FF:11514-119H2: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| (25 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005699 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005699 | ||
|accession_numbers=CAGE;DRX008430;DRR009302;DRZ000727;DRZ002112;DRZ012077;DRZ013462 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX037195;DRR041561;DRZ007203 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002113,UBERON:0002100,UBERON:0000483,UBERON:0001851,UBERON:0000479,UBERON:0000064,UBERON:0000062,UBERON:0004111,UBERON:0000475,UBERON:0004120,UBERON:0006555,UBERON:0006554,UBERON:0000061,UBERON:0000465,UBERON:0003914,UBERON:0000025,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0003103,UBERON:0009569,UBERON:0000489,UBERON:0000353,UBERON:0005177,UBERON:0005172,UBERON:0010317,UBERON:0004819,UBERON:0005173,UBERON:0001285,UBERON:0000074,UBERON:0001225,UBERON:0001229,UBERON:0011143,UBERON:0001008,UBERON:0002417,UBERON:0008987,UBERON:0007684,UBERON:0000916 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0000213,CL:0002078,CL:0000215,CL:0000255,CL:0000115,CL:0000666,CL:1000746,CL:1000497,CL:0002518,CL:0002681,CL:1000449,CL:0002584,CL:1000612,CL:0002188 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000153 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 44: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Renal%2520Glomerular%2520Endothelial%2520Cells%252c%2520donor1.CNhs12074.11514-119H2.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Renal%2520Glomerular%2520Endothelial%2520Cells%252c%2520donor1.CNhs12074.11514-119H2.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Renal%2520Glomerular%2520Endothelial%2520Cells%252c%2520donor1.CNhs12074.11514-119H2.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Renal%2520Glomerular%2520Endothelial%2520Cells%252c%2520donor1.CNhs12074.11514-119H2.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Renal%2520Glomerular%2520Endothelial%2520Cells%252c%2520donor1.CNhs12074.11514-119H2.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11514-119H2 | |id=FF:11514-119H2 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000153 | ||
|is_obsolete= | |||
|library_id=CNhs12074 | |||
|library_id_phase_based=2:CNhs12074 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11514 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10012.CCGTCC.11514 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11514 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10012.CCGTCC.11514 | |||
|name=Renal Glomerular Endothelial Cells, donor1 | |name=Renal Glomerular Endothelial Cells, donor1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 65: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12074,LSID838,release011,COMPLETED | |profile_hcage=CNhs12074,LSID838,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10012,,, | |profile_srnaseq=SRhi10012,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,0.484317623512048,0,-0.27483329820609,0.383532781027489,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361844223307832,0,0,0,0,0,0.646283075046026,0,0,0.196915772279534,0,0,0,0,0,0,0,0,0,0,0,0,0.0888688858921488,0,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0.329872362058396,0,0,0,-0.0969923612426051,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.478168337488608,0,0,0,0.33421439969861,0.430423142047709,0,0,0,0,-0.0980353512377064,0.233643284856146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.096373593922461,0,0,0,-0.0216131053582358,-0.0887285494684293,0,0,0,0,0,0 | |||
