nuclear import;0.00525177321349542!GO:0006259;DNA metabolic process;0.00528110066679862!GO:0051427;hormone receptor binding;0.00536504492821067!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.00546840037790264!GO:0043209;myelin sheath;0.00546840037790264!GO:0004667;prostaglandin-D synthase activity;0.00546840037790264!GO:0050802;circadian sleep/wake cycle, sleep;0.00546840037790264!GO:0022410;circadian sleep/wake cycle process;0.00546840037790264!GO:0042749;regulation of circadian sleep/wake cycle;0.00546840037790264!GO:0030660;Golgi-associated vesicle membrane;0.00558574414159522!GO:0051168;nuclear export;0.0056095832665911!GO:0043021;ribonucleoprotein binding;0.00573966638186526!GO:0005001;transmembrane receptor protein tyrosine phosphatase activity;0.00585597213359728!GO:0019198;transmembrane receptor protein phosphatase activity;0.00585597213359728!GO:0046474;glycerophospholipid biosynthetic process;0.00608245550148489!GO:0006644;phospholipid metabolic process;0.00608625388136887!GO:0016126;sterol biosynthetic process;0.00613011277857598!GO:0006607;NLS-bearing substrate import into nucleus;0.00623537107844778!GO:0005813;centrosome;0.00629802352221115!GO:0003714;transcription corepressor activity;0.0063179121058737!GO:0065002;intracellular protein transport across a membrane;0.00637358680323024!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00638582354052945!GO:0048699;generation of neurons;0.00668824935180821!GO:0051261;protein depolymerization;0.00683342095838295!GO:0030320;cellular monovalent inorganic anion homeostasis;0.0069696824162173!GO:0055083;monovalent inorganic anion homeostasis;0.0069696824162173!GO:0055064;chloride ion homeostasis;0.0069696824162173!GO:0030644;cellular chloride ion homeostasis;0.0069696824162173!GO:0043087;regulation of GTPase activity;0.00717475156370684!GO:0005774;vacuolar membrane;0.0076397308103524!GO:0007272;ensheathment of neurons;0.00772204358501071!GO:0008366;axon ensheathment;0.00772204358501071!GO:0050811;GABA receptor binding;0.00787087602511516!GO:0005839;proteasome core complex (sensu Eukaryota);0.00789632327115168!GO:0030532;small nuclear ribonucleoprotein complex;0.00794411678823569!GO:0044433;cytoplasmic vesicle part;0.00797963806251096!GO:0030258;lipid modification;0.00806105846819823!GO:0030658;transport vesicle membrane;0.00807880297075721!GO:0005048;signal sequence binding;0.00811487128742801!GO:0016070;RNA metabolic process;0.0081340502821616!GO:0007017;microtubule-based process;0.00840967605543706!GO:0051920;peroxiredoxin activity;0.00861497176039934!GO:0005099;Ras GTPase activator activity;0.0088496915015519!GO:0035257;nuclear hormone receptor binding;0.00908229683527515!GO:0000323;lytic vacuole;0.00918289549592049!GO:0005764;lysosome;0.00918289549592049!GO:0019903;protein phosphatase binding;0.00940399193492584!GO:0031109;microtubule polymerization or depolymerization;0.0106000873862326!GO:0042578;phosphoric ester hydrolase activity;0.0106604575191076!GO:0006414;translational elongation;0.0107011433229365!GO:0022008;neurogenesis;0.0107079853817322!GO:0001508;regulation of action potential;0.0107269867632206!GO:0009117;nucleotide metabolic process;0.0108322529648573!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0108966718006896!