FF:11292-117A5: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005201 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008522;DRR009394;DRZ000819;DRZ002204;DRZ012169;DRZ013554 | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0003126,UBERON:0002100,UBERON:0000064,UBERON:0004119,UBERON:0000466,UBERON:0000062,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003103,UBERON:0009569,UBERON:0005178,UBERON:0000072,UBERON:0005177,UBERON:0000464,UBERON:0001005,UBERON:0005181,UBERON:0010317,UBERON:0007196,UBERON:0000065,UBERON:0001558,UBERON:0001004,UBERON:0002224,UBERON:0000915 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0002202,CL:0000255,CL:0002076,CL:0002632,CL:0002368,CL:0000307 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000189 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Tracheal%2520Epithelial%2520Cells%252c%2520donor1.CNhs11092.11292-117A5.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Tracheal%2520Epithelial%2520Cells%252c%2520donor1.CNhs11092.11292-117A5.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Tracheal%2520Epithelial%2520Cells%252c%2520donor1.CNhs11092.11292-117A5.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Tracheal%2520Epithelial%2520Cells%252c%2520donor1.CNhs11092.11292-117A5.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Tracheal%2520Epithelial%2520Cells%252c%2520donor1.CNhs11092.11292-117A5.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11292-117A5 | |id=FF:11292-117A5 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000189 | ||
|is_obsolete= | |||
|library_id=CNhs11092 | |||
|library_id_phase_based=2:CNhs11092 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11292 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11292 | |||
|name=Tracheal Epithelial Cells, donor1 | |name=Tracheal Epithelial Cells, donor1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11092,LSID724,release008,COMPLETED | |profile_hcage=CNhs11092,LSID724,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10009,,, | |profile_srnaseq=SRhi10009,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=117 | |rna_box=117 | ||
|rna_catalog_number=CA504-R10a | |rna_catalog_number=CA504-R10a | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|sample_age=50 | |sample_age=50 | ||
|sample_category=primary cells | |||
|sample_cell_catalog=N/A | |sample_cell_catalog=N/A | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity=C | |sample_ethnicity=C | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;8.04103539739054e-256!GO:0005737;cytoplasm;3.24792605903393e-205!GO:0043226;organelle;4.12891673311835e-198!GO:0043229;intracellular organelle;1.59743401729626e-197!GO:0043231;intracellular membrane-bound organelle;4.674887994471e-186!GO:0043227;membrane-bound organelle;8.44636359944671e-186!GO:0044422;organelle part;2.14693523547927e-148!GO:0044446;intracellular organelle part;6.5804970871823e-147!GO:0044444;cytoplasmic part;1.54361300121947e-134!GO:0032991;macromolecular complex;1.10857505260389e-100!GO:0044238;primary metabolic process;2.21201934522415e-91!GO:0044237;cellular metabolic process;3.17385733078853e-91!GO:0030529;ribonucleoprotein complex;8.39578566467357e-91!GO:0043170;macromolecule metabolic process;4.44768069454653e-81!GO:0005515;protein binding;9.21665660203917e-77!GO:0043233;organelle lumen;7.94444028326118e-76!GO:0031974;membrane-enclosed lumen;7.94444028326118e-76!GO:0005739;mitochondrion;5.20495085298707e-73!GO:0044428;nuclear part;1.92460377014813e-72!GO:0005634;nucleus;5.64521496545439e-72!GO:0003723;RNA binding;2.20127772029225e-66!GO:0005840;ribosome;6.6086979895536e-58!GO:0006412;translation;4.91519743010627e-57!GO:0019538;protein metabolic process;2.8538735112114e-55!GO:0009058;biosynthetic process;1.21010056162532e-51!GO:0031090;organelle membrane;4.00820741508183e-51!GO:0003735;structural constituent of ribosome;8.67670841944662e-51!GO:0043234;protein complex;9.66821658856329e-50!GO:0044249;cellular biosynthetic process;1.17494985509592e-48!GO:0006396;RNA processing;1.19813068429435e-48!GO:0016043;cellular component organization and biogenesis;1.67405773395734e-48!GO:0044429;mitochondrial part;3.17960940560572e-48!GO:0044267;cellular protein metabolic process;4.1516706090389e-48!GO:0044260;cellular macromolecule metabolic process;1.4283790194873e-47!GO:0015031;protein transport;3.56355205796292e-46!GO:0033036;macromolecule localization;1.57665831934737e-45!GO:0031981;nuclear lumen;5.88076747743009e-45!GO:0009059;macromolecule biosynthetic process;1.61606865128851e-44!GO:0005829;cytosol;2.51608738410452e-43!GO:0043283;biopolymer metabolic process;2.58525304733725e-43!GO:0033279;ribosomal subunit;6.57985687193935e-43!GO:0045184;establishment of protein localization;1.6647762757142e-42!GO:0008104;protein localization;2.08627902255376e-42!GO:0031967;organelle envelope;3.15754501013004e-42!GO:0031975;envelope;6.29035774732148e-42!GO:0043228;non-membrane-bound organelle;8.1600098758129e-42!GO:0043232;intracellular non-membrane-bound organelle;8.1600098758129e-42!GO:0010467;gene expression;9.78891556755514e-40!GO:0065003;macromolecular complex assembly;2.49661300999543e-37!GO:0046907;intracellular transport;2.8425871079264e-36!GO:0016071;mRNA metabolic process;2.35021542436135e-35!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.10185326197113e-35!GO:0008380;RNA splicing;1.83502074388539e-33!GO:0006996;organelle organization and biogenesis;3.26127989386066e-33!GO:0006886;intracellular protein transport;9.61063128766611e-33!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.11047874856425e-32!GO:0022607;cellular component assembly;2.65151664480499e-32!GO:0006397;mRNA processing;4.60977371865371e-31!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.26049943060974e-30!GO:0005740;mitochondrial envelope;2.58045229215979e-30!GO:0031966;mitochondrial membrane;5.0382888486662e-28!GO:0019866;organelle inner membrane;8.07186684802661e-27!GO:0005654;nucleoplasm;1.59336485193419e-26!GO:0006259;DNA metabolic process;4.517997763251e-26!GO:0005681;spliceosome;1.17298145102538e-25!GO:0005743;mitochondrial inner membrane;2.58100930641795e-25!GO:0044445;cytosolic part;1.84288466973387e-24!GO:0051649;establishment of cellular localization;6.85083717932156e-24!GO:0051641;cellular localization;1.00864169315258e-23!GO:0015934;large ribosomal subunit;2.07775247016663e-22!GO:0031980;mitochondrial lumen;5.43175283795771e-22!GO:0005759;mitochondrial matrix;5.43175283795771e-22!GO:0015935;small ribosomal subunit;1.82720184465051e-21!GO:0012505;endomembrane system;2.99329714647984e-21!GO:0007049;cell cycle;3.2241277822915e-21!GO:0044451;nucleoplasm part;3.5799076310097e-21!GO:0016874;ligase activity;4.2529860678694e-21!GO:0044455;mitochondrial membrane part;5.32355723784984e-21!GO:0006119;oxidative phosphorylation;5.33747436772441e-21!GO:0000166;nucleotide binding;6.0866488054556e-21!GO:0006457;protein folding;9.35256319483141e-21!GO:0005730;nucleolus;1.32198195701878e-20!GO:0016462;pyrophosphatase activity;4.0742451688898e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;5.07264449674913e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;6.99496892575353e-19!GO:0005783;endoplasmic reticulum;2.03987150624247e-18!GO:0048770;pigment granule;3.28224419352562e-18!GO:0042470;melanosome;3.28224419352562e-18!GO:0022618;protein-RNA complex assembly;4.7317667009903e-18!GO:0017111;nucleoside-triphosphatase activity;6.51307241926461e-18!GO:0003676;nucleic acid binding;1.22890283116089e-17!GO:0006605;protein targeting;3.50545016076764e-17!GO:0005761;mitochondrial ribosome;4.86123338207635e-17!GO:0000313;organellar