|repeat_enrich_byname=0,0,0,0,-0.0980353512377064,0,0,0,0,0,0,0,0,0,0,0,-0.247178875285564,0.0181122952596016,0.270154752562075,-0.143515142523472,0,0,-0.169695470081441,0,0,0,0,0,0,0,0,0,-0.128119866952565,0,-0.0504125515893149,0,0,0,0,0,-0.305472230898407,0,0.08332555567862,-0.0683442610773682,0,0,0,0,-0.105304488305126,0,0.208992878264655,-0.0827201683234173,0.301659038400395,0.0805571111704705,-0.055712496781182,0,0,0,0.244238636868864,0.238339015599874,0,0,0.0431563292773241,0.0762339982674705,0,0,1.1817652733177,0,0.550353150084974,0.591078923058324,0,-0.0240110441663887,0,0,0,0,0,0,0,0,0,0,0,-0.0574934668214365,-0.326988596678969,-0.0304099808375785,0,0.329872362058396,0,0.19369815909286,0,0,0.141881077699692,0.293899640301575,0.0861288976844005,-0.279559527048366,0,0.212777506646346,0.359654774587462,0.723096724624407,0.172538598292799,0.497233804227295,-0.189981719549847,0.173739362969391,0.53245217231529,0.589330212541802,0.0989906168832355,0.478168337488608,0.123006604149469,-0.002939525956142,0.32182826218828,0,0,0,-0.76514378723743,0,-0.011218521529456,0.403314296283136,-0.122915397285835,0.0061565344992176,0.213594190665034,0.077130747189152,0.078157468838029,0.125403652572528,0.435992557863314,0.101456294546008,-0.4215723249037,0,0,0,0.230140507999803,-0.141276453508889,0.27760283758123,0,-0.483977461810981,0.261528100981028,0,-0.0190285333794905,0.345320270808265,0,0,-0.0636099972151528,0,0,0,0,0,0.232062237623341,-0.20961978097177,-0.232855561555545,0,0.104684148618466,0,0.268052398978782,0,-0.0997037020840423,-0.146009897457394,-0.298074152361292,0.285296472080708,0,0.252503239829419,-0.0520262153496794,0.164881665719393,0.860846284095419,-0.0584468268118252,0.0137690375383525,-0.193213418094067,0.33421439969861,-0.144304211191793,0,0.73708300625794,0,-0.139303779204296,-0.679498131621524,0.0853207801911405,0.428523080481751,0,-0.174684723848761,0,-0.261387793178089,0,0.605338966400168,0.104201902125194,-0.10941701252229,-0.573938407330149,0,0.247897212820015,1.05222631237426,0,0.242782860484279,0,0.329872362058396,0.179505278723757,0.306568245438534,-0.211650427864589,0.118594160148935,0,0.0351296803435716,0,0,-0.194459910449464,-0.235476037764389,0,-0.25196207558927,0.284226096546513,0.624252941135668,-0.115971073434934,0,0,0.179509500740503,0,0,1.08220707127572,0,0.712089359250227,-0.253326341486756,0.181940300695768,0.148960807373874,0,0,-0.177527765965176,0,-0.11101715792016,0,0,-0.0849451155696257,0.213244249068263,0,0,0,-0.061014097589615,0,0,0,0,0,0,0,-0.241101025212747,-0.024960968158052,0,0.282929938914523,0,0,0,0,0,0,0,0,-0.335612909826914,-0.113994193983767,0.392149817979839,0,0,0,0,-0.215723402553475,0.126635799963672,0,-0.131862706497632,0,0,0,0,0.243731372269185,0,0,0,0,-0.057730457053664,-0.100563994599623,0,0,0,0.467286569712293,0,0,0,0,-0.329764643357352,0,0,-0.0387409807565484,0,0.178887131531127,-0.0815818795468414,0,-0.27181579047857,0.289058923043242,0.537812657305723,0,0,0.632081878970022,0,0,-0.520777087976988,0,0,0,0,0,0,0,0,0,-0.214314512399756,0,0,0,0,0,0,0,0,0,0,0,0.0330107431453683,-0.0922240566585104,0,0,0,0,0,0,0,1.1210147199417,0.0172472214680297,0,0,0,0,0,0,0,0,-0.471425939663242,0,0,0,0,0,-0.0969923612426051,0,0,0,0,0.767065562054977,0,0,-0.277362132193514,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.123319086035448,-0.119467698792569,0,0,0,0,0,0,0,-0.27483329820609,0,0,0,0,-0.113884373708977,0,0,0,-0.104796384789156,0,0.484317623512048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437732489970716,0,0.0426648460854862,-0.0107772591136319,0,0,-0.0676921716038435,0,0,0,0,0,0,-0.031340424028527,0,0,0,0,0,0,0,0,0,0.329872362058396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0962259712900034,0,0,0,0,0,0,0,0.646283075046026,0,0,-0.0920328098005262,0,0,0,0,0,0,-0.0303932238285798,0.0466519622352485,0.0505885981768081,0,0,0,0.203198044345675,0.329872362058396,0,0.0681291948766009,0,-0.0667773874189013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361844223307832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0340113632754165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664222503045445,0,0,0,-0.213086229657044,0,0,0,0,0,0,0,0,0.515167233656259