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0109251918637189!GO:0045047;protein targeting to ER;0.0109251918637189!GO:0042254;ribosome biogenesis and assembly;0.0110492172779496!GO:0048519;negative regulation of biological process;0.0112153165353176!GO:0044448;cell cortex part;0.0112153165353176!GO:0003746;translation elongation factor activity;0.0116828660081036!GO:0030137;COPI-coated vesicle;0.012306295811884!GO:0051540;metal cluster binding;0.0124085940755536!GO:0051536;iron-sulfur cluster binding;0.0124085940755536!GO:0030742;GTP-dependent protein binding;0.0124789826499265!GO:0008186;RNA-dependent ATPase activity;0.0127348448427029!GO:0008180;signalosome;0.0129252173341466!GO:0003713;transcription coactivator activity;0.0131913448282325!GO:0005815;microtubule organizing center;0.0134264393611528!GO:0019904;protein domain specific binding;0.0135857674541847!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0142352316441715!GO:0030867;rough endoplasmic reticulum membrane;0.014508298485406!GO:0001578;microtubule bundle formation;0.014988964714025!GO:0030182;neuron differentiation;0.0150548313031816!GO:0006887;exocytosis;0.0150841398436037!GO:0016363;nuclear matrix;0.0152502680579023!GO:0000314;organellar small ribosomal subunit;0.0152638015997124!GO:0005763;mitochondrial small ribosomal subunit;0.0152638015997124!GO:0005791;rough endoplasmic reticulum;0.0153242065555255!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.0154509429178313!GO:0045296;cadherin binding;0.0154509429178313!GO:0016079;synaptic vesicle exocytosis;0.0155676076458661!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0162569033037339!GO:0006818;hydrogen transport;0.017308488651921!GO:0046489;phosphoinositide biosynthetic process;0.0175989512708793!GO:0005086;ARF guanyl-nucleotide exchange factor activity;0.01779096052487!GO:0006665;sphingolipid metabolic process;0.017802127360949!GO:0007034;vacuolar transport;0.017802127360949!GO:0030041;actin filament polymerization;0.0178929479839281!GO:0030132;clathrin coat of coated pit;0.0181005980939635!GO:0019887;protein kinase regulator activity;0.018149444612467!GO:0035035;histone acetyltransferase binding;0.0185756662110882!GO:0019783;small conjugating protein-specific protease activity;0.0185919838663222!GO:0005092;GDP-dissociation inhibitor activity;0.0186806887853713!GO:0004298;threonine endopeptidase activity;0.0189916644175909!GO:0006695;cholesterol biosynthetic process;0.0189916644175909!GO:0008312;7S RNA binding;0.0189916644175909!GO:0000209;protein polyubiquitination;0.0191457693577299!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0191457693577299!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0191457693577299!GO:0015629;actin cytoskeleton;0.0194898408161931!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0195719359501508!GO:0008610;lipid biosynthetic process;0.020099202852733!GO:0006661;phosphatidylinositol biosynthetic process;0.0203778562796335!GO:0000287;magnesium ion binding;0.020962275060507!GO:0046930;pore complex;0.0211960829785045!GO:0030659;cytoplasmic vesicle membrane;0.0216349471571596!GO:0008250;oligosaccharyl transferase complex;0.0216349471571596!GO:0004683;calmodulin-dependent protein kinase activity;0.0222388638607622!GO:0008088;axon cargo transport;0.0225013931968437!GO:0005868;cytoplasmic dynein complex;0.022805061885287!GO:0035258;steroid hormone receptor binding;0.0228893199480199!GO:0005885;Arp2/3 protein complex;0.0230377230218415!GO:0006402;mRNA catabolic process;0.0230377230218415!GO:0005765;lysosomal membrane;0.0233192740526406!GO:0000904;cellular morphogenesis during differentiation;0.0233865631689186!GO:0004843;ubiquitin-specific protease activity;0.0234087942133325!GO:0030030;cell projection organization and biogenesis;0.0234446734934659!GO:0048858;cell projection morphogenesis;0.0234446734934659!GO:0032990;cell part morphogenesis;0.0234446734934659!GO:0015992;proton transport;0.0237208903856142!GO:0030125;clathrin vesicle coat;0.0248126881026022!GO:0030665;clathrin coated vesicle membrane;0.0248126881026022!GO:0044437;vacuolar part;0.0251867287430026!