ribosome;4.86123338207635e-17!GO:0051186;cofactor metabolic process;5.25297794676455e-17!GO:0006512;ubiquitin cycle;7.04976580784776e-17!GO:0043285;biopolymer catabolic process;1.56490889104737e-16!GO:0044265;cellular macromolecule catabolic process;2.25261407465784e-16!GO:0044432;endoplasmic reticulum part;5.94806518233538e-16!GO:0005746;mitochondrial respiratory chain;6.11812078795904e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;6.84253265637217e-16!GO:0008134;transcription factor binding;7.92245794497226e-16!GO:0000502;proteasome complex (sensu Eukaryota);9.00126000566771e-16!GO:0019941;modification-dependent protein catabolic process;9.82125421246521e-16!GO:0043632;modification-dependent macromolecule catabolic process;9.82125421246521e-16!GO:0006511;ubiquitin-dependent protein catabolic process;1.0451713006213e-15!GO:0022402;cell cycle process;1.04576515500935e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.0511114226421e-15!GO:0009057;macromolecule catabolic process;1.40472487385479e-15!GO:0016070;RNA metabolic process;1.47343083995635e-15!GO:0044257;cellular protein catabolic process;1.84440929929415e-15!GO:0042254;ribosome biogenesis and assembly;2.05588186822663e-15!GO:0044248;cellular catabolic process;4.09897951343351e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;5.2162667157551e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);5.50547604554235e-15!GO:0043412;biopolymer modification;7.19722478711269e-15!GO:0000278;mitotic cell cycle;9.78264400435701e-15!GO:0017076;purine nucleotide binding;9.8738123117178e-15!GO:0032553;ribonucleotide binding;1.06908539665916e-14!GO:0032555;purine ribonucleotide binding;1.06908539665916e-14!GO:0030163;protein catabolic process;1.07029095257511e-14!GO:0005794;Golgi apparatus;1.48242367175363e-14!GO:0012501;programmed cell death;1.48242367175363e-14!GO:0006732;coenzyme metabolic process;1.94384960130559e-14!GO:0008135;translation factor activity, nucleic acid binding;2.24461925523107e-14!GO:0050136;NADH dehydrogenase (quinone) activity;2.46902875116824e-14!GO:0003954;NADH dehydrogenase activity;2.46902875116824e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.46902875116824e-14!GO:0006915;apoptosis;2.99394967153165e-14!GO:0006974;response to DNA damage stimulus;1.06157694603747e-13!GO:0051082;unfolded protein binding;1.11120414519203e-13!GO:0006461;protein complex assembly;2.10332195334736e-13!GO:0006464;protein modification process;2.16111177189491e-13!GO:0048193;Golgi vesicle transport;3.93501226937971e-13!GO:0000398;nuclear mRNA splicing, via spliceosome;7.42842920729673e-13!GO:0000375;RNA splicing, via transesterification reactions;7.42842920729673e-13!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;7.42842920729673e-13!GO:0008219;cell death;8.44647028307765e-13!GO:0016265;death;8.44647028307765e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;8.66431629420975e-13!GO:0009055;electron carrier activity;8.80562718267712e-13!GO:0042775;organelle ATP synthesis coupled electron transport;1.2057832589282e-12!GO:0042773;ATP synthesis coupled electron transport;1.2057832589282e-12!GO:0005635;nuclear envelope;1.68643424792064e-12!GO:0030964;NADH dehydrogenase complex (quinone);1.90663290618111e-12!GO:0045271;respiratory chain complex I;1.90663290618111e-12!GO:0005747;mitochondrial respiratory chain complex I;1.90663290618111e-12!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.93998493440107e-12!GO:0006399;tRNA metabolic process;3.63709694643863e-12!GO:0005789;endoplasmic reticulum membrane;4.54256133801913e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;5.9340221673367e-12!GO:0016192;vesicle-mediated transport;6.39954368009659e-12!GO:0005524;ATP binding;9.62091889367915e-12!GO:0006913;nucleocytoplasmic transport;1.0475095516739e-11!GO:0008565;protein transporter activity;1.44649471594214e-11!GO:0043687;post-translational protein modification;1.59910691113035e-11!GO:0005694;chromosome;1.62302170434361e-11!GO:0032559;adenyl ribonucleotide binding;1.62962379872719e-11!GO:0006413;translational initiation;1.8049064525356e-11!GO:0030554;adenyl nucleotide binding;1.9902745679522e-11!GO:0003743;translation initiation factor activity;2.07793182055464e-11!GO:0051169;nuclear transport;2.36359538560288e-11!GO:0031965;nuclear membrane;2.39639608352197e-11!GO:0000087;M phase of mitotic cell cycle;3.20917522839605e-11!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.97391508240872e-11!GO:0007067;mitosis;5.09724598865154e-11!GO:0051276;chromosome organization and biogenesis;6.53916507925527e-11!GO:0006446;regulation of translational initiation;6.86888041786872e-11!GO:0000074;regulation of progression through cell cycle;7.37673651856038e-11!GO:0006281;DNA repair;7.80896772640815e-11!GO:0044453;nuclear membrane part;7.81500285674295e-11!GO:0051726;regulation of cell cycle;1.00736991328455e-10!GO:0006325;establishment and/or maintenance of chromatin architecture;1.62839990265063e-10!GO:0016604;nuclear body;1.75633015150441e-10!GO:0044427;chromosomal part;2.43983305703855e-10!GO:0009056;catabolic process;2.46639061330674e-10!GO:0003712;transcription cofactor activity;2.81583630612709e-10!GO:0006364;rRNA processing;3.6587393974605e-10!GO:0043067;regulation of programmed cell death;3.92551037140618e-10!GO:0016072;rRNA metabolic process;4.31329094228136e-10!GO:0042981;regulation of apoptosis;4.66660389696329e-10!GO:0008639;small protein conjugating enzyme activity;4.77615045957001e-10!GO:0006323;DNA packaging;5.35905032433649e-10!GO:0009259;ribonucleotide metabolic process;6.38064612508584e-10!GO:0009719;response to endogenous stimulus;6.95698985109524e-10!GO:0006260;DNA replication;7.48213069046695e-10!GO:0017038;protein import;7.50976550461967e-10!GO:0022403;cell cycle phase;8.33204024768509e-10!GO:0005793;ER-Golgi intermediate compartment;8.47809989789061e-10!GO:0051188;cofactor biosynthetic process;9.68248404111572e-10!GO:0004842;ubiquitin-protein ligase activity;1.03243786026201e-09!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.43526671593072e-09!GO:0004812;aminoacyl-tRNA ligase activity;1.43526671593072e-09!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.43526671593072e-09!GO:0019787;small conjugating protein ligase activity;1.52856078484515e-09!GO:0006366;transcription from RNA polymerase II promoter;1.60065597197337e-09!GO:0006163;purine nucleotide metabolic process;1.63231253249766e-09!GO:0043038;amino acid activation;2.58253661908483e-09!GO:0006418;tRNA aminoacylation for protein translation;2.58253661908483e-09!GO:0043039;tRNA aminoacylation;2.58253661908483e-09!GO:0007005;mitochondrion organization and biogenesis;2.64934168094172e-09!GO:0048475;coated membrane;2.90719983821301e-09!GO:0030117;membrane coat;2.90719983821301e-09!GO:0005643;nuclear pore;3.22161652955213e-09!GO:0009150;purine ribonucleotide metabolic process;4.29415865561659e-09!GO:0065002;intracellular protein transport across a membrane;5.49667895824314e-09!GO:0016881;acid-amino acid ligase activity;5.88829900043291e-09!GO:0051246;regulation of protein metabolic process;7.77500849269509e-09!GO:0006164;purine nucleotide biosynthetic process;8.61227053932063e-09!GO:0009260;ribonucleotide biosynthetic process;8.65197423629623e-09!GO:0048523;negative regulation of cellular process;9.52093157894408e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.00581512301179e-08!GO:0042623;ATPase activity, coupled;1.19197242426755e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.48402317852394e-08!GO:0051301;cell division;1.48402317852394e-08!GO:0016887;ATPase activity;1.8304741137489e-08!GO:0009141;nucleoside triphosphate metabolic process;1.83548286535213e-08!GO:0065004;protein-DNA complex assembly;2.10702170636189e-08!GO:0009152;purine ribonucleotide biosynthetic process;2.19854063567022e-08!GO:0030120;vesicle coat;2.39281214546084e-08!GO:0030662;coated vesicle membrane;2.39281214546084e-08!GO:0000785;chromatin;2.51639494306447e-08!GO:0016607;nuclear speck;3.29616350521346e-08!GO:0030532;small nuclear ribonucleoprotein complex;3.64689548717935e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;3.82402893595052e-08!GO:0005768;endosome;4.25580072787825e-08!GO:0009199;ribonucleoside triphosphate metabolic process;4.89193033911783e-08!GO:0016740;transferase activity;5.19177129314286e-08!GO:0009108;coenzyme biosynthetic process;5.6253097434102e-08!GO:0009060;aerobic respiration;5.96111213878163e-08!GO:0000279;M phase;6.02347548830963e-08!