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0755565048919986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.696018896075029,0,0.245495729828369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941316110827215,0,0,0,0,-0.0476371106609188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490630363025579,0,0,0.376409833733304,0,0,0,0,0,0,0,0,0,0,0,0,-0.0613201791501264,0,0,0,0,0,0,0,0,0,0,-0.0484300422256687,0,0,0,0.329872362058396,0,0,0,0,1.46883963601849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.031514075065095,-0.0887285494684293,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.189787895078201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135239258656523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.620396418749604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.192747187844922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0076997667426909,0,0,0,0,0,0,0,-0.122695996997001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0237397835175619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0317165860483832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0797419986649781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196915772279534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164936181029198,0,0,0,-0.0499379825215864,0,0,0,0,0,0,0,0,0,0,-0.0412500915278073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252770983834574,0,0,0.28758489358128,0,-0.00593323097767585,-0.060488135437452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0400762477245316,0,0,0.0275976786053035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.280072095322966,0,0.152543984313614,-0.397074688522015,0,0,0.34061854368571,0,0,0.329872362058396,0,0,-0.174992895090299,-0.249208271123569,0,0,0,0,0,0,0,0,0,0.744240971314084,0,0,0,0,-0.0408295247396738,0,0,0,-0.0568589461625992,-0.269475635594569,0,0.136330979305835,0,0,-0.0781053106522872,0,0,0,-0.0959594073735869 | |||
|rna_box=119 | |rna_box=119 | ||
|rna_catalog_number=SC4005 | |rna_catalog_number=SC4005 | ||
| Line 56: | Line 82: | ||
|rna_tube_id=119H2 | |rna_tube_id=119H2 | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|rnaseq_library_id=SRhi10012.CCGTCC | |||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog=N/A | |sample_cell_catalog=N/A | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 97: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.19120353941453e-230!GO:0005737;cytoplasm;1.66378741494882e-177!GO:0043226;organelle;2.36087772443603e-143!GO:0043229;intracellular organelle;3.79165056011575e-143!GO:0043231;intracellular membrane-bound organelle;8.27422671578556e-141!GO:0043227;membrane-bound organelle;1.7565116434349e-140!GO:0044444;cytoplasmic part;3.11252669397605e-136!GO:0044422;organelle part;3.93370969427695e-117!GO:0044446;intracellular organelle part;4.3839205916523e-116!GO:0032991;macromolecular complex;4.17176015450923e-72!GO:0005515;protein binding;7.93257955115275e-71!GO:0005739;mitochondrion;8.81395089840655e-70!GO:0044237;cellular metabolic process;1.00509654723648e-61!GO:0030529;ribonucleoprotein complex;2.28079811872465e-61!GO:0044238;primary metabolic process;4.52268171371942e-61!GO:0043170;macromolecule metabolic process;2.57418047996141e-52!GO:0043233;organelle lumen;8.41966127647333e-51!GO:0031974;membrane-enclosed lumen;8.41966127647333e-51!GO:0031090;organelle membrane;2.74804959459606e-50!GO:0019538;protein metabolic process;2.41183371553634e-48!GO:0044429;mitochondrial part;8.73473349646842e-47!GO:0003723;RNA binding;7.76346660435924e-45!GO:0005840;ribosome;8.39265631427357e-44!GO:0044260;cellular macromolecule metabolic process;8.74201475415775e-43!GO:0044267;cellular protein metabolic process;1.98399113236169e-42!GO:0044428;nuclear part;7.1983247475033e-42!GO:0003735;structural constituent of ribosome;2.91986411064204e-40!GO:0016043;cellular component organization