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0251932647793343!GO:0043025;cell soma;0.025275976335232!GO:0060052;neurofilament cytoskeleton organization and biogenesis;0.025567686747915!GO:0019894;kinesin binding;0.025762960870276!GO:0031371;ubiquitin conjugating enzyme complex;0.0261564563106089!GO:0008139;nuclear localization sequence binding;0.0268164125339083!GO:0033673;negative regulation of kinase activity;0.0269176860136611!GO:0006469;negative regulation of protein kinase activity;0.0269176860136611!GO:0000062;acyl-CoA binding;0.0269945214945457!GO:0045211;postsynaptic membrane;0.0272266340599466!GO:0005100;Rho GTPase activator activity;0.0274298577568302!GO:0004221;ubiquitin thiolesterase activity;0.0275938788052953!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0278123189366878!GO:0031124;mRNA 3'-end processing;0.0278365948197766!GO:0007611;learning and/or memory;0.0280245518603916!GO:0004004;ATP-dependent RNA helicase activity;0.0291290940089551!GO:0000059;protein import into nucleus, docking;0.0315253062489484!GO:0043681;protein import into mitochondrion;0.0315775431535535!GO:0048667;neuron morphogenesis during differentiation;0.0322071819021902!GO:0048812;neurite morphogenesis;0.0322071819021902!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0325534993195251!GO:0033043;regulation of organelle organization and biogenesis;0.0325534993195251!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0327121609217056!GO:0048666;neuron development;0.0327121609217056!GO:0048168;regulation of neuronal synaptic plasticity;0.0329387076628216!GO:0042026;protein refolding;0.0330345653897031!GO:0006376;mRNA splice site selection;0.0334227356414284!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0334227356414284!GO:0009165;nucleotide biosynthetic process;0.0336860813664158!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0344536759707382!GO:0001726;ruffle;0.0349713762786234!GO:0031110;regulation of microtubule polymerization or depolymerization;0.0350262118357194!GO:0033130;acetylcholine receptor binding;0.0353342793649094!GO:0031175;neurite development;0.0356517202119706!GO:0019911;structural constituent of myelin sheath;0.0357699281746987!GO:0005088;Ras guanyl-nucleotide exchange factor activity;0.0362353034514547!GO:0051276;chromosome organization and biogenesis;0.0367986655605158!GO:0003711;transcription elongation regulator activity;0.0369646362423918!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.0369646362423918!GO:0016859;cis-trans isomerase activity;0.0388867455535718!GO:0051539;4 iron, 4 sulfur cluster binding;0.0394309293281333!GO:0006595;polyamine metabolic process;0.0394538477001166!GO:0019207;kinase regulator activity;0.0403727176843234!GO:0051287;NAD binding;0.0408383088456118!GO:0016579;protein deubiquitination;0.0408383088456118!GO:0030663;COPI coated vesicle membrane;0.0408383088456118!GO:0030126;COPI vesicle coat;0.0408383088456118!GO:0046839;phospholipid dephosphorylation;0.0408383088456118!GO:0030119;AP-type membrane coat adaptor complex;0.0408625108769813!