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;6.32267512200161e-08!GO:0003924;GTPase activity;7.11586704104244e-08!GO:0007249;I-kappaB kinase/NF-kappaB cascade;7.2821616067088e-08!GO:0016491;oxidoreductase activity;7.38694579906025e-08!GO:0009142;nucleoside triphosphate biosynthetic process;7.88144946843933e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;7.88144946843933e-08!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;9.71978613374158e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;9.96822165667894e-08!GO:0009144;purine nucleoside triphosphate metabolic process;9.96822165667894e-08!GO:0015986;ATP synthesis coupled proton transport;1.03714141246722e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.03714141246722e-07!GO:0004386;helicase activity;1.03714141246722e-07!GO:0006333;chromatin assembly or disassembly;1.19302213041904e-07!GO:0016779;nucleotidyltransferase activity;1.21923714683609e-07!GO:0050794;regulation of cellular process;1.23312208412597e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.41221018221649e-07!GO:0045333;cellular respiration;1.6335152588333e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.66180369319382e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.66180369319382e-07!GO:0046930;pore complex;1.96755302392542e-07!GO:0006888;ER to Golgi vesicle-mediated transport;2.16592074501187e-07!GO:0050657;nucleic acid transport;2.20876154633175e-07!GO:0051236;establishment of RNA localization;2.20876154633175e-07!GO:0050658;RNA transport;2.20876154633175e-07!GO:0043069;negative regulation of programmed cell death;2.27428252728171e-07!GO:0048519;negative regulation of biological process;2.60825233353662e-07!GO:0006403;RNA localization;2.84922211926453e-07!GO:0008026;ATP-dependent helicase activity;3.95892867528038e-07!GO:0043066;negative regulation of apoptosis;5.64156774769899e-07!GO:0051170;nuclear import;6.22426015029917e-07!GO:0032446;protein modification by small protein conjugation;7.02927748042783e-07!GO:0006334;nucleosome assembly;7.31250134417538e-07!GO:0043623;cellular protein complex assembly;7.37251032068882e-07!GO:0006916;anti-apoptosis;8.52713222449293e-07!GO:0016567;protein ubiquitination;8.64666015075828e-07!GO:0019829;cation-transporting ATPase activity;1.11684415888631e-06!GO:0046034;ATP metabolic process;1.14781762876927e-06!GO:0006099;tricarboxylic acid cycle;1.16181380158973e-06!GO:0046356;acetyl-CoA catabolic process;1.16181380158973e-06!GO:0006752;group transfer coenzyme metabolic process;1.33604270171017e-06!GO:0009117;nucleotide metabolic process;1.36937115686712e-06!GO:0005839;proteasome core complex (sensu Eukaryota);1.38942992707925e-06!GO:0044431;Golgi apparatus part;1.59379820430496e-06!GO:0006606;protein import into nucleus;1.65794468324883e-06!GO:0006754;ATP biosynthetic process;1.66804810974339e-06!GO:0006753;nucleoside phosphate metabolic process;1.66804810974339e-06!GO:0009109;coenzyme catabolic process;1.9881507332316e-06!GO:0016787;hydrolase activity;1.9881507332316e-06!GO:0031497;chromatin assembly;2.46102380912512e-06!GO:0005762;mitochondrial large ribosomal subunit;2.65872495338034e-06!GO:0000315;organellar large ribosomal subunit;2.65872495338034e-06!GO:0003899;DNA-directed RNA polymerase activity;2.81899660254109e-06!GO:0003697;single-stranded DNA binding;3.45526242417054e-06!GO:0005525;GTP binding;3.52084313842593e-06!GO:0051187;cofactor catabolic process;3.74417180233946e-06!GO:0006084;acetyl-CoA metabolic process;4.04592439276384e-06!GO:0000245;spliceosome assembly;4.8940961952909e-06!GO:0016853;isomerase activity;5.61556274341803e-06!GO:0045454;cell redox homeostasis;5.69210055377889e-06!GO:0045259;proton-transporting ATP synthase complex;6.15741615434384e-06!GO:0043566;structure-specific DNA binding;6.78605370105729e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;6.8310378044541e-06!GO:0005667;transcription factor complex;7.77281144314594e-06!GO:0015078;hydrogen ion transmembrane transporter activity;8.58548478412928e-06!GO:0051028;mRNA transport;8.62391440281058e-06!GO:0004298;threonine endopeptidase activity;9.40263186627943e-06!GO:0048522;positive regulation of cellular process;1.0043463104521e-05!GO:0015630;microtubule cytoskeleton;1.18448065582891e-05!GO:0006793;phosphorus metabolic process;1.22827493540051e-05!GO:0006796;phosphate metabolic process;1.22827493540051e-05!GO:0016469;proton-transporting two-sector ATPase complex;1.46899799533803e-05!GO:0031252;leading edge;1.48502226777781e-05!GO:0006613;cotranslational protein targeting to membrane;1.70031274924255e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.75060735057008e-05!GO:0000314;organellar small ribosomal subunit;1.77831608846675e-05!GO:0005763;mitochondrial small ribosomal subunit;1.77831608846675e-05!GO:0016568;chromatin modification;1.88480664828922e-05!GO:0005770;late endosome;2.23067870978274e-05!GO:0030118;clathrin coat;2.58622041253438e-05!GO:0003724;RNA helicase activity;2.62618830165731e-05!GO:0044440;endosomal part;2.63213377442143e-05!GO:0010008;endosome membrane;2.63213377442143e-05!GO:0003714;transcription corepressor activity;2.73037746715132e-05!GO:0045786;negative regulation of progression through cell cycle;2.89457681842259e-05!GO:0016023;cytoplasmic membrane-bound vesicle;3.00003087246647e-05!GO:0000139;Golgi membrane;3.12415195256486e-05!GO:0006091;generation of precursor metabolites and energy;3.14230082358774e-05!GO:0031988;membrane-bound vesicle;3.25604453414923e-05!GO:0051427;hormone receptor binding;3.34220458214278e-05!GO:0003713;transcription coactivator activity;3.65816917031035e-05!GO:0005798;Golgi-associated vesicle;3.81189450702893e-05!GO:0008654;phospholipid biosynthetic process;3.81257899897742e-05!GO:0005788;endoplasmic reticulum lumen;4.12999068503053e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;4.26880061492909e-05!GO:0016564;transcription repressor activity;4.66339957921213e-05!GO:0016859;cis-trans isomerase activity;4.66339957921213e-05!GO:0032561;guanyl ribonucleotide binding;4.72834145479395e-05!GO:0019001;guanyl nucleotide binding;4.72834145479395e-05!GO:0009967;positive regulation of signal transduction;5.22570485906363e-05!GO:0031324;negative regulation of cellular metabolic process;5.51071671491445e-05!GO:0043021;ribonucleoprotein binding;5.61250750562829e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;5.97832844812158e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;6.22031722123182e-05!GO:0035257;nuclear hormone receptor binding;6.82309669091826e-05!GO:0005819;spindle;7.54955083402844e-05!GO:0006839;mitochondrial transport;8.90822531371533e-05!GO:0019899;enzyme binding;9.29653880333537e-05!GO:0042802;identical protein binding;0.000100738435555737!GO:0031968;organelle outer membrane;0.000100738435555737!GO:0000151;ubiquitin ligase complex;0.00010091537968563!GO:0006626;protein targeting to mitochondrion;0.000109457633157033!GO:0005905;coated pit;0.000110809543244238!GO:0005773;vacuole;0.000117513097613255!GO:0005813;centrosome;0.000125843186507844!GO:0031982;vesicle;0.000126085612724169!GO:0019867;outer membrane;0.000131583702374413!GO:0050789;regulation of biological process;0.000133487572816891!GO:0007243;protein kinase cascade;0.000146943264935014!GO:0030119;AP-type membrane coat adaptor complex;0.000156074864154871!GO:0065009;regulation of a molecular function;0.000156074864154871!GO:0030867;rough endoplasmic reticulum membrane;0.000166018920440527!GO:0008033;tRNA processing;0.000171488729488545!GO:0005769;early endosome;0.000173701201942156!GO:0030880;RNA polymerase complex;0.000173820996373587!GO:0031410;cytoplasmic vesicle;0.000181334417976819!GO:0016126;sterol biosynthetic process;0.000185502819068117!GO:0016310;phosphorylation;0.000189002196282864!GO:0016563;transcription activator activity;0.000193592100978801!GO:0000786;nucleosome;0.00020226892432053!