FFCP PHASE1:Mm9::chr4:129135594..129135595,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr4:129135594..129135595,+ to FFCP PHASE1:Mm9::chr4:129135594..129135595,+: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=896 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000082679_5end | |||
|cluster_id=chr4:129135594..129135595,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000082679_5end | |||
|id=chr4:129135594..129135595,+ | |||
|ontology_enrichment_celltype=CL:0000548!1.60e-31!115;CL:0000004!1.60e-31!115;CL:0000255!1.60e-31!115;CL:0002371!6.82e-30!118;CL:0000144!2.39e-28!121;CL:0000012!2.39e-28!121;CL:0000723!3.66e-27!91;CL:0000048!3.66e-27!91;CL:0000034!5.96e-27!97;CL:0000055!1.89e-24!50;CL:0002319!7.25e-24!43;CL:0000221!6.29e-23!44;CL:0000133!6.29e-23!44;CL:0002321!2.79e-22!70;CL:0000220!2.79e-22!70;CL:0000393!4.62e-19!39;CL:0000211!4.62e-19!39;CL:0000540!4.88e-19!33;CL:0000047!4.88e-19!33;CL:0000031!4.88e-19!33;CL:0000404!4.88e-19!33;CL:0000117!3.36e-15!23;CL:0000337!3.36e-15!23;CL:0000219!2.44e-14!54;CL:0002320!3.43e-11!46;CL:0000134!3.43e-11!46;CL:0002031!9.75e-10!25;CL:0000839!4.92e-08!13;CL:0000063!1.55e-07!66;CL:0000988!9.29e-07!32;CL:0002032!9.29e-07!32;CL:0000037!9.29e-07!32;CL:0000566!9.29e-07!32;CL:0000837!9.29e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,8.75e-34,43;CL:0000221,9.43e-33,44;CL:0000133,9.43e-33,44;CL:0002321,3.30e-32,70;CL:0000540,1.71e-27,33;CL:0000047,1.71e-27,33;CL:0000031,1.71e-27,33;CL:0000404,1.71e-27,33;CL:0000393,2.90e-27,39;CL:0000211,2.90e-27,39;CL:0000723,5.08e-27,91;CL:0000048,5.08e-27,91;CL:0000034,9.92e-26,97;CL:0000117,7.62e-23,23;CL:0000337,7.62e-23,23;CL:0002453,3.77e-09,8;CL:0000219,3.81e-09,54;CL:0000839,4.37e-09,13;CL:0000333,5.47e-07,10;CL:0000095,5.47e-07,10;CL:0000243,5.47e-07,10;CL:0000123,5.47e-07,10;CL:0000125,5.47e-07,10;CL:0000030,5.47e-07,10;CL:0000339,5.47e-07,10;CL:0000128,5.73e-07,6;CL:0000126,5.73e-07,6;CL:0000127,5.73e-07,6;CL:0000107,6.15e-07,9;CL:0000763,6.53e-07,16;CL:0002609,6.55e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.35e-20!73;UBERON:0005743!1.35e-20!73;UBERON:0000073!2.02e-20!75;UBERON:0001016!2.02e-20!75;UBERON:0002020!1.93e-16!34;UBERON:0002791!2.27e-13!29;UBERON:0003528!2.27e-13!29;UBERON:0001893!2.27e-13!29;UBERON:0004121!2.50e-12!102;UBERON:0000924!2.50e-12!102;UBERON:0006601!2.50e-12!102;UBERON:0000956!1.10e-11!21;UBERON:0001869!1.10e-11!21;UBERON:0000203!1.10e-11!21;UBERON:0002384!3.43e-11!46;UBERON:0002619!4.49e-11!17;UBERON:0001049!6.21e-11!52;UBERON:0005068!6.21e-11!52;UBERON:0006241!6.21e-11!52;UBERON:0007135!6.21e-11!52;UBERON:0002616!1.34e-09!49;UBERON:0000955!3.54e-09!50;UBERON:0006238!3.54e-09!50;UBERON:0002021!5.00e-09!10;UBERON:0000411!5.00e-09!10;UBERON:0001950!5.00e-09!10;UBERON:0002780!8.25e-09!39;UBERON:0001890!8.25e-09!39;UBERON:0006240!8.25e-09!39;UBERON:0003080!2.37e-08!40;UBERON:0002346!6.10e-08!71;UBERON:0003075!6.10e-08!71;UBERON:0007284!6.10e-08!71;UBERON:0000033!2.07e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.70e-30,73;UBERON:0001016,5.61e-29,75;UBERON:0002020,6.37e-25,34;UBERON:0003528,4.09e-20,29;UBERON:0002791,4.09e-20,29;UBERON:0001893,4.09e-20,29;UBERON:0004121,6.08e-20,95;UBERON:0000924,6.08e-20,95;UBERON:0006601,6.08e-20,95;UBERON:0000073,1.21e-18,54;UBERON:0000956,8.74e-17,21;UBERON:0001869,8.74e-17,21;UBERON:0000203,8.74e-17,21;UBERON:0001049,7.41e-16,52;UBERON:0005068,7.41e-16,52;UBERON:0006241,7.41e-16,52;UBERON:0007135,7.41e-16,52;UBERON:0002619,2.01e-15,17;UBERON:0002346,3.20e-13,64;UBERON:0003075,3.20e-13,64;UBERON:0007284,3.20e-13,64;UBERON:0002021,3.31e-13,10;UBERON:0000411,3.31e-13,10;UBERON:0001950,3.31e-13,10;UBERON:0002780,4.13e-13,39;UBERON:0001890,4.13e-13,39;UBERON:0006240,4.13e-13,39;UBERON:0003080,1.31e-12,40;UBERON:0002616,2.02e-12,46;UBERON:0000955,5.34e-12,47;UBERON:0006238,5.34e-12,47;UBERON:0010371,1.83e-10,73;UBERON:0003056,4.63e-09,49;UBERON:0010314,1.59e-08,92;UBERON:0011216,2.58e-07,194;UBERON:0002410,6.15e-07,9 | |||