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0410361986794884!GO:0008022;protein C-terminus binding;0.0411374542367915!GO:0004576;oligosaccharyl transferase activity;0.0417924615056329!GO:0006333;chromatin assembly or disassembly;0.0424565601125905!GO:0005762;mitochondrial large ribosomal subunit;0.0425260049447727!GO:0000315;organellar large ribosomal subunit;0.0425260049447727!GO:0007158;neuron adhesion;0.0427734842659712!GO:0051252;regulation of RNA metabolic process;0.0428740192777738!GO:0003725;double-stranded RNA binding;0.0431782760610012!GO:0042670;retinal cone cell differentiation;0.0431782760610012!GO:0051281;positive regulation of release of sequestered calcium ion into cytosol;0.0431782760610012!GO:0046549;retinal cone cell development;0.0431782760610012!GO:0005952;cAMP-dependent protein kinase complex;0.0431782760610012!GO:0007041;lysosomal transport;0.0434817320320567!GO:0051020;GTPase binding;0.0436411918902311!GO:0042995;cell projection;0.0438349943516906!GO:0035023;regulation of Rho protein signal transduction;0.0441942456896556!GO:0051348;negative regulation of transferase activity;0.0442152403181243!GO:0006672;ceramide metabolic process;0.044762230295749!GO:0006399;tRNA metabolic process;0.0447799282024869!GO:0030911;TPR domain binding;0.0459535123610247!GO:0009066;aspartate family amino acid metabolic process;0.046109566735161!GO:0004672;protein kinase activity;0.0464614894434327!GO:0009892;negative regulation of metabolic process;0.0469833419685783!GO:0030131;clathrin adaptor complex;0.0474488638135691!GO:0048488;synaptic vesicle endocytosis;0.0479425175317862!GO:0042552;myelination;0.0482788866905946!GO:0006611;protein export from nucleus;0.0484589906234591!GO:0006366;transcription from RNA polymerase II promoter;0.0485550420150871!GO:0006378;mRNA polyadenylation;0.0491581518238563!GO:0043407;negative regulation of MAP kinase activity;0.0494162432466758
|sample_id=10040
|sample_note=
|sample_sex=mixed
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=frontal lobe
|top_motifs=NHLH1,2:4.36644742416;REST:4.3334838519;EGR1..3:4.05452705296;PRRX1,2:4.03047404809;AHR_ARNT_ARNT2:3.97434103742;MYFfamily:3.79623220476;ZFP161:3.74953730268;ATF2:3.5953442607;MTE{core}:3.47046669052;MED-1{core}:3.46217452004;ZBTB6:3.28627739565;CUX2:3.2703854288;PAX5:3.24461796749;TFAP2B:3.12020606022;RREB1:3.10911539055;RFX1:3.10673315327;MTF1:3.06848865945;GTF2I:2.8949070556;PRDM1:2.86168550943;DBP:2.83329871185;HOXA9_MEIS1:2.81819842167;HIC1:2.78589852958;MZF1:2.69196057781;SOX2:2.6870402346;SMAD1..7,9:2.57830114451;POU5F1:2.56415675469;OCT4_SOX2{dimer}:2.55407577611;BREu{core}:2.54111893288;NKX3-2:2.48750368276;TGIF1:2.4424238565;FOXM1:2.40658887505;SOX5:2.40496055458;JUN:2.37183092951;LMO2:2.33897330349;NANOG:2.32169226921;POU6F1:2.29366543084;NKX2-3_NKX2-5:2.24381381062;GFI1B:2.24003843705;RFX2..5_RFXANK_RFXAP:2.21798473802;PATZ1:2.18607326108;MAZ:2.1565669529;SOX{8,9,10}:2.10185914257;SOX17:2.08468240054;MAFB:2.05389288913;PAX6:2.02130886926;TFDP1:2.00479403135;NRF1:1.9803220911;CDC5L:1.9226632782;LEF1_TCF7_TCF7L1,2:1.8519322718;GCM1,2:1.82222963345;NFIX:1.80882641992;HMGA1,2:1.76793381233;POU3F1..4:1.69314022603;GATA4:1.62188973256;ARID5B:1.60669669463;KLF4:1.53677183685;HBP1_HMGB_SSRP1_UBTF:1.53095667243;HOX{A4,D4}:1.49906818048;FOXQ1:1.49363056474;NFIL3:1.43982375976;ESRRA:1.3801257512;FOX{F1,F2,J1}:1.34801783891;EBF1:1.34172914525;ZNF238:1.33722278569;MYOD1:1.32714060005;RORA:1.32704763169;RBPJ:1.32559945285;XBP1:1.29295167949;STAT1,3:1.20099228169;EP300:1.19664411819;ADNP_IRX_SIX_ZHX:1.14659445785;GTF2A1,2:1.13257810509;ALX1:1.10526844263;SP1:1.06520536994;SREBF1,2:1.05321241695;ZNF143:0.993249993025;ZNF384:0.990333971698;MEF2{A,B,C,D}:0.97065824204;ZNF423:0.911062805261;CREB1:0.889073714529;CRX:0.870062756422;BPTF:0.830507970396;YY1:0.82