and biogenesis;3.04759809707097e-38!GO:0031967;organelle envelope;3.64635991360054e-38!GO:0006412;translation;3.72600619665091e-38!GO:0031975;envelope;7.60016652165367e-38!GO:0043234;protein complex;1.8045678288795e-37!GO:0005634;nucleus;5.70360921912367e-37!GO:0009058;biosynthetic process;1.1745333929331e-36!GO:0005829;cytosol;2.72371866499999e-35!GO:0033279;ribosomal subunit;2.78178436283009e-35!GO:0044249;cellular biosynthetic process;5.99256303514059e-35!GO:0005740;mitochondrial envelope;3.91466182042906e-33!GO:0009059;macromolecule biosynthetic process;1.53897706522293e-31!GO:0031966;mitochondrial membrane;2.03315811843447e-31!GO:0015031;protein transport;1.8771552207728e-30!GO:0019866;organelle inner membrane;1.95498676116717e-29!GO:0006996;organelle organization and biogenesis;2.59755286787441e-29!GO:0033036;macromolecule localization;2.63686130154793e-29!GO:0045184;establishment of protein localization;2.27825100605362e-28!GO:0008104;protein localization;6.51534521670382e-28!GO:0005743;mitochondrial inner membrane;7.88327279226782e-28!GO:0006396;RNA processing;3.3641070805212e-27!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.28218783248705e-26!GO:0031981;nuclear lumen;3.99983757429218e-26!GO:0043228;non-membrane-bound organelle;4.42348552845142e-26!GO:0043232;intracellular non-membrane-bound organelle;4.42348552845142e-26!GO:0046907;intracellular transport;7.52851656467029e-26!GO:0065003;macromolecular complex assembly;1.08716024213293e-24!GO:0043283;biopolymer metabolic process;4.6469368165923e-23!GO:0022607;cellular component assembly;2.63798782820914e-22!GO:0044445;cytosolic part;3.78579779247071e-22!GO:0016071;mRNA metabolic process;9.29726251456607e-22!GO:0006886;intracellular protein transport;1.0024645683427e-21!GO:0008380;RNA splicing;1.9248120704108e-20!GO:0006119;oxidative phosphorylation;5.08006056438697e-20!GO:0044455;mitochondrial membrane part;2.39968248358046e-19!GO:0006259;DNA metabolic process;4.31271743096701e-19!GO:0005783;endoplasmic reticulum;4.96135525671593e-19!GO:0006397;mRNA processing;6.24169240955714e-19!GO:0015934;large ribosomal subunit;3.20694823051888e-18!GO:0012505;endomembrane system;3.68173409635293e-18!GO:0015935;small ribosomal subunit;4.51624541854e-18!GO:0000166;nucleotide binding;9.95973394860991e-18!GO:0022613;ribonucleoprotein complex biogenesis and assembly;4.25472525186632e-17!GO:0031980;mitochondrial lumen;5.20050781574149e-17!GO:0005759;mitochondrial matrix;5.20050781574149e-17!GO:0051649;establishment of cellular localization;5.20050781574149e-17!GO:0007049;cell cycle;5.20050781574149e-17!GO:0051641;cellular localization;5.63045720883995e-17!GO:0005746;mitochondrial respiratory chain;8.81125924512843e-17!GO:0044432;endoplasmic reticulum part;3.40055085719469e-16!GO:0005654;nucleoplasm;8.5799372404209e-16!GO:0043412;biopolymer modification;9.6646716537899e-16!GO:0051186;cofactor metabolic process;1.05046935539614e-15!GO:0010467;gene expression;2.19191842661987e-15!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.6764445368135e-15!GO:0005794;Golgi apparatus;2.81703887135935e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.14123997318317e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;3.492161301391e-15!GO:0016462;pyrophosphatase activity;3.492161301391e-15!GO:0050136;NADH dehydrogenase (quinone) activity;7.17030884841237e-15!GO:0003954;NADH dehydrogenase activity;7.17030884841237e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;7.17030884841237e-15!GO:0006464;protein modification process;8.12848029170588e-15!GO:0048770;pigment granule;9.98080320306742e-15!GO:0042470;melanosome;9.98080320306742e-15!GO:0017111;nucleoside-triphosphatase activity;1.08924273929848e-14!GO:0016874;ligase activity;1.18502654058393e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.24003358707245e-14!GO:0005681;spliceosome;4.00338492903888e-14!GO:0006457;protein