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000210076296609393!GO:0030131;clathrin adaptor complex;0.000217513760578454!GO:0051168;nuclear export;0.000222664169879941!GO:0009892;negative regulation of metabolic process;0.000231835343795312!GO:0006612;protein targeting to membrane;0.000237824071019431!GO:0005741;mitochondrial outer membrane;0.000238584068087572!GO:0051329;interphase of mitotic cell cycle;0.000266496923863622!GO:0033116;ER-Golgi intermediate compartment membrane;0.000270537500476906!GO:0007010;cytoskeleton organization and biogenesis;0.000285993843579615!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000293538206891876!GO:0043681;protein import into mitochondrion;0.000320813129551495!GO:0048471;perinuclear region of cytoplasm;0.000321816032073509!GO:0030132;clathrin coat of coated pit;0.000342549581376013!GO:0008610;lipid biosynthetic process;0.000364929676370319!GO:0006261;DNA-dependent DNA replication;0.000366426868327107!GO:0030036;actin cytoskeleton organization and biogenesis;0.00038396509512274!GO:0005048;signal sequence binding;0.000389362555765469!GO:0007006;mitochondrial membrane organization and biogenesis;0.00039827949431915!GO:0005815;microtubule organizing center;0.000409075964198792!GO:0000323;lytic vacuole;0.000415637853526703!GO:0005764;lysosome;0.000415637853526703!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.000428229047427212!GO:0000428;DNA-directed RNA polymerase complex;0.000428229047427212!GO:0007088;regulation of mitosis;0.000448397108027006!GO:0008092;cytoskeletal protein binding;0.000455826187973657!GO:0005885;Arp2/3 protein complex;0.000460560087705781!GO:0006082;organic acid metabolic process;0.000471983330369348!GO:0019752;carboxylic acid metabolic process;0.000473246146439988!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0004785257415488!GO:0051325;interphase;0.000488301751907137!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000494239530612248!GO:0005791;rough endoplasmic reticulum;0.00053418721854741!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000551288960714197!GO:0031072;heat shock protein binding;0.000571966460470861!GO:0016363;nuclear matrix;0.000600519936663195!GO:0008250;oligosaccharyl transferase complex;0.000600758406024038!GO:0008632;apoptotic program;0.000638821781961304!GO:0008186;RNA-dependent ATPase activity;0.000670524977093506!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000721411535425888!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00075615336725504!GO:0043065;positive regulation of apoptosis;0.000770481322324356!GO:0000049;tRNA binding;0.000882641298572143!GO:0051920;peroxiredoxin activity;0.000899598577069409!GO:0048518;positive regulation of biological process;0.000901175951759621!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000919915247070503!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000922237615757225!GO:0044452;nucleolar part;0.00095950028332381!GO:0016044;membrane organization and biogenesis;0.000964489162907009!GO:0015980;energy derivation by oxidation of organic compounds;0.000964489162907009!GO:0004576;oligosaccharyl transferase activity;0.000972590120425949!GO:0030176;integral to endoplasmic reticulum membrane;0.00097556447699471!GO:0007264;small GTPase mediated signal transduction;0.000976782831215529!GO:0043068;positive regulation of programmed cell death;0.000994407693839986!GO:0030658;transport vesicle membrane;0.00102338815960032!GO:0016481;negative regulation of transcription;0.00103564067973297!GO:0001726;ruffle;0.0010376472390357!GO:0050662;coenzyme binding;0.0010424584279739!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00104645504608589!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00114269047807829!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00114269047807829!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00114269047807829!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00114269047807829!GO:0046474;glycerophospholipid biosynthetic process;0.00116971666022455!GO:0051252;regulation of RNA metabolic process;0.00116971666022455!GO:0000075;cell cycle checkpoint;0.00120089291462079!GO:0006383;transcription from RNA polymerase III promoter;0.00122395938912496!GO:0006891;intra-Golgi vesicle-mediated transport;0.00129745927317886!GO:0006520;amino acid metabolic process;0.00137955752815425!GO:0006414;translational elongation;0.0014784716686152!GO:0043488;regulation of mRNA stability;0.00147951026375016!GO:0043487;regulation of RNA stability;0.00147951026375016!GO:0006695;cholesterol biosynthetic process;0.00151290165936683!GO:0000059;protein import into nucleus, docking;0.00152245674509092!GO:0046483;heterocycle metabolic process;0.00154324159340888!GO:0004004;ATP-dependent RNA helicase activity;0.00165336759718862!GO:0051789;response to protein stimulus;0.00165336759718862!GO:0006986;response to unfolded protein;0.00165336759718862!GO:0030029;actin filament-based process;0.00168079558752228!GO:0006402;mRNA catabolic process;0.00168079558752228!GO:0048037;cofactor binding;0.00170863731935105!GO:0019843;rRNA binding;0.00189306599123753!GO:0030031;cell projection biogenesis;0.00189978675283116!GO:0048468;cell development;0.00198670914738474!GO:0007051;spindle organization and biogenesis;0.0020786720864279!GO:0046489;phosphoinositide biosynthetic process;0.00208849489416823!GO:0030663;COPI coated vesicle membrane;0.0020913587463282!GO:0030126;COPI vesicle coat;0.0020913587463282!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00210207731062091!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00216257465483958!GO:0003690;double-stranded DNA binding;0.0021785914374564!GO:0006979;response to oxidative stress;0.00225132219684235!GO:0018196;peptidyl-asparagine modification;0.00232555080597247!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00232555080597247!GO:0005684;U2-dependent spliceosome;0.00236806856981579!GO:0048500;signal recognition particle;0.00260336612448452!GO:0003729;mRNA binding;0.00264999522804182!GO:0045893;positive regulation of transcription, DNA-dependent;0.00266050358599063!GO:0006401;RNA catabolic process;0.00267275496044906!GO:0030125;clathrin vesicle coat;0.00269601171212581!GO:0030665;clathrin coated vesicle membrane;0.00269601171212581!GO:0051087;chaperone binding;0.00279008455673709!GO:0006417;regulation of translation;0.00302640258011143!