640216312;FOXP1:0.812332313587;HAND1,2:0.764106046578;ZEB1:0.760328574761;TLX2:0.753457064763;SPZ1:0.730456342579;FOXN1:0.726833742565;GFI1:0.708937335611;FOXP3:0.662947121565;TFAP2{A,C}:0.637810863842;NKX6-1,2:0.621551987949;T:0.595969222993;TBX4,5:0.592156313793;TLX1..3_NFIC{dimer}:0.580264604919;MYBL2:0.563458681695;PAX4:0.544757381719;ATF4:0.509610048254;TEF:0.491339340339;ATF5_CREB3:0.480763942281;FOX{D1,D2}:0.478440158514;NR3C1:0.471948838427;GZF1:0.41815075244;HMX1:0.383794983898;FOXA2:0.344022361733;POU1F1:0.34087678842;XCPE1{core}:0.288664239914;ONECUT1,2:0.25378044901;ZIC1..3:0.209434440737;NANOG{mouse}:0.161565846431;PBX1:0.130706869801;VSX1,2:0.129003668653;AR:0.117437876365;FOX{I1,J2}:0.0987748399429;IRF7:0.0958556257525;bHLH_family:0.0708969777238;IKZF2:0.0537803680308;PDX1:0.0201453790078;NFY{A,B,C}:0.0196793982634;PAX2:-0.00582401929854;PAX1,9:-0.0831193862219;IKZF1:-0.0841174151664;FOXD3:-0.0844575622644;NFE2L2:-0.108384483949;NFATC1..3:-0.120786807483;HOX{A6,A7,B6,B7}:-0.196265303897;PAX3,7:-0.222318324637;SNAI1..3:-0.25387378925;DMAP1_NCOR{1,2}_SMARC:-0.303690368875;FOXO1,3,4:-0.334529362205;GATA6:-0.339211768081;FOXL1:-0.33958806633;TAL1_TCF{3,4,12}:-0.377143447772;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.382762942695;TFAP4:-0.385820987779;ZNF148:-0.39133214086;IRF1,2:-0.410833564275;LHX3,4:-0.430566192667;TOPORS:-0.449595286768;NFE2L1:-0.472369790054;SPI1:-0.478377939773;PAX8:-0.490571066115;NR5A1,2:-0.491702737627;NFE2:-0.497520414934;UFEwm:-0.4998825763;HSF1,2:-0.594154251802;SPIB:-0.693196077045;NR1H4:-0.706177585555;CEBPA,B_DDIT3:-0.727244234384;ATF6:-0.749282035981;STAT2,4,6:-0.756627899684;ETS1,2:-0.785050764533;HNF1A:-0.820861924115;ELK1,4_GABP{A,B1}:-0.85683801138;FOSL2:-0.868170834738;TFCP2:-0.873595749619;ZBTB16:-0.893920693787;TP53:-0.903396860347;ESR1:-0.956936473137;BACH2:-0.98088883525;FOS_FOS{B,L1}_JUN{B,D}:-1.03045554647;GLI1..3:-1.04815116677;TEAD1:-1.05384641573;PPARG:-1.14332568313;HNF4A_NR2F1,2:-1.16532093389;NKX3-1:-1.18700953705;E2F1..5:-1.20670294052;HIF1A:-1.21321164898;RUNX1..3:-1.22190324933;NFKB1_REL_RELA:-1.28304261586;NKX2-2,8:-1.28576002978;SRF:-1.29998067621;HLF:-1.31076685081;TBP:-1.38557065667;MYB:-1.39720470679;RXR{A,B,G}:-1.40006108713;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.40336570584;ELF1,2,4:-1.43017763776;NKX2-1,4:-1.48102484123;EVI1:-1.56517849776;ALX4:-1.61669742808;RXRA_VDR{dimer}:-1.70967794693;CDX1,2,4:-1.72671605279;AIRE:-1.74388711563;STAT5{A,B}:-1.75239024104;POU2F1..3:-1.77773955899;PITX1..3:-1.8013910043;EN1,2:-1.8067620792;HES1:-2.14946481019;HOX{A5,B5}:-2.24702718931;NR6A1:-3.24728793109
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10040-101F4;search_select_hide=table117:FF:10040-101F4
}}
}}

Latest revision as of 12:16, 3 June 2020

Name:frontal lobe, adult, pool1
Species:Human (Homo sapiens)
Library ID:CNhs10647
Sample type:tissues
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuefrontal lobe
dev stage32-61 years old adult
sexmixed
ageNA
cell typeCELL MIXTURE - tissue sample
cell lineNA
companyClontech
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number8121115A
catalog numberCat:636563
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005272
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs10647 CAGE DRX008656 DRR009528
Accession ID Hg19

Library idBAMCTSS
CNhs10647 DRZ000953 DRZ002338
Accession ID Hg38

Library idBAMCTSS
CNhs10647 DRZ012303 DRZ013688
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0.39
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.118
