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FFCP PHASE1:Mm9::chr4:124539507..124539544,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr4:124539507..124539544,-
|DHSsupport=NA
|short_description=p2@Maneal
|DPIdataset=NA
|description=CAGE_peak_2_at_Maneal_5end
|association_with_transcript=-92bp_to_ENSMUST00000064444,NM_001007573,uc008urg.1_5end
|EntrezGene=215090
|EntrezGene=215090
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q6P1J0
|UniProt=Q6P1J0
|association_with_transcript=-92bp_to_ENSMUST00000064444,NM_001007573,uc008urg.1_5end
|cluster_id=chr4:124539507..124539544,-
|description=CAGE_peak_2_at_Maneal_5end
|id=chr4:124539507..124539544,-
|ontology_enrichment_celltype=CL:0000540!8.45e-16!33;CL:0000047!8.45e-16!33;CL:0000031!8.45e-16!33;CL:0000404!8.45e-16!33;CL:0000117!2.10e-14!23;CL:0000337!2.10e-14!23;CL:0000221!1.31e-13!44;CL:0000133!1.31e-13!44;CL:0002319!2.35e-13!43;CL:0000393!3.32e-11!39;CL:0000211!3.32e-11!39;CL:0000055!2.47e-09!50
|ontology_enrichment_celltype_v019_2=CL:0000117,3.58e-20,23;CL:0000337,3.58e-20,23;CL:0000540,3.79e-18,33;CL:0000047,3.79e-18,33;CL:0000031,3.79e-18,33;CL:0000404,3.79e-18,33;CL:0000221,1.46e-14,44;CL:0000133,1.46e-14,44;CL:0002319,3.32e-14,43;CL:0000393,9.44e-14,39;CL:0000211,9.44e-14,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!3.67e-35!102;UBERON:0000924!3.67e-35!102;UBERON:0006601!3.67e-35!102;UBERON:0001017!7.66e-33!73;UBERON:0005743!7.66e-33!73;UBERON:0002346!9.56e-33!71;UBERON:0003075!9.56e-33!71;UBERON:0007284!9.56e-33!71;UBERON:0000073!1.24e-32!75;UBERON:0001016!1.24e-32!75;UBERON:0000033!6.35e-28!63;UBERON:0001049!3.35e-26!52;UBERON:0005068!3.35e-26!52;UBERON:0006241!3.35e-26!52;UBERON:0007135!3.35e-26!52;UBERON:0000955!1.07e-24!50;UBERON:0006238!1.07e-24!50;UBERON:0002616!5.98e-24!49;UBERON:0003056!2.77e-23!49;UBERON:0003080!4.28e-20!40;UBERON:0002780!2.14e-19!39;UBERON:0001890!2.14e-19!39;UBERON:0006240!2.14e-19!39;UBERON:0002020!4.10e-19!34;UBERON:0007811!4.70e-17!86;UBERON:0000153!4.61e-16!94;UBERON:0002791!9.29e-16!29;UBERON:0003528!9.29e-16!29;UBERON:0001893!9.29e-16!29;UBERON:0000956!4.12e-11!21;UBERON:0001869!4.12e-11!21;UBERON:0000203!4.12e-11!21;UBERON:0002619!5.89e-09!17;UBERON:0002021!1.85e-07!10;UBERON:0000411!1.85e-07!10;UBERON:0001950!1.85e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.23e-41,73;UBERON:0001016,2.42e-40,75;UBERON:0002346,1.32e-39,64;UBERON:0003075,1.32e-39,64;UBERON:0007284,1.32e-39,64;UBERON:0000073,5.23e-39,54;UBERON:0001049,4.92e-37,52;UBERON:0005068,4.92e-37,52;UBERON:0006241,4.92e-37,52;UBERON:0007135,4.92e-37,52;UBERON:0004121,6.46e-37,95;UBERON:0000924,6.46e-37,95;UBERON:0006601,6.46e-37,95;UBERON:0010371,8.98e-35,73;UBERON:0000955,9.44e-32,47;UBERON:0006238,9.44e-32,47;UBERON:0002616,1.09e-30,46;UBERON:0003056,6.06e-30,49;UBERON:0010314,2.86e-29,92;UBERON:0003080,1.19e-27,40;UBERON:0002780,1.22e-26,39;UBERON:0001890,1.22e-26,39;UBERON:0006240,1.22e-26,39;UBERON:0002020,1.28e-26,34;UBERON:0003528,9.30e-22,29;UBERON:0002791,9.30e-22,29;UBERON:0001893,9.30e-22,29;UBERON:0000956,4.93e-15,21;UBERON:0001869,4.93e-15,21;UBERON:0000203,4.93e-15,21;UBERON:0002619,6.35e-12,17;UBERON:0002021,4.10e-10,10;UBERON:0000411,4.10e-10,10;UBERON:0001950,4.10e-10,10;UBERON:0003076,2.00e-09,12;UBERON:0003057,2.00e-09,12;UBERON:0002420,6.57e-08,8;UBERON:0007245,6.57e-08,8;UBERON:0010009,6.57e-08,8;UBERON:0010011,6.57e-08,8;UBERON:0000454,6.57e-08,8;UBERON:0000025,1.07e-07,114;UBERON:0004111,3.19e-07,122;UBERON:0002240,3.93e-07,6;UBERON:0005174,3.93e-07,6;UBERON:0001137,3.93e-07,6
|phase1_expression=3.52327463630547,0,0,0,0,0,0.233612640595526,0.258246646883153,0.140788722151667,0.468129052643987,0,0,0,0.262261207256992,0,0,0,0,0.137114433605739,0,2.63634199468316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,1.30815093828268,0,0.388859798148567,0.839918529752175,0,0,0,0.672187598284928,0,0,0,10.7227724255587,10.0508286061686,12.0427966666174,1.0165335962074,0,0,0,0,1.79760066311043,0.384218305321555,6.84351441235953,8.37036817656482,7.78202357000113,19.4242669394586,15.0190607847097,7.22695715368229,8.24271050756833,15.6267193723704,17.6185409599022,14.5563565417114,10.9060638611933,9.49581271657396,10.2466160834699,7.29278718779464,16.7509799400829,6.19038871034848,11.3070703354839,13.8475435172624,11.6744778255264,