folding;5.6150038417768e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);6.92943295263706e-14!GO:0008134;transcription factor binding;1.37437344544456e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.15123905270175e-13!GO:0044451;nucleoplasm part;3.08353706110703e-13!GO:0032553;ribonucleotide binding;3.33447134736892e-13!GO:0032555;purine ribonucleotide binding;3.33447134736892e-13!GO:0006512;ubiquitin cycle;3.95792586125348e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.36273911992944e-13!GO:0006605;protein targeting;5.7003426881589e-13!GO:0042775;organelle ATP synthesis coupled electron transport;5.7003426881589e-13!GO:0042773;ATP synthesis coupled electron transport;5.7003426881589e-13!GO:0000278;mitotic cell cycle;6.53790064528762e-13!GO:0022402;cell cycle process;6.6725435247423e-13!GO:0030964;NADH dehydrogenase complex (quinone);7.4296951581853e-13!GO:0045271;respiratory chain complex I;7.4296951581853e-13!GO:0005747;mitochondrial respiratory chain complex I;7.4296951581853e-13!GO:0044265;cellular macromolecule catabolic process;7.57373628981969e-13!GO:0017076;purine nucleotide binding;9.0117225865805e-13!GO:0044248;cellular catabolic process;1.74837297305263e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.37647504406903e-12!GO:0043687;post-translational protein modification;2.57245921971877e-12!GO:0000502;proteasome complex (sensu Eukaryota);4.16304948220387e-12!GO:0005761;mitochondrial ribosome;4.90544510828303e-12!GO:0000313;organellar ribosome;4.90544510828303e-12!GO:0006732;coenzyme metabolic process;7.48729156441327e-12!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.17377110877698e-11!GO:0012501;programmed cell death;1.96482391277574e-11!GO:0009055;electron carrier activity;1.98290132263804e-11!GO:0009057;macromolecule catabolic process;2.15367981318773e-11!GO:0005789;endoplasmic reticulum membrane;2.18128496820222e-11!GO:0006915;apoptosis;2.52589267425662e-11!GO:0016192;vesicle-mediated transport;5.83177047904153e-11!GO:0043285;biopolymer catabolic process;8.25117867026781e-11!GO:0051603;proteolysis involved in cellular protein catabolic process;1.59995108352366e-10!GO:0051082;unfolded protein binding;2.09047678902156e-10!GO:0022618;protein-RNA complex assembly;2.13565396391215e-10!GO:0019941;modification-dependent protein catabolic process;2.26444393984886e-10!GO:0043632;modification-dependent macromolecule catabolic process;2.26444393984886e-10!GO:0044257;cellular protein catabolic process;2.2911551430152e-10!GO:0005730;nucleolus;2.4846727872999e-10!GO:0032559;adenyl ribonucleotide binding;3.03754733281093e-10!GO:0006325;establishment and/or maintenance of chromatin architecture;3.29770435791836e-10!GO:0005524;ATP binding;4.04473428938186e-10!GO:0006511;ubiquitin-dependent protein catabolic process;4.36792869504747e-10!GO:0008219;cell death;5.98581907776987e-10!GO:0016265;death;5.98581907776987e-10!GO:0030554;adenyl nucleotide binding;1.09603701614319e-09!GO:0051276;chromosome organization and biogenesis;1.13579909160192e-09!GO:0005793;ER-Golgi intermediate compartment;1.34433436466512e-09!GO:0044427;chromosomal part;1.48515281958317e-09!GO:0006323;DNA packaging;1.81395720262184e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;3.22802749206898e-09!GO:0000375;RNA splicing, via transesterification reactions;3.22802749206898e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.22802749206898e-09!GO:0030163;protein catabolic process;4.42599911379862e-09!GO:0003712;transcription cofactor activity;5.26817121619604e-09!