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.304
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0.0518
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0.15
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0.578
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.0267
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0.119
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.0267
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0.119
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0.178
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0.0755
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.0466
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.207
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.248
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.0267
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40.0267
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.14
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0.14
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.171
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0.0267
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.934
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0.0267
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.0767
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0.507
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.0267
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0.0518
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0.692
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.0171
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0.213
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-0.0854
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0.379
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0.0267
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0.438
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0.29
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.506
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.428
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.664
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.0267
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0.14
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.119
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.0267
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.0392
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0.755
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0.098
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0.159
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0.401
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.0518
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0.276
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0.0267
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10647

Jaspar motifP-value
MA0002.20.0101
MA0003.10.347
MA0004.10.435
MA0006.10.336
MA0007.10.164
MA0009.10.147
MA0014.10.655
MA0017.10.0029
MA0018.20.0696
MA0019.10.942
MA0024.10.956
MA0025.10.269
MA0027.10.533
MA0028.10.152
MA0029.10.0608
MA0030.10.245
MA0031.10.981
MA0035.20.0752
MA0038.10.0617
MA0039.20.209
MA0040.10.585
MA0041.10.544
MA0042.10.705
MA0043.10.38
MA0046.10.0365
MA0047.20.0833
MA0048.10.12
MA0050.10.01
MA0051.10.139
MA0052.10.127
MA0055.10.00352
MA0057.10.91
MA0058.10.377
MA0059.10.0781
MA0060.10.312
MA0061.10.00927
MA0062.20.0374
MA0065.22.96488e-4
MA0066.10.0216
MA0067.10.699
MA0068.10.582
MA0069.10.369
MA0070.10.254
MA0071.10.023
MA0072.10.383
MA0073.10.325