11.3703661953433,0.151452386666368,1.058001841495,0,0,0,0.539703191637817,0,0,1.54488862144927,0,0,0,1.40843419776681,0,0,0,0.216491041011214,0,0,0.34255163915718,0.258937883647172,1.92974780784272,1.56136794089522,0.913396434936424,1.38369298353635,1.65794904607885,1.64624189989987,1.25666591329675,0,0.144599356919912,0,0,0.220841518460394,0,0,14.0534782565543,9.21565509979202,0.255457055208591,0,0,0.127070227073065,14.0803201040533,18.7575247155637,12.6910895633993,18.9468509009581,12.7857728665165,15.3763152974074,11.0324058886075,0.305518091550949,0,0,1.89397670297827,0.910843100738926,0.919608417733892,1.44049703844279,2.10986744970001,3.26575195926374,3.07472928683639,4.2165776051878,5.43277078551933,0.215567992932842,0.378212160335639,0.527853372491847,0,0,0.348252166522167,0.411564272815887,0.398068533636986,0,0,0,0,0.469052119962192,0,0,0.196764231747404,0.308534225774757,0,0,0.116765342367169,0,0,0.162137619091711,0,0,0,15.3511662451813,11.7311258112384,0.330418782983798,0,0,0.232236671860439,0.515469845288373,0,0,0.190225626112559,0,0,0,0.397912944082302,0,0.898819408654221,0,0,0,0.342745537829186,0,0,0,0.140271639780637,0,0,0,0,0,0,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.37898282354097,0.325929952884052,0.169745085775188,0,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0,0,0.144649058581512,0,0,0,0,14.4495530989013,11.9555920324047,0,0,0.94652465824877,1.17131623288992,2.15423397732799,1.19484398976276,1.33679204449436,0.849229592366497,0.404810701674894,1.46127928955656,0.790575555893047,14.7807805554031,0.283880170416537,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,0,0.727067458955011,0,0.316036757935816,0,0,4.08527526904546,0.18006109403131,2.45781499187234,1.28602221018955,2.83744373827638,3.21063871683727,4.44282355625727,2.74018454203139,0,0,0.441056796109924,0.32977250588296,0.484393280087717,0.301564624640779,0.477489376012546,0,0,20.3967832211561,0,0.412773735926445,0.185194527369712,0.188368457004691,0,0,0,0.279902904647316,0.276399947608848,0,1.26534397432454,1.01659733563424,0.108005340821801,0.209088296014469,0,0,0.165306911450672,0,0.129614973291793,0,0,0,0.330916980914195,0.194451188344048,1.03327858782185,0.675824501963113,0,0,0.209718688851422,0,0,0.632022241256357,0.202725215290164,0.205421914329655,0,0,0,0,0.147689527174577,0.201932899896295,0.228620419965,0.100826185136841,0,0.192423683280659,0.116876902181569,0.680191150845634,0,0,0.167884616364078,0.386379188064381,0,0.36630324853453,0,0.501572104035363,12.4245405375755,11.5081309126794,13.1765968091061,11.6860163993708,13.0165678756422,7.55393897389701,13.5004500046361,16.6618845192962,19.4851235863208,10.3552062350364,0.518936737920883,2.39414924040619,1.36586884603307,0.729320151204882,0.838452650511929,1.65459157605013,2.00022055021454,0.206035057238894,1.60459604795908,0.758091635291392,1.2673964994512,1.69763707247469,1.68554713445788,1.53660365771686,1.43588672389033,1.90517476513229,1.39061191133827,1.35036454324594,0.824171801606613,1.47198920134397,1.02860775715625,1.4198064492747,1.90748951957857,2.0348498328526,2.35273451038327,1.60767754994185,1.82927972872773,0.789209134313529,1.62964936615034,0.561142271657738,1.54225523561426,0.886540341380071,2.04615521584845,0.619747364743864,1.15743966588685,3.74715866906919,1.87145286756327,0.859484216193193,0.382576664137687,0.882365676478062,0.695603506861264
|phase1_expression=3.52327463630547,0,0,0,0,0,0.233612640595526,0.258246646883153,0.140788722151667,0.468129052643987,0,0,0,0.262261207256992,0,0,0,0,0.137114433605739,0,2.63634199468316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,1.30815093828268,0,0.388859798148567,0.839918529752175,0,0,0,0.672187598284928,0,0,0,10.7227724255587,10.0508286061686,12.0427966666174,1.0165335962074,0,0,0,0,1.79760066311043,0.384218305321555,6.84351441235953,8.37036817656482,7.78202357000113,19.4242669394586,15.0190607847097,7.22695715368229,8.24271050756833,15.6267193723704,17.6185409599022,14.5563565417114,10.9060638611933,9.49581271657396,10.2466160834699,7.29278718779464,16.7509799400829,6.19038871034848,11.3070703354839,13.8475435172624,11.6744778255264,11.3703661953433,0.151452386666368,1.058001841495,0,0,0,0.539703191637817,0,0,1.54488862144927,0,0,0,1.40843419776681,0,0,0,0.216491041011214,0,0,0.34255163915