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00310620625589946!GO:0003684;damaged DNA binding;0.00312924381269528!GO:0009165;nucleotide biosynthetic process;0.00316863999633065!GO:0008139;nuclear localization sequence binding;0.00335173032864779!GO:0030660;Golgi-associated vesicle membrane;0.00339792246904992!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00347855304526246!GO:0045941;positive regulation of transcription;0.00353875257253186!GO:0046467;membrane lipid biosynthetic process;0.00416967043075131!GO:0015631;tubulin binding;0.00416967043075131!GO:0019222;regulation of metabolic process;0.00435482530249815!GO:0030137;COPI-coated vesicle;0.00435542890605357!GO:0030133;transport vesicle;0.0044075213105628!GO:0006650;glycerophospholipid metabolic process;0.00443937631599281!GO:0035258;steroid hormone receptor binding;0.00447653528400347!GO:0005657;replication fork;0.00453225114538961!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00472707133882538!GO:0017166;vinculin binding;0.00509345437392291!GO:0050790;regulation of catalytic activity;0.00521739107401693!GO:0051540;metal cluster binding;0.00525557719452167!GO:0051536;iron-sulfur cluster binding;0.00525557719452167!GO:0009116;nucleoside metabolic process;0.00564601454864486!GO:0051098;regulation of binding;0.00580768715526118!GO:0008652;amino acid biosynthetic process;0.00580768715526118!GO:0008312;7S RNA binding;0.0060224945092701!GO:0005149;interleukin-1 receptor binding;0.00625601420309407!GO:0007050;cell cycle arrest;0.00629892595520309!GO:0048487;beta-tubulin binding;0.0064411204965578!GO:0051287;NAD binding;0.00666708819019998!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00692411054384943!GO:0045047;protein targeting to ER;0.00692411054384943!GO:0006118;electron transport;0.00716107876009627!GO:0030134;ER to Golgi transport vesicle;0.00719581968723358!GO:0006611;protein export from nucleus;0.00724366331152276!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00735966290637809!GO:0016197;endosome transport;0.00741153931217933!GO:0006595;polyamine metabolic process;0.00741153931217933!GO:0006352;transcription initiation;0.00744913998409744!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00749051802937146!GO:0016272;prefoldin complex;0.00779131141797756!GO:0006289;nucleotide-excision repair;0.00789020280432776!GO:0008361;regulation of cell size;0.00814288440889082!GO:0030503;regulation of cell redox homeostasis;0.00840649378246597!GO:0006917;induction of apoptosis;0.00848584118232194!GO:0003711;transcription elongation regulator activity;0.00851667297425008!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.00858535059287049!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00864873489608526!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00864873489608526!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00864873489608526!GO:0008180;signalosome;0.00866657903867229!GO:0005856;cytoskeleton;0.00866657903867229!GO:0030384;phosphoinositide metabolic process;0.00895246888468544!GO:0009112;nucleobase metabolic process;0.00908184117975393!GO:0016741;transferase activity, transferring one-carbon groups;0.00908561977935146!GO:0043022;ribosome binding;0.00917635459662101!GO:0008094;DNA-dependent ATPase activity;0.00921877717280891!GO:0006405;RNA export from nucleus;0.0093302094029346!GO:0030027;lamellipodium;0.00937622185544956!GO:0051128;regulation of cellular component organization and biogenesis;0.00949168052846779!GO:0008168;methyltransferase activity;0.00958270292679667!GO:0045045;secretory pathway;0.00967709869230991!GO:0016251;general RNA polymerase II transcription factor activity;0.00967709869230991!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00968647175538296!GO:0048144;fibroblast proliferation;0.00975903951233352!GO:0048145;regulation of fibroblast proliferation;0.00975903951233352!GO:0005758;mitochondrial intermembrane space;0.00983250033420534!GO:0032984;macromolecular complex disassembly;0.00994191404266242!GO:0004674;protein serine/threonine kinase activity;0.00997540885369642!GO:0048146;positive regulation of fibroblast proliferation;0.0100181326495606!GO:0016049;cell growth;0.010040856627235!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.010107228474934!GO:0015399;primary active transmembrane transporter activity;0.010107228474934!GO:0051101;regulation of DNA binding;0.0102226931472561!GO:0016791;phosphoric monoester hydrolase activity;0.0105980841179812!GO:0005832;chaperonin-containing T-complex;0.0108036193561213!GO:0006950;response to stress;0.0111056821797847!GO:0012502;induction of programmed cell death;0.0111241421442899!GO:0008637;apoptotic mitochondrial changes;0.0111278423503933!GO:0030521;androgen receptor signaling pathway;0.0115522742104614!GO:0006749;glutathione metabolic process;0.0115522742104614!GO:0030127;COPII vesicle coat;0.0117158059314122!GO:0012507;ER to Golgi transport vesicle membrane;0.0117158059314122!GO:0000096;sulfur amino acid metabolic process;0.0122140596431839!GO:0030659;cytoplasmic vesicle membrane;0.012356932091671!GO:0043624;cellular protein complex disassembly;0.0129342268297414!GO:0051052;regulation of DNA metabolic process;0.0129644695659899!GO:0031326;regulation of cellular biosynthetic process;0.012985454644842!GO:0000775;chromosome, pericentric region;0.012985454644842!GO:0031970;organelle envelope lumen;0.01389859909049!GO:0003682;chromatin binding;0.0139584177511194!GO:0015992;proton transport;0.0139584177511194!GO:0031902;late endosome membrane;0.0139642581982141!GO:0001558;regulation of cell growth;0.0142206349998688!GO:0005874;microtubule;0.0143891039710657!GO:0031529;ruffle organization and biogenesis;0.0144665032080899!GO:0030833;regulation of actin filament polymerization;0.0146297231240673!GO:0008243;plasminogen activator activity;0.0151914441276285!GO:0009166;nucleotide catabolic process;0.0152942967953284!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0153082670368596!GO:0006354;RNA elongation;0.015642778609159!GO:0009303;rRNA transcription;0.0156625836981028!GO:0005869;dynactin complex;0.0156847789323354!GO:0016311;dephosphorylation;0.0156847789323354!GO:0043241;protein complex disassembly;0.0158464649027321!GO:0006818;hydrogen transport;0.0158643105806985!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0159078610829073!GO:0015002;heme-copper terminal oxidase activity;0.0159078610829073!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0159078610829073!GO:0004129;cytochrome-c oxidase activity;0.0159078610829073!GO:0032508;DNA duplex unwinding;0.0159078610829073!GO:0032392;DNA geometric change;0.0159078610829073!GO:0008022;protein C-terminus binding;0.0160568908476066!GO:0016125;sterol metabolic process;0.0162379214415617!GO:0030145;manganese ion binding;0.0164068991169408!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.0165680317726867!GO:0004721;phosphoprotein phosphatase activity;0.0168176774589035!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0169677035674924!