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;5.74080296260764e-09!GO:0006333;chromatin assembly or disassembly;6.9572861807163e-09!GO:0051188;cofactor biosynthetic process;6.9572861807163e-09!GO:0048193;Golgi vesicle transport;6.9572861807163e-09!GO:0005694;chromosome;6.96001229247243e-09!GO:0000785;chromatin;8.07000915830199e-09!GO:0008639;small protein conjugating enzyme activity;8.9646071863879e-09!GO:0022403;cell cycle phase;8.9646071863879e-09!GO:0006461;protein complex assembly;1.1407975220641e-08!GO:0008135;translation factor activity, nucleic acid binding;1.17924805747096e-08!GO:0051726;regulation of cell cycle;1.24364803037524e-08!GO:0006974;response to DNA damage stimulus;1.55758565003626e-08!GO:0004842;ubiquitin-protein ligase activity;1.56718277765301e-08!GO:0009150;purine ribonucleotide metabolic process;1.82510974952527e-08!GO:0007067;mitosis;2.0055149072045e-08!GO:0000074;regulation of progression through cell cycle;2.23448987710165e-08!GO:0000087;M phase of mitotic cell cycle;2.23946747378937e-08!GO:0006163;purine nucleotide metabolic process;2.31880249917413e-08!GO:0030532;small nuclear ribonucleoprotein complex;2.6341468393455e-08!GO:0006793;phosphorus metabolic process;2.85559422621968e-08!GO:0006796;phosphate metabolic process;2.85559422621968e-08!GO:0016740;transferase activity;4.06655334846727e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;4.23778810045004e-08!GO:0009259;ribonucleotide metabolic process;5.23400852503914e-08!GO:0019787;small conjugating protein ligase activity;5.44613254933765e-08!GO:0016491;oxidoreductase activity;5.59944314354899e-08!GO:0009117;nucleotide metabolic process;5.73260683162148e-08!GO:0009056;catabolic process;7.84596519359751e-08!GO:0009152;purine ribonucleotide biosynthetic process;8.0678714458611e-08!GO:0017038;protein import;9.0000918296216e-08!GO:0005773;vacuole;9.50077939777096e-08!GO:0006164;purine nucleotide biosynthetic process;1.06474592654329e-07!GO:0016310;phosphorylation;1.21033278565307e-07!GO:0009199;ribonucleoside triphosphate metabolic process;1.58226075019304e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.64858510706857e-07!GO:0009141;nucleoside triphosphate metabolic process;1.68353266013174e-07!GO:0006913;nucleocytoplasmic transport;1.85998789347289e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.87513092958699e-07!GO:0016023;cytoplasmic membrane-bound vesicle;2.35634732744293e-07!GO:0015078;hydrogen ion transmembrane transporter activity;2.39233671887149e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.42674664932618e-07!GO:0009144;purine nucleoside triphosphate metabolic process;2.42674664932618e-07!GO:0048523;negative regulation of cellular process;2.60857476725287e-07!GO:0042623;ATPase activity, coupled;2.70729264194652e-07!GO:0009260;ribonucleotide biosynthetic process;3.00837025281087e-07!GO:0051169;nuclear transport;3.13836867048953e-07!GO:0031497;chromatin assembly;3.63645154604621e-07!GO:0016604;nuclear body;3.63645154604621e-07!GO:0005788;endoplasmic reticulum lumen;3.97436517682374e-07!GO:0016881;acid-amino acid ligase activity;4.09567882693697e-07!GO:0005768;endosome;4.1323618459036e-07!GO:0007005;mitochondrion organization and biogenesis;4.16130818726757e-07!GO:0009142;nucleoside triphosphate biosynthetic process;4.6066478110665e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;4.6066478110665e-07!GO:0031988;membrane-bound vesicle;4.80922640259376e-07!GO:0005635;nuclear envelope;4.98351994056495e-07!GO:0006334;nucleosome assembly;5.83061952161382e-07!GO:0043067;regulation of programmed cell death;6.52393526890082e-07!GO:0042981;regulation of apoptosis;6.81596248040272e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;7.14011788303727e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;7.14011788303727e-07!GO:0003924;GTPase activity;7.81504999091518e-07!GO:0015986;ATP synthesis coupled proton transport;7.83967319393469e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;7.83967319393469e-07!GO:0006446;regulation of translational initiation;8.15662022179298e-07!GO:0016772;transferase activity, transferring phosphorus-containing groups;8.31822515177513e-07!GO:0065004;protein-DNA complex