718,0.258937883647172,1.92974780784272,1.56136794089522,0.913396434936424,1.38369298353635,1.65794904607885,1.64624189989987,1.25666591329675,0,0.144599356919912,0,0,0.220841518460394,0,0,14.0534782565543,9.21565509979202,0.255457055208591,0,0,0.127070227073065,14.0803201040533,18.7575247155637,12.6910895633993,18.9468509009581,12.7857728665165,15.3763152974074,11.0324058886075,0.305518091550949,0,0,1.89397670297827,0.910843100738926,0.919608417733892,1.44049703844279,2.10986744970001,3.26575195926374,3.07472928683639,4.2165776051878,5.43277078551933,0.215567992932842,0.378212160335639,0.527853372491847,0,0,0.348252166522167,0.411564272815887,0.398068533636986,0,0,0,0,0.469052119962192,0,0,0.196764231747404,0.308534225774757,0,0,0.116765342367169,0,0,0.162137619091711,0,0,0,15.3511662451813,11.7311258112384,0.330418782983798,0,0,0.232236671860439,0.515469845288373,0,0,0.190225626112559,0,0,0,0.397912944082302,0,0.898819408654221,0,0,0,0.342745537829186,0,0,0,0.140271639780637,0,0,0,0,0,0,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.37898282354097,0.325929952884052,0.169745085775188,0,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0,0,0.144649058581512,0,0,0,0,14.4495530989013,11.9555920324047,0,0,0.94652465824877,1.17131623288992,2.15423397732799,1.19484398976276,1.33679204449436,0.849229592366497,0.404810701674894,1.46127928955656,0.790575555893047,14.7807805554031,0.283880170416537,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,0,0.727067458955011,0,0.316036757935816,0,0,4.08527526904546,0.18006109403131,2.45781499187234,1.28602221018955,2.83744373827638,3.21063871683727,4.44282355625727,2.74018454203139,0,0,0.441056796109924,0.32977250588296,0.484393280087717,0.301564624640779,0.477489376012546,0,0,20.3967832211561,0,0.412773735926445,0.185194527369712,0.188368457004691,0,0,0,0.279902904647316,0.276399947608848,0,1.26534397432454,1.01659733563424,0.108005340821801,0.209088296014469,0,0,0.165306911450672,0,0.129614973291793,0,0,0,0.330916980914195,0.194451188344048,1.03327858782185,0.675824501963113,0,0,0.209718688851422,0,0,0.632022241256357,0.202725215290164,0.205421914329655,0,0,0,0,0.147689527174577,0.201932899896295,0.228620419965,0.100826185136841,0,0.192423683280659,0.116876902181569,0.680191150845634,0,0,0.167884616364078,0.386379188064381,0,0.36630324853453,0,0.501572104035363,12.4245405375755,11.5081309126794,13.1765968091061,11.6860163993708,13.0165678756422,7.55393897389701,13.5004500046361,16.6618845192962,19.4851235863208,10.3552062350364,0.518936737920883,2.39414924040619,1.36586884603307,0.729320151204882,0.838452650511929,1.65459157605013,2.00022055021454,0.206035057238894,1.60459604795908,0.758091635291392,1.2673964994512,1.69763707247469,1.68554713445788,1.53660365771686,1.43588672389033,1.90517476513229,1.39061191133827,1.35036454324594,0.824171801606613,1.47198920134397,1.02860775715625,1.4198064492747,1.90748951957857,2.0348498328526,2.35273451038327,1.60767754994185,1.82927972872773,0.789209134313529,1.62964936615034,0.561142271657738,1.54225523561426,0.886540341380071,2.04615521584845,0.619747364743864,1.15743966588685,3.74715866906919,1.87145286756327,0.859484216193193,0.382576664137687,0.882365676478062,0.695603506861264
|short_description=p2@Maneal
}}
}}

Latest revision as of 07:58, 26 September 2015

Short description:p2@Maneal
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Maneal_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -92bp_to_ENSMUST00000064444, NM_001007573, uc008urg.1_5end
EntrezGene:Maneal
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Maneal

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.52
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.64
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C310.72
Mouse Granule cells, donor2.CNhs12357.11731-123E310.05
Mouse Granule cells, donor3.CNhs12108.11636-122C712.04
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.84
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.37
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.78
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F119.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D515.02
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.23
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.24