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.0170123972919612!GO:0003746;translation elongation factor activity;0.0171711167746695!GO:0030032;lamellipodium biogenesis;0.0172599376218408!GO:0006497;protein amino acid lipidation;0.0174218923419528!GO:0007093;mitotic cell cycle checkpoint;0.0174481579879236!GO:0045334;clathrin-coated endocytic vesicle;0.0174481579879236!GO:0045892;negative regulation of transcription, DNA-dependent;0.0174481579879236!GO:0065007;biological regulation;0.0175104699336939!GO:0009889;regulation of biosynthetic process;0.0175303776674371!GO:0000082;G1/S transition of mitotic cell cycle;0.0178991133550598!GO:0000209;protein polyubiquitination;0.0179886761946902!GO:0046822;regulation of nucleocytoplasmic transport;0.0188006684090632!GO:0006733;oxidoreduction coenzyme metabolic process;0.0189101110383684!GO:0006506;GPI anchor biosynthetic process;0.0191356899454261!GO:0005637;nuclear inner membrane;0.0196087025433828!GO:0007021;tubulin folding;0.0197388219558777!GO:0006740;NADPH regeneration;0.0200211316191446!GO:0006098;pentose-phosphate shunt;0.0200211316191446!GO:0006302;double-strand break repair;0.0202096751976906!GO:0005862;muscle thin filament tropomyosin;0.0202777462717202!GO:0006144;purine base metabolic process;0.020743241954969!GO:0035035;histone acetyltransferase binding;0.0213810939618097!GO:0006007;glucose catabolic process;0.0221217475726334!GO:0045792;negative regulation of cell size;0.0224268156647428!GO:0006730;one-carbon compound metabolic process;0.0229017103728718!GO:0004722;protein serine/threonine phosphatase activity;0.0233757286870796!GO:0016584;nucleosome positioning;0.0235180563624354!GO:0008234;cysteine-type peptidase activity;0.0240824623567771!GO:0006376;mRNA splice site selection;0.0241599660193996!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0241599660193996!GO:0006643;membrane lipid metabolic process;0.0241761137830457!GO:0051539;4 iron, 4 sulfur cluster binding;0.024601310006412!GO:0030308;negative regulation of cell growth;0.024601310006412!GO:0030128;clathrin coat of endocytic vesicle;0.024601310006412!GO:0030669;clathrin-coated endocytic vesicle membrane;0.024601310006412!GO:0030122;AP-2 adaptor complex;0.024601310006412!GO:0004518;nuclease activity;0.0246456592820337!GO:0006505;GPI anchor metabolic process;0.024851725703554!GO:0042158;lipoprotein biosynthetic process;0.0248759991459393!GO:0006509;membrane protein ectodomain proteolysis;0.0250418067861961!GO:0033619;membrane protein proteolysis;0.0250418067861961!GO:0022890;inorganic cation transmembrane transporter activity;0.0250418067861961!GO:0006607;NLS-bearing substrate import into nucleus;0.0250694963956707!GO:0004680;casein kinase activity;0.0252529117392489!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0255106921654678!GO:0008538;proteasome activator activity;0.0258157221569046!GO:0016408;C-acyltransferase activity;0.0259463766322925!GO:0030041;actin filament polymerization;0.0259463766322925!GO:0003678;DNA helicase activity;0.0259811580813371!GO:0051338;regulation of transferase activity;0.0260046664802487!GO:0046983;protein dimerization activity;0.0260046664802487!GO:0000086;G2/M transition of mitotic cell cycle;0.0262721923722137!GO:0006519;amino acid and derivative metabolic process;0.026584309140748!GO:0006984;ER-nuclear signaling pathway;0.0266044361581442!GO:0043284;biopolymer biosynthetic process;0.0266907300399803!GO:0022411;cellular component disassembly;0.0266907300399803!GO:0044433;cytoplasmic vesicle part;0.0266907300399803!GO:0051272;positive regulation of cell motility;0.0268725659463487!GO:0040017;positive regulation of locomotion;0.0268725659463487!GO:0009119;ribonucleoside metabolic process;0.0268725659463487!GO:0048660;regulation of smooth muscle cell proliferation;0.0269060973316129!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.027223142200653!GO:0000339;RNA cap binding;0.027223142200653!GO:0006284;base-excision repair;0.02725282445783!GO:0031272;regulation of pseudopodium formation;0.02725282445783!GO:0031269;pseudopodium formation;0.02725282445783!GO:0031344;regulation of cell projection organization and biogenesis;0.02725282445783!GO:0031268;pseudopodium organization and biogenesis;0.02725282445783!GO:0031346;positive regulation of cell projection organization and biogenesis;0.02725282445783!GO:0031274;positive regulation of pseudopodium formation;0.02725282445783!GO:0000776;kinetochore;0.0273004257826202!GO:0032981;mitochondrial respiratory chain complex I assembly;0.027447614803433!GO:0010257;NADH dehydrogenase complex assembly;0.027447614803433!GO:0033108;mitochondrial respiratory chain complex assembly;0.027447614803433!GO:0006268;DNA unwinding during replication;0.0278809352775849!GO:0008287;protein serine/threonine phosphatase complex;0.0283160295356456!GO:0046966;thyroid hormone receptor binding;0.028323483457024!GO:0031124;mRNA 3'-end processing;0.0283705810099214!GO:0007034;vacuolar transport;0.0285457200044521!GO:0007052;mitotic spindle organization and biogenesis;0.0285457200044521!GO:0000287;magnesium ion binding;0.0289622638393872!GO:0042770;DNA damage response, signal transduction;0.0291009628157929!GO:0046519;sphingoid metabolic process;0.0295566393768555!GO:0050750;low-density lipoprotein receptor binding;0.0296092059322633!GO:0009451;RNA modification;0.0303918348787481!GO:0005774;vacuolar membrane;0.0305444822431806!GO:0003756;protein disulfide isomerase activity;0.0307231369339848!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0307231369339848!GO:0001836;release of cytochrome c from mitochondria;0.0312585848013434!GO:0051537;2 iron, 2 sulfur cluster binding;0.0315525338512639!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0316824841368638!GO:0006778;porphyrin metabolic process;0.0316824841368638!GO:0033013;tetrapyrrole metabolic process;0.0316824841368638!GO:0051716;cellular response to stimulus;0.0318918912136143!GO:0006779;porphyrin biosynthetic process;0.0324337041589248!GO:0033014;tetrapyrrole biosynthetic process;0.0324337041589248!GO:0030433;ER-associated protein catabolic process;0.0330836968190132!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0330836968190132!GO:0008426;protein kinase C inhibitor activity;0.0338334162874517!GO:0045926;negative regulation of growth;0.0338977725681357!GO:0043189;H4/H2A histone acetyltransferase complex;0.0341988218840426!GO:0031301;integral to organelle membrane;0.0342242327973946!GO:0032507;maintenance of cellular protein localization;0.0346159243841941!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.0347062463474673!GO:0033673;negative regulation of kinase activity;0.0347113807495274!GO:0006469;negative regulation of protein kinase activity;0.0347113807495274!GO:0044255;cellular lipid metabolic process;0.0351393408100575!GO:0007265;Ras protein signal transduction;0.0359677792215596!GO:0008097;5S rRNA binding;0.0366743019356345!GO:0005744;mitochondrial inner membrane presequence translocase complex;0.0366747839042458!GO:0035267;NuA4 histone acetyltransferase complex;0.0366747839042458!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0371723452407445!GO:0015036;disulfide oxidoreductase activity;0.0373411587400222!GO:0012506;vesicle membrane;0.03774852144431!GO:0030911;TPR domain binding;0.0384011698991444!GO:0030508;thiol-disulfide exchange intermediate activity;0.0384437326290868!GO:0043414;biopolymer methylation;0.0384437326290868!GO:0004527;exonuclease activity;0.0391294959160242!GO:0008601;protein phosphatase type 2A regulator activity;0.0401567858149439!GO:0008213;protein amino acid alkylation;0.0405435591320869!GO:0006479;protein amino acid methylation;0.0405435591320869!GO:0006767;water-soluble vitamin metabolic process;0.0415481688370365!GO:0005784;translocon complex;0.0415481688370365!GO:0031371;ubiquitin conjugating enzyme complex;0.042336485258402!GO:0044262;cellular carbohydrate metabolic process;0.0424238110034137!GO:0008047;enzyme activator activity;0.0435414950181152!GO:0008629;induction of apoptosis by intracellular signals;0.0437788801177344!GO:0006644;phospholipid metabolic process;0.0444901873519435!GO:0006672;ceramide metabolic process;0.0445299160539122!GO:0030216;keratinocyte differentiation;0.0446898655798855!GO:0051348;negative regulation of transferase activity;0.0447998902935122!GO:0043549;regulation of kinase activity;0.0448804949634494!GO:0006378;mRNA polyadenylation;0.0458256568476785!GO:0050681;androgen receptor binding;0.0462917475736919!GO:0007004;telomere maintenance via telomerase;0.0464991381629946!GO:0008299;isoprenoid biosynthetic process;0.0467368601960557!GO:0022406;membrane docking;0.0472529515791059!GO:0048278;vesicle docking;0.0472529515791059!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0472529515791059!GO:0030518;steroid hormone receptor signaling pathway;0.047700984368672!GO:0008017;microtubule binding;0.0477111869851626!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.047956728803819!GO:0006310;DNA recombination;0.0481832449357653!GO:0043154;negative regulation of caspase activity;0.0492758942111496 | |||