assembly;8.9062130033072e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;9.19223922442234e-07!GO:0016887;ATPase activity;9.63590964573133e-07!GO:0030036;actin cytoskeleton organization and biogenesis;1.02196851897517e-06!GO:0009719;response to endogenous stimulus;1.02502798975738e-06!GO:0044431;Golgi apparatus part;1.02949690403872e-06!GO:0006413;translational initiation;1.09963371310666e-06!GO:0009060;aerobic respiration;1.11366523159096e-06!GO:0003743;translation initiation factor activity;1.21386880839285e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.30400675657966e-06!GO:0031252;leading edge;1.32015899344899e-06!GO:0009108;coenzyme biosynthetic process;1.36851539447812e-06!GO:0051301;cell division;1.38874876721319e-06!GO:0042254;ribosome biogenesis and assembly;1.42858037192272e-06!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.47124686188239e-06!GO:0000323;lytic vacuole;1.73676811106214e-06!GO:0005764;lysosome;1.73676811106214e-06!GO:0019829;cation-transporting ATPase activity;1.92021720075847e-06!GO:0006260;DNA replication;1.92820757887934e-06!GO:0044453;nuclear membrane part;2.00646132084028e-06!GO:0046034;ATP metabolic process;2.20063961015561e-06!GO:0006281;DNA repair;2.25114786648184e-06!GO:0016787;hydrolase activity;2.37434366404256e-06!GO:0008565;protein transporter activity;3.03900376595752e-06!GO:0048519;negative regulation of biological process;3.10385127092735e-06!GO:0005839;proteasome core complex (sensu Eukaryota);4.29959904357055e-06!GO:0000279;M phase;4.58756745248027e-06!GO:0043069;negative regulation of programmed cell death;4.58756745248027e-06!GO:0031410;cytoplasmic vesicle;4.75438914606833e-06!GO:0016469;proton-transporting two-sector ATPase complex;5.0038734658568e-06!GO:0031965;nuclear membrane;5.22043881300646e-06!GO:0015630;microtubule cytoskeleton;5.30030616073602e-06!GO:0031982;vesicle;5.4680443575337e-06!GO:0006754;ATP biosynthetic process;5.96751752373062e-06!GO:0006753;nucleoside phosphate metabolic process;5.96751752373062e-06!GO:0043066;negative regulation of apoptosis;6.07180012487842e-06!GO:0006091;generation of precursor metabolites and energy;6.51631012430419e-06!GO:0045259;proton-transporting ATP synthase complex;6.65863145963606e-06!GO:0030029;actin filament-based process;6.70873015512712e-06!GO:0006916;anti-apoptosis;7.89076457896502e-06!GO:0019899;enzyme binding;8.98141767983959e-06!GO:0006366;transcription from RNA polymerase II promoter;1.01559098758221e-05!GO:0006399;tRNA metabolic process;1.03096236093472e-05!GO:0045333;cellular respiration;1.05588708331329e-05!GO:0005770;late endosome;1.15302176791951e-05!GO:0051329;interphase of mitotic cell cycle;1.28223868880114e-05!GO:0005762;mitochondrial large ribosomal subunit;1.42593766280028e-05!GO:0000315;organellar large ribosomal subunit;1.42593766280028e-05!GO:0006099;tricarboxylic acid cycle;1.5247108537389e-05!GO:0046356;acetyl-CoA catabolic process;1.5247108537389e-05!GO:0051246;regulation of protein metabolic process;1.59284824543644e-05!GO:0016568;chromatin modification;1.6554323648515e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.91293208430953e-05!GO:0006084;acetyl-CoA metabolic process;2.31846279257729e-05!GO:0065002;intracellular protein transport across a membrane;2.3990657599142e-05!GO:0006888;ER to Golgi vesicle-mediated transport;2.52206163635042e-05!GO:0005525;GTP binding;2.56802488675007e-05!GO:0030120;vesicle coat;2.61913116496046e-05!GO:0030662;coated vesicle membrane;2.61913116496046e-05!GO:0032446;protein modification by small protein conjugation;2.76126674869169e-05!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.76642330426598e-05!GO:0004812;aminoacyl-tRNA ligase activity;2.76642330426598e-05!