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D615.63
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D317.62
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F314.56
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.91
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.50
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.25
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.29
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E416.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D613.85
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.67
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.93
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C11.65
adrenal gland, neonate N25.CNhs11223.1377-27I31.26
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B214.05
cerebellum, neonate N30.CNhs11135.1395-42I29.22
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A414.08
corpus striatum, adult.CNhs10487.19-21D818.76
corpus striatum, neonate N00.CNhs11226.630-43F112.69
cortex, adult.CNhs10473.12-14D518.95
cortex, neonate N30.CNhs11107.1392-42F212.79
diencephalon, adult.CNhs10482.20-12F215.38
diencephalon, neonate N30.CNhs11201.1388-42B211.03
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C63.27
eyeball, neonate N01.CNhs11140.1532-43E73.07
eyeball, neonate N02.CNhs11205.1551-44G84.22
eyeball, neonate N16.CNhs11188.777-19A25.43
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E815.35
hippocampus, neonate N00.CNhs11228.627-43G111.73
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C214.45
medulla oblongata, neonate N30.CNhs11200.1396-42A311.96
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I914.78
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G84.09
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C72.46
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B92.84
pituitary gland, embryo E16.CNhs11036.449-43F63.21
pituitary gland, embryo E17.CNhs11039.1265-44F54.44
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C920.40
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.42
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.51
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.18
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.02
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A613.50
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A716.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A819.49
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.36
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.35
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.58e-2023
neuroblast (sensu Vertebrata)3.58e-2023
neuron3.79e-1833
neuronal stem cell3.79e-1833
neuroblast3.79e-1833
electrically signaling cell3.79e-1833
ectodermal cell1.46e-1444
neurectodermal cell1.46e-1444
neural cell3.32e-1443
electrically responsive cell9.44e-1439
electrically active cell9.44e-1439

Uber anatomy
Ontology termp-valuen
central nervous system7.23e-4173
nervous system2.42e-4075
neurectoderm1.32e-3964
neural plate1.32e-3964
presumptive neural plate1.32e-3964
regional part of nervous system5.23e-3954
neural tube4.92e-3752
neural rod4.92e-3752
future spinal cord4.92e-3752
neural keel4.92e-3752
ectoderm-derived structure6.46e-3795
ectoderm6.46e-3795
presumptive ectoderm6.46e-3795
ecto-epithelium8.98e-3573
brain9.44e-3247
future brain9.44e-3247
regional part of brain1.09e-3046
pre-chordal neural plate6.06e-3049
structure with developmental contribution from neural crest2.86e-2992
anterior neural tube1.19e-2740
regional part of forebrain1.22e-2639
forebrain1.22e-2639
future forebrain1.22e-2639
gray matter1.28e-2634
brain grey matter9.30e-2229
regional part of telencephalon9.30e-2229
telencephalon9.30e-2229
cerebral cortex4.93e-1521
cerebral hemisphere4.93e-1521
pallium4.93e-1521
regional part of cerebral cortex6.35e-1217
occipital lobe4.10e-1010
visual cortex4.10e-1010
neocortex4.10e-1010
posterior neural tube2.00e-0912
chordal neural plate2.00e-0912
basal ganglion6.57e-088
nuclear complex of neuraxis6.57e-088
aggregate regional part of brain6.57e-088
collection of basal ganglia6.57e-088
cerebral subcortex6.57e-088
tube1.07e-07114
anatomical conduit3.19e-07122
spinal cord3.93e-076
dorsal region element3.93e-076
dorsum3.93e-076
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