MA0074.10.171
MA0076.10.371
MA0077.10.216
MA0078.10.744
MA0079.20.487
MA0080.21.767e-8
MA0081.10.0665
MA0083.10.0709
MA0084.10.713
MA0087.10.417
MA0088.10.165
MA0090.10.269
MA0091.10.434
MA0092.10.363
MA0093.10.459
MA0099.22.83501e-12
MA0100.10.717
MA0101.10.00484
MA0102.20.174
MA0103.10.198
MA0104.20.448
MA0105.17.91022e-4
MA0106.10.0304
MA0107.10.00796
MA0108.20.954
MA0111.10.46
MA0112.28.39059e-4
MA0113.10.238
MA0114.10.00286
MA0115.10.304
MA0116.10.00433
MA0117.10.976
MA0119.10.052
MA0122.10.785
MA0124.10.696
MA0125.10.217
MA0131.10.992
MA0135.10.0261
MA0136.12.71832e-10
MA0137.20.47
MA0138.20.227
MA0139.10.421
MA0140.10.00926
MA0141.10.00706
MA0142.10.994
MA0143.10.973
MA0144.10.26
MA0145.10.208
MA0146.10.00879
MA0147.10.32
MA0148.10.109
MA0149.10.018
MA0150.10.00128
MA0152.10.91
MA0153.10.242
MA0154.10.0388
MA0155.10.571
MA0156.11.94605e-5
MA0157.10.676
MA0159.10.0047
MA0160.10.025
MA0162.10.115
MA0163.17.82072e-6
MA0164.10.696
MA0258.10.00891
MA0259.10.803



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10647

Novel motifP-value
10.0377
100.0335
1000.3
1010.674
1020.781
1030.219
1040.136
1050.299
1060.0439
1070.115
1080.806
1090.00725
110.0148
1100.0462
1110.0624
1120.292
1130.604
1140.0936
1150.89
1160.148
1170.0107
1180.116
1190.0942
120.684
1200.162
1210.587
1220.673
1230.679
1240.0379
1250.215
1260.0316
1270.465
1280.14
1290.547
130.00151
1300.475
1310.0647
1320.767
1330.00497
1340.303
1350.193
1360.00943
1370.785
1380.866
1390.0742
140.846
1400.0792
1410.273
1420.764
1430.0194
1440.891
1450.0842
1460.586
1470.936
1480.154
1490.284
150.0739
1500.173
1510.622
1520.114
1530.775
1540.571
1550.462
1560.428
1570.433
1580.605
1590.0412
160.0722
1600.185
1610.198
1620.985
1630.776
1640.0205
1650.0403
1660.847
1670.422
1680.672
1690.00743
170.147
180.19
190.182
20.947
200.104
210.07
220.219
230.388
240.1
250.48
261.14024e-4
270.916
280.691
290.0139
30.0314
300.686
310.885
320.0205
330.0735
340.706
350.498
360.115
370.0383
380.302
390.218
40.866
400.0483
410.385
420.206
430.102
440.0754
450.759
460.0592
470.0614
480.0546
490.135
50.501
500.342
510.508
520.579
530.929
540.452
550.39
560.459
570.239
580.31
590.116
60.592
600.0705
610.0726
620.164
630.15
640.201
650.241
660.295
670.331
680.361
690.269
70.0618
700.0238
710.0113
720.484
730.04
740.767
750.033
760.438
770.186
780.00297
790.143
80.0491
800.912
810.559
820.461
830.162
840.638
850.184
860.209
870.00343
880.848
890.514
90.479
900.0523
910.458
920.438
930.714
940.0765
950.025
960.941
970.768
980.193
990.673



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs10647


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000955 (brain)
0001870 (frontal cortex)
0000956 (cerebral cortex)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0000073 (regional part of nervous system)
0000477 (anatomical cluster)
0003528 (brain grey matter)
0002791 (regional part of telencephalon)
0000467 (anatomical system)
0002619 (regional part of cerebral cortex)
0001062 (anatomical entity)
0000480 (anatomical group)
0002616 (regional part of brain)
0002780 (regional part of forebrain)
0002020 (gray matter)
0010317 (germ layer / neural crest derived structure)
0001017 (central nervous system)
0001016 (nervous system)
0001869 (cerebral hemisphere)
0001893 (telencephalon)
0001890 (forebrain)
0000203 (pallium)
0001950 (neocortex)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010040 (human frontal lobe - adult sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0010316 (germ layer / neural crest)

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