|sample_id=11292 | |sample_id=11292 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 100: | ||
|sample_tissue=trachea | |sample_tissue=trachea | ||
|top_motifs=TP53:2.28453204493;VSX1,2:2.03901056338;TBX4,5:1.98192688553;ZEB1:1.78424128607;SNAI1..3:1.53891665673;ADNP_IRX_SIX_ZHX:1.52800332627;ZNF148:1.15953525421;PDX1:1.01010526454;PPARG:0.960405317757;HAND1,2:0.955069041649;ONECUT1,2:0.929596372815;NKX2-3_NKX2-5:0.916386828865;POU1F1:0.908066260652;NKX2-2,8:0.858240534674;CRX:0.826553537269;CEBPA,B_DDIT3:0.822269940481;MYOD1:0.819947761289;TEF:0.797366397322;POU2F1..3:0.773201746709;NANOG:0.772771601486;NR5A1,2:0.767770340998;FOXQ1:0.74055630566;TBP:0.697097875868;TEAD1:0.691835214149;CDC5L:0.63137241934;FOS_FOS{B,L1}_JUN{B,D}:0.627751821163;ELK1,4_GABP{A,B1}:0.591729252039;XCPE1{core}:0.552428666826;NFIL3:0.541450100199;ZNF423:0.498647318878;BACH2:0.475901285801;ARID5B:0.472051470176;bHLH_family:0.465185151435;MTF1:0.462731035607;TFCP2:0.462595241503;POU5F1:0.461328982087;FOXM1:0.452829003229;GTF2A1,2:0.427594396914;FOXL1:0.417260628115;LMO2:0.407099827175;STAT5{A,B}:0.394696872144;SP1:0.392889750754;EBF1:0.383309978152;FOSL2:0.379921435141;IKZF1:0.375859297935;NKX3-2:0.305334892822;FOX{I1,J2}:0.294867340747;PBX1:0.247287961454;GLI1..3:0.244844229991;LHX3,4:0.228150082864;HLF:0.222816029312;LEF1_TCF7_TCF7L1,2:0.202998574617;RBPJ:0.197765440597;ELF1,2,4:0.188861933778;ZNF238:0.160835604587;HOX{A4,D4}:0.159379706138;PAX4:0.146895955446;GFI1B:0.136994156459;AR:0.130683010846;POU6F1:0.128330973733;PAX1,9:0.126674200882;TLX1..3_NFIC{dimer}:0.122316925567;NFE2:0.113762101653;ZNF143:0.103284529377;TFAP2{A,C}:0.0879571106675;HES1:0.0795885347024;SOX17:0.0705342246447;NFY{A,B,C}:0.0582341635752;YY1:0.0395556112236;GZF1:0.0381670131354;PAX8:0.0270160830142;TLX2:0.0219529812157;HIF1A:0.0015845351419;HOX{A5,B5}:0.000175581106412;OCT4_SOX2{dimer}:-0.0353556714692;FOX{F1,F2,J1}:-0.0500624296;E2F1..5:-0.063857255428;SMAD1..7,9:-0.070822317421;SOX{8,9,10}:-0.0743343221048;ETS1,2:-0.0836543677517;GFI1:-0.0874871356404;NFKB1_REL_RELA:-0.0899028764041;KLF4:-0.0902456306992;NR1H4:-0.0905392215604;HNF4A_NR2F1,2:-0.0923794120421;PITX1..3:-0.106884871254;T:-0.108512634218;MYB:-0.11453139277;TFDP1:-0.115005800829;GATA6:-0.117075022938;NR6A1:-0.118617638098;HNF1A:-0.124940591193;NKX2-1,4:-0.133163303292;HSF1,2:-0.136745675464;FOXD3:-0.138389744203;PAX2:-0.151042435376;NRF1:-0.1674496343;TFAP4:-0.172174567629;MYBL2:-0.172293151278;GCM1,2:-0.175461577331;NKX6-1,2:-0.183643365858;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.207183277367;AHR_ARNT_ARNT2:-0.21662581649;SOX2:-0.217156410249;REST:-0.230079212605;MAZ:-0.236235480061;EN1,2:-0.241970809384;ATF2:-0.259666859882;FOXA2:-0.261898565533;ATF4:-0.283824753704;IRF7:-0.29596355991;JUN:-0.2973204969;ZBTB6:-0.297826459787;ATF5_CREB3:-0.306912946064;ZIC1..3:-0.318209901062;NFIX:-0.338614618888;SPIB:-0.349785479917;EP300:-0.35298697392;GTF2I:-0.378705775421;FOXP1:-0.383650054371;CREB1:-0.388012598059;NHLH1,2:-0.397874497419;UFEwm:-0.403195032769;SPI1:-0.42417033296;MED-1{core}:-0.425184822157;FOXN1:-0.427073023634;NR3C1:-0.43145705269;RXR{A,B,G}:-0.434234324442;RUNX1..3:-0.438411183836;NFE2L2:-0.438922858908;CUX2:-0.439455857431;PRRX1,2:-0.44916421124;ESR1:-0.477756626815;HIC1:-0.485756186547;RORA:-0.48648079828;SPZ1:-0.492862913058;EVI1:-0.493363435231;RFX2..5_RFXANK_RFXAP:-0.500096988881;FOXO1,3,4:-0.500670306764;RREB1:-0.505376708372;STAT2,4,6:-0.509488856539;PAX5:-0.512754565201;HOX{A6,A7,B6,B7}:-0.524213055609;RFX1:-0.537042291334;HMX1:-0.54300803152;AIRE:-0.555959108516;HMGA1,2:-0.568524909478;MEF2{A,B,C,D}:-0.569145829197;HBP1_HMGB_SSRP1_UBTF:-0.581568671612;ZNF384:-0.601660729486;ZFP161:-0.603286319085;PAX6:-0.614984434554;MAFB:-0.621588810266;POU3F1..4:-0.63756938809;DBP:-0.640990722797;TFAP2B:-0.647876379547;SRF:-0.674948329673;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.681830805021;NFATC1..3:-0.697503690919;NKX3-1:-0.715922448929;ALX1:-0.769629650216;ALX4:-0.774969762811;SOX5:-0.777599502442;MZF1:-0.779559464876;ZBTB16:-0.783987275614;TGIF1:-0.843692701672;PRDM1:-0.848924173074;NFE2L1:-0.86273430105;FOX{D1,D2}:-0.877060569824;RXRA_VDR{dimer}:-0.877553792375;TAL1_TCF{3,4,12}:-0.882490232589;TOPORS:-0.883088173047;BREu{core}:-0.90428393157;MYFfamily:-0.914488807054;CDX1,2,4:-0.926132361017;PAX3,7:-0.93353594245;IRF1,2:-0.994964420413;EGR1..3:-0.995373016193;MTE{core}:-0.997980342191;ATF6:-1.00461544863;BPTF:-1.01890802897;PATZ1:-1.02027580424;FOXP3:-1.03126559295;DMAP1_NCOR{1,2}_SMARC:-1.04519873989;ESRRA:-1.07645832948;IKZF2:-1.10584823642;STAT1,3:-1.13627871035;NANOG{mouse}:-1.15920868202;GATA4:-1.16528438671;HOXA9_MEIS1:-1.17154885652;SREBF1,2:-1.26079919633;XBP1:-1.42811414232 | |top_motifs=TP53:2.28453204493;VSX1,2:2.03901056338;TBX4,5:1.98192688553;ZEB1:1.78424128607;SNAI1..3:1.53891665673;ADNP_IRX_SIX_ZHX:1.52800332627;ZNF148:1.15953525421;PDX1:1.01010526454;PPARG:0.960405317757;HAND1,2:0.955069041649;ONECUT1,2:0.929596372815;NKX2-3_NKX2-5:0.916386828865;POU1F1:0.908066260652;NKX2-2,8:0.858240534674;CRX:0.826553537269;CEBPA,B_DDIT3:0.822269940481;MYOD1:0.819947761289;TEF:0.797366397322;POU2F1..3:0.773201746709;NANOG:0.772771601486;NR5A1,2:0.767770340998;FOXQ1:0.74055630566;TBP:0.697097875868;TEAD1:0.691835214149;CDC5L:0.63137241934;FOS_FOS{B,L1}_JUN{B,D}:0.627751821163;ELK1,4_GABP{A,B1}:0.591729252039;XCPE1{core}:0.552428666826;NFIL3:0.541450100199;ZNF423:0.498647318878;BACH2:0.475901285801;ARID5B:0.472051470176;bHLH_family:0.465185151435;MTF1:0.462731035607;TFCP2:0.462595241503;POU5F1:0.461328982087;FOXM1:0.452829003229;GTF2A1,2:0.427594396914;FOXL1:0.417260628115;LMO2:0.407099827175;STAT5{A,B}:0.394696872144;SP1:0.392889750754;EBF1:0.383309978152;FOSL2:0.379921435141;IKZF1:0.375859297935;NKX3-2:0.305334892822;FOX{I1,J2}:0.294867340747;PBX1:0.247287961454;GLI1..3:0.244844229991;LHX3,4:0.228150082864;HLF:0.222816029312;LEF1_TCF7_TCF7L1,2:0.202998574617;RBPJ:0.197765440597;ELF1,2,4:0.188861933778;ZNF238:0.160835604587;HOX{A4,D4}:0.159379706138;PAX4:0.146895955446;GFI1B:0.136994156459;AR:0.130683010846;POU6F1:0.128330973733;PAX1,9:0.126674200882;TLX1..3_NFIC{dimer}:0.122316925567;NFE2:0.113762101653;ZNF143:0.103284529377;TFAP2{A,C}:0.0879571106675;HES1:0.0795885347024;SOX17:0.0705342246447;NFY{A,B,C}:0.0582341635752;YY1:0.0395556112236;GZF1:0.0381670131354;PAX8:0.0270160830142;TLX2:0.0219529812157;HIF1A:0.0015845351419;HOX{A5,B5}:0.000175581106412;OCT4_SOX2{dimer}:-0.0353556714692;FOX{F1,F2,J1}:-0.0500624296;E2F1..5:-0.063857255428;SMAD1..7,9:-0.070822317421;SOX{8,9,10}:-0.0743343221048;ETS1,2:-0.0836543677517;GFI1:-0.0874871356404;NFKB1_REL_RELA:-0.0899028764041;KLF4:-0.0902456306992;NR1H4:-0.0905392215604;HNF4A_NR2F1,2:-0.0923794120421;PITX1..3:-0.106884871254;T:-0.108512634218;MYB:-0.11453139277;TFDP1:-0.115005800829;GATA6:-0.117075022938;NR6A1:-0.118617638098