|phase1_expression=0,0,0,0.90739263392049,0,0,0,0.387369970324729,0.422366166455,0.936258105287974,0.513653904676515,0.797721589953364,0.513602189793617,0.0874204024189974,1.99865857089398,0.607425802169478,2.09868563438444,0.315462165358238,0,1.69755860719212,0,0.0992909512008853,0.522399578277871,0,0,0,0,0,0,0,0,31.1165029995219,6.1506478758457,15.8481681015439,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,5.47673941043627,2.18025156380447,2.41654801007919,3.30530828426282,3.21968769738334,1.43752564364972,0.167782606057736,0,0.336093799142464,1.54355661621568,2.29226751951005,4.64104883049698,4.24864567805155,4.7609188134483,4.43681982454325,3.38844532069132,3.55717918444456,1.7997994345628,4.94433181283487,10.6572017241915,2.99600110518405,5.37905627450176,1.03689612308478,2.70011876663381,3.15487442027073,3.99911378165325,3.53389665522582,3.67472397644862,1.91690942036473,4.5960939330501,1.10115880999389,1.91531007127782,3.84016333140609,3.16527090552465,2.74462930807229,1.56274011167028,2.51264699101243,3.37657566019008,2.13917546887534,2.06240009831567,3.13217697758026,1.67759501242771,0,0.529000920747499,0.289864488701678,0.860423876981386,2.03991400112325,3.77792234146472,11.0461990966104,12.0967259516281,0,0,0,0,0,0,2.54805239706646,0,2.38140145112336,1.26679932737549,3.53867111510348,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0.130120442962704,0.229902104433473,0,0.150704817835715,0,0,0,0,0,0.567318240503458,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0.568326998791185,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0,0,0,0,16.5870412333199,5.4390568381871,0,0,0,0.117211686592203,0,0,0.631016438832513,2.73307121007647,2.58508077279359,2.86762557543062,2.89638276307112,1.41538265394416,3.23848561339915,1.75353514746787,1.58115111178609,0,0,0,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0.304464949114599,0.23467170806371,0.21183207086382,0,0,0,0,0,0,0.291480836629851,0.18542530201051,0,0,0.185194527369712,0,0.136694227721025,0.457556346413045,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0,0,0,0,0.621339313086926,0,0,0.165458490457098,0,0.258319646955462,0,0,0,0.104859344425711,0.241584120826006,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0.201652370273681,0,0.288635524920988,0.233753804363138,0.226730383615211,2.88581739386284,0.538283139656854,0.335769232728157,0,0,0,0,0,2.82375921308533,6.90487854760765,2.29158205375759,7.04598047609119,6.85082519770642,14.3524840504043,6.07520250208625,3.60256962579376,3.62513927187364,3.62432218226274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429742108096597,0,0.220591419119515,0 | |phase1_expression=0,0,0,0.90739263392049,0,0,0,0.387369970324729,0.422366166455,0.936258105287974,0.513653904676515,0.797721589953364,0.513602189793617,0.0874204024189974,1.99865857089398,0.607425802169478,2.09868563438444,0.315462165358238,0,1.69755860719212,0,0.0992909512008853,0.522399578277871,0,0,0,0,0,0,0,0,31.1165029995219,6.1506478758457,15.8481681015439,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,5.47673941043627,2.18025156380447,2.41654801007919,3.30530828426282,3.21968769738334,1.43752564364972,0.167782606057736,0,0.336093799142464,1.54355661621568,2.29226751951005,4.64