;HNF1A:-0.124940591193;NKX2-1,4:-0.133163303292;HSF1,2:-0.136745675464;FOXD3:-0.138389744203;PAX2:-0.151042435376;NRF1:-0.1674496343;TFAP4:-0.172174567629;MYBL2:-0.172293151278;GCM1,2:-0.175461577331;NKX6-1,2:-0.183643365858;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.207183277367;AHR_ARNT_ARNT2:-0.21662581649;SOX2:-0.217156410249;REST:-0.230079212605;MAZ:-0.236235480061;EN1,2:-0.241970809384;ATF2:-0.259666859882;FOXA2:-0.261898565533;ATF4:-0.283824753704;IRF7:-0.29596355991;JUN:-0.2973204969;ZBTB6:-0.297826459787;ATF5_CREB3:-0.306912946064;ZIC1..3:-0.318209901062;NFIX:-0.338614618888;SPIB:-0.349785479917;EP300:-0.35298697392;GTF2I:-0.378705775421;FOXP1:-0.383650054371;CREB1:-0.388012598059;NHLH1,2:-0.397874497419;UFEwm:-0.403195032769;SPI1:-0.42417033296;MED-1{core}:-0.425184822157;FOXN1:-0.427073023634;NR3C1:-0.43145705269;RXR{A,B,G}:-0.434234324442;RUNX1..3:-0.438411183836;NFE2L2:-0.438922858908;CUX2:-0.439455857431;PRRX1,2:-0.44916421124;ESR1:-0.477756626815;HIC1:-0.485756186547;RORA:-0.48648079828;SPZ1:-0.492862913058;EVI1:-0.493363435231;RFX2..5_RFXANK_RFXAP:-0.500096988881;FOXO1,3,4:-0.500670306764;RREB1:-0.505376708372;STAT2,4,6:-0.509488856539;PAX5:-0.512754565201;HOX{A6,A7,B6,B7}:-0.524213055609;RFX1:-0.537042291334;HMX1:-0.54300803152;AIRE:-0.555959108516;HMGA1,2:-0.568524909478;MEF2{A,B,C,D}:-0.569145829197;HBP1_HMGB_SSRP1_UBTF:-0.581568671612;ZNF384:-0.601660729486;ZFP161:-0.603286319085;PAX6:-0.614984434554;MAFB:-0.621588810266;POU3F1..4:-0.63756938809;DBP:-0.640990722797;TFAP2B:-0.647876379547;SRF:-0.674948329673;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.681830805021;NFATC1..3:-0.697503690919;NKX3-1:-0.715922448929;ALX1:-0.769629650216;ALX4:-0.774969762811;SOX5:-0.777599502442;MZF1:-0.779559464876;ZBTB16:-0.783987275614;TGIF1:-0.843692701672;PRDM1:-0.848924173074;NFE2L1:-0.86273430105;FOX{D1,D2}:-0.877060569824;RXRA_VDR{dimer}:-0.877553792375;TAL1_TCF{3,4,12}:-0.882490232589;TOPORS:-0.883088173047;BREu{core}:-0.90428393157;MYFfamily:-0.914488807054;CDX1,2,4:-0.926132361017;PAX3,7:-0.93353594245;IRF1,2:-0.994964420413;EGR1..3:-0.995373016193;MTE{core}:-0.997980342191;ATF6:-1.00461544863;BPTF:-1.01890802897;PATZ1:-1.02027580424;FOXP3:-1.03126559295;DMAP1_NCOR{1,2}_SMARC:-1.04519873989;ESRRA:-1.07645832948;IKZF2:-1.10584823642;STAT1,3:-1.13627871035;NANOG{mouse}:-1.15920868202;GATA4:-1.16528438671;HOXA9_MEIS1:-1.17154885652;SREBF1,2:-1.26079919633;XBP1:-1.42811414232 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11292-117A5;search_select_hide=table117:FF:11292-117A5 | |||
}} | }} | ||
Latest revision as of 16:31, 3 June 2020
| Name: | Tracheal Epithelial Cells, donor1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11092 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11092
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11092
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.3 |
| 10 | 10 | 0.788 |
| 100 | 100 | 0.343 |
| 101 | 101 | 0.0168 |
| 102 | 102 | 0.255 |
| 103 | 103 | 0.204 |
| 104 | 104 | 0.265 |
| 105 | 105 | 0.0248 |
| 106 | 106 | 0.0896 |
| 107 | 107 | 0.032 |
| 108 | 108 | 0.666 |
| 109 | 109 | 0.0015 |
| 11 | 11 | 0.108 |
| 110 | 110 | 0.0577 |
| 111 | 111 | 0.144 |
| 112 | 112 | 0.711 |
| 113 | 113 | 0.393 |
| 114 | 114 | 0.251 |
| 115 | 115 | 0.798 |
| 116 | 116 | 0.863 |
| 117 | 117 | 0.191 |
| 118 | 118 | 0.889 |
| 119 | 119 | 0.148 |
| 12 | 12 | 0.451 |
| 120 | 120 | 0.0287 |
| 121 | 121 | 0.889 |
| 122 | 122 | 0.0261 |
| 123 | 123 | 0.893 |
| 124 | 124 | 0.477 |
| 125 | 125 | 0.414 |
| 126 | 126 | 0.656 |
| 127 | 127 | 0.147 |
| 128 | 128 | 0.692 |
| 129 | 129 | 0.192 |
| 13 | 13 | 0.0127 |
| 130 | 130 | 0.751 |
| 131 | 131 | 0.555 |
| 132 | 132 | 0.414 |
| 133 | 133 | 7.85303e-4 |
| 134 | 134 | 0.343 |
| 135 | 135 | 0.989 |
| 136 | 136 | 0.164 |
| 137 | 137 | 0.189 |
| 138 | 138 | 0.887 |
| 139 | 139 | 0.965 |
| 14 | 14 | 0.88 |
| 140 | 140 | 0.456 |
| 141 | 141 | 0.426 |
| 142 | 142 | 0.262 |
| 143 | 143 | 0.853 |
| 144 | 144 | 0.074 |
| 145 | 145 | 0.116 |
| 146 | 146 | 0.00515 |
| 147 | 147 | 0.0781 |
| 148 | 148 | 0.366 |
| 149 | 149 | 0.886 |
| 15 | 15 | 0.895 |
| 150 | 150 | 0.263 |
| 151 | 151 | 0.435 |
| 152 | 152 | 0.0459 |
| 153 | 153 | 0.32 |
| 154 | 154 | 0.793 |
| 155 | 155 | 0.872 |
| 156 | 156 | 0.364 |
| 157 | 157 | 0.515 |
| 158 | 158 | 0.167 |
| 159 | 159 | 0.402 |
| 16 | 16 | 0.0798 |
| 160 | 160 | 0.169 |
| 161 | 161 | 0.655 |
| 162 | 162 | 0.216 |
| 163 | 163 | 0.909 |
| 164 | 164 | 0.364 |
| 165 | 165 | 0.497 |
| 166 | 166 | 0.304 |
| 167 | 167 | 0.452 |
| 168 | 168 | 0.549 |
| 169 | 169 | 0.0563 |
| 17 | 17 | 0.136 |
| 18 | 18 | 0.218 |
| 19 | 19 | 0.863 |
| 2 | 2 | 0.368 |
| 20 | 20 | 0.479 |
| 21 | 21 | 0.792 |
| 22 | 22 | 0.383 |
| 23 | 23 | 0.438 |
| 24 | 24 | 0.0318 |
| 25 | 25 | 0.719 |
| 26 | 26 | 0.228 |
| 27 | 27 | 0.643 |
| 28 | 28 | 0.586 |
| 29 | 29 | 0.269 |
| 3 | 3 | 0.415 |
| 30 | 30 | 0.133 |
| 31 | 31 | 0.934 |
| 32 | 32 | 0.145 |
| 33 | 33 | 0.0561 |
| 34 | 34 | 0.9 |
| 35 | 35 | 0.379 |
| 36 | 36 | 0.306 |
| 37 | 37 | 0.32 |
| 38 | 38 | 0.272 |
| 39 | 39 | 0.298 |
| 4 | 4 | 0.423 |
| 40 | 40 | 0.00949 |
| 41 | 41 | 0.455 |
| 42 | 42 | 0.395 |
| 43 | 43 | 0.526 |
| 44 | 44 | 0.761 |
| 45 | 45 | 0.225 |
| 46 | 46 | 0.59 |
| 47 | 47 | 0.155 |
| 48 | 48 | 0.032 |
| 49 | 49 | 0.856 |
| 5 | 5 | 0.724 |
| 50 | 50 | 0.366 |
| 51 | 51 | 0.96 |
| 52 | 52 | 0.581 |
| 53 | 53 | 0.524 |
| 54 | 54 | 0.791 |
| 55 | 55 | 0.792 |
| 56 | 56 | 0.337 |
| 57 | 57 | 0.226 |
| 58 | 58 | 0.762 |
| 59 | 59 | 0.246 |
| 6 | 6 | 0.35 |
| 60 | 60 | 0.281 |
| 61 | 61 | 0.529 |
| 62 | 62 | 0.962 |
| 63 | 63 | 0.107 |
| 64 | 64 | 0.242 |
| 65 | 65 | 0.476 |
| 66 | 66 | 0.168 |
| 67 | 67 | 0.778 |
| 68 | 68 | 0.454 |
| 69 | 69 | 0.696 |
| 7 | 7 | 0.182 |
| 70 | 70 | 0.0257 |
| 71 | 71 | 0.107 |
| 72 | 72 | 0.88 |
| 73 | 73 | 0.0295 |
| 74 | 74 | 0.0179 |
| 75 | 75 | 0.0821 |
| 76 | 76 | 0.817 |
| 77 | 77 | 0.0294 |
| 78 | 78 | 0.00998 |
| 79 | 79 | 0.125 |
| 8 | 8 | 0.238 |
| 80 | 80 | 0.94 |
| 81 | 81 | 0.497 |
| 82 | 82 | 0.978 |
| 83 | 83 | 0.406 |
| 84 | 84 | 0.741 |
| 85 | 85 | 0.958 |
| 86 | 86 | 0.871 |
| 87 | 87 | 0.0333 |
| 88 | 88 | 0.5 |
| 89 | 89 | 0.117 |
| 9 | 9 | 0.995 |
| 90 | 90 | 0.958 |
| 91 | 91 | 0.677 |
| 92 | 92 | 0.955 |
| 93 | 93 | 0.959 |
| 94 | 94 | 0.729 |
| 95 | 95 | 0.0607 |
| 96 | 96 | 0.82 |
| 97 | 97 | 0.811 |
| 98 | 98 | 0.762 |
| 99 | 99 | 0.0404 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11092
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0002202 (epithelial cell of tracheobronchial tree)
0000255 (eukaryotic cell)
0002076 (endo-epithelial cell)
0002632 (epithelial cell of lower respiratory tract)
0002368 (respiratory epithelial cell)
0000307 (tracheal epithelial cell)
UBERON: Anatomy
0000468 (multi-cellular organism)
0003126 (trachea)
0002100 (trunk)
0000064 (organ part)
0004119 (endoderm-derived structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003103 (compound organ)
0009569 (subdivision of trunk)
0005178 (thoracic cavity element)
0000072 (segment of respiratory tract)
0005177 (trunk region element)
0000464 (anatomical space)
0001005 (respiratory airway)
0005181 (thoracic segment organ)
0010317 (germ layer / neural crest derived structure)
0007196 (tracheobronchial tree)
0000065 (respiratory tract)
0001558 (lower respiratory tract)
0001004 (respiratory system)
0002224 (thoracic cavity)
0000915 (thoracic segment of trunk)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000189 (human tracheal epithelial cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000223 (endodermal cell)
CL:0000377 (tracheoblast)