104883049698,4.24864567805155,4.7609188134483,4.43681982454325,3.38844532069132,3.55717918444456,1.7997994345628,4.94433181283487,10.6572017241915,2.99600110518405,5.37905627450176,1.03689612308478,2.70011876663381,3.15487442027073,3.99911378165325,3.53389665522582,3.67472397644862,1.91690942036473,4.5960939330501,1.10115880999389,1.91531007127782,3.84016333140609,3.16527090552465,2.74462930807229,1.56274011167028,2.51264699101243,3.37657566019008,2.13917546887534,2.06240009831567,3.13217697758026,1.67759501242771,0,0.529000920747499,0.289864488701678,0.860423876981386,2.03991400112325,3.77792234146472,11.0461990966104,12.0967259516281,0,0,0,0,0,0,2.54805239706646,0,2.38140145112336,1.26679932737549,3.53867111510348,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0.130120442962704,0.229902104433473,0,0.150704817835715,0,0,0,0,0,0.567318240503458,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0.568326998791185,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0,0,0,0,16.5870412333199,5.4390568381871,0,0,0,0.117211686592203,0,0,0.631016438832513,2.73307121007647,2.58508077279359,2.86762557543062,2.89638276307112,1.41538265394416,3.23848561339915,1.75353514746787,1.58115111178609,0,0,0,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0.304464949114599,0.23467170806371,0.21183207086382,0,0,0,0,0,0,0.291480836629851,0.18542530201051,0,0,0.185194527369712,0,0.136694227721025,0.457556346413045,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0,0,0,0,0.621339313086926,0,0,0.165458490457098,0,0.258319646955462,0,0,0,0.104859344425711,0.241584120826006,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0.201652370273681,0,0.288635524920988,0.233753804363138,0.226730383615211,2.88581739386284,0.538283139656854,0.335769232728157,0,0,0,0,0,2.82375921308533,6.90487854760765,2.29158205375759,7.04598047609119,6.85082519770642,14.3524840504043,6.07520250208625,3.60256962579376,3.62513927187364,3.62432218226274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429742108096597,0,0.220591419119515,0 | ||
|short_description=p1@ENSMUST00000082679 | |||
}} | }} |
Latest revision as of 19:25, 4 August 2015
Short description: | p1@ENSMUST00000082679 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000082679_5end |
Coexpression cluster: | MCL_coexpression_mm9:896 |
Association with transcript: | 0bp_to_ENSMUST00000082679_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 8.75e-34 | 43 |
ectodermal cell | 9.43e-33 | 44 |
neurectodermal cell | 9.43e-33 | 44 |
embryonic cell | 3.30e-32 | 70 |
neuron | 1.71e-27 | 33 |
neuronal stem cell | 1.71e-27 | 33 |
neuroblast | 1.71e-27 | 33 |
electrically signaling cell | 1.71e-27 | 33 |
electrically responsive cell | 2.90e-27 | 39 |
electrically active cell | 2.90e-27 | 39 |
somatic stem cell | 5.08e-27 | 91 |
multi fate stem cell | 5.08e-27 | 91 |
stem cell | 9.92e-26 | 97 |
CNS neuron (sensu Vertebrata) | 7.62e-23 | 23 |
neuroblast (sensu Vertebrata) | 7.62e-23 | 23 |
oligodendrocyte precursor cell | 3.77e-09 | 8 |
motile cell | 3.81e-09 | 54 |
myeloid lineage restricted progenitor cell | 4.37e-09 | 13 |
migratory neural crest cell | 5.47e-07 | 10 |
neuron associated cell | 5.47e-07 | 10 |
glial cell (sensu Vertebrata) | 5.47e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 5.47e-07 | 10 |
glial cell | 5.47e-07 | 10 |
glioblast | 5.47e-07 | 10 |
glioblast (sensu Vertebrata) | 5.47e-07 | 10 |
oligodendrocyte | 5.73e-07 | 6 |
macroglial cell | 5.73e-07 | 6 |
astrocyte | 5.73e-07 | 6 |
autonomic neuron | 6.15e-07 | 9 |
myeloid cell | 6.53e-07 | 16 |
neuron of cerebral cortex | 6.55e-07 | 6 |