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.76642330426598e-05!GO:0000139;Golgi membrane;3.15480480905352e-05!GO:0016567;protein ubiquitination;3.18774982253433e-05!GO:0003714;transcription corepressor activity;3.74657202381848e-05!GO:0016044;membrane organization and biogenesis;3.74657202381848e-05!GO:0004298;threonine endopeptidase activity;3.9261300182226e-05!GO:0051325;interphase;4.12501428981029e-05!GO:0051187;cofactor catabolic process;4.4914263869756e-05!GO:0007264;small GTPase mediated signal transduction;4.72527031359671e-05!GO:0045786;negative regulation of progression through cell cycle;4.83595854484591e-05!GO:0005667;transcription factor complex;6.86491615642822e-05!GO:0005905;coated pit;6.86491615642822e-05!GO:0007010;cytoskeleton organization and biogenesis;7.05747506194115e-05!GO:0003676;nucleic acid binding;7.80720057541074e-05!GO:0042802;identical protein binding;7.81099092577914e-05!GO:0044262;cellular carbohydrate metabolic process;7.81099092577914e-05!GO:0043038;amino acid activation;7.94663984850402e-05!GO:0006418;tRNA aminoacylation for protein translation;7.94663984850402e-05!GO:0043039;tRNA aminoacylation;7.94663984850402e-05!GO:0006606;protein import into nucleus;8.88124224289752e-05!GO:0048475;coated membrane;8.9690762951117e-05!GO:0030117;membrane coat;8.9690762951117e-05!GO:0044440;endosomal part;9.01563998482974e-05!GO:0010008;endosome membrane;9.01563998482974e-05!GO:0006364;rRNA processing;9.10429987047886e-05!GO:0016607;nuclear speck;0.000102676192294109!GO:0009109;coenzyme catabolic process;0.000108626192451605!GO:0019843;rRNA binding;0.000108958881556215!GO:0051170;nuclear import;0.000115939755673813!GO:0045454;cell redox homeostasis;0.000117318736847922!GO:0016779;nucleotidyltransferase activity;0.000123588674311879!GO:0007243;protein kinase cascade;0.000126586371568344!GO:0019867;outer membrane;0.000130995162203801!GO:0031968;organelle outer membrane;0.000138056773243631!GO:0006752;group transfer coenzyme metabolic process;0.00014246774312211!GO:0009165;nucleotide biosynthetic process;0.000145764716465913!GO:0008654;phospholipid biosynthetic process;0.000148323262237499!GO:0016072;rRNA metabolic process;0.000168010423585425!GO:0005643;nuclear pore;0.000170447826906928!GO:0008632;apoptotic program;0.00018764282628195!GO:0000786;nucleosome;0.000190010006059797!GO:0065009;regulation of a molecular function;0.000205045919948386!GO:0033116;ER-Golgi intermediate compartment membrane;0.000205925068518812!GO:0032561;guanyl ribonucleotide binding;0.000206687692968672!GO:0019001;guanyl nucleotide binding;0.000206687692968672!GO:0000151;ubiquitin ligase complex;0.00020723130429394!GO:0016564;transcription repressor activity;0.000219464151860893!GO:0005813;centrosome;0.000230553802496017!GO:0000245;spliceosome assembly;0.000240208221883206!GO:0016853;isomerase activity;0.00027480927717565!GO:0008047;enzyme activator activity;0.000277041464272021!GO:0005769;early endosome;0.000291778601659488!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000293167727936933!GO:0015399;primary active transmembrane transporter activity;0.000293167727936933!GO:0001558;regulation of cell growth;0.00032515737529706!GO:0048522;positive regulation of cellular process;0.00033655248620342!GO:0046930;pore complex;0.000365555774288655!GO:0003697;single-stranded DNA binding;0.00037219015265623!GO:0005741;mitochondrial outer membrane;0.000387244518210838!GO:0030867;rough endoplasmic reticulum membrane;0.000425100060328972!GO:0005815;microtubule organizing center;0.000538837874719211!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000561457348785471!GO:0043623;cellular protein complex assembly;0.000570431920326013!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.000620892885580133!GO:0016049;cell growth;0.000673481349005657!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000680294106283084!GO:0008361;regulation of cell size;0.000733787686114421!GO:0005048;signal sequence binding;0.000772755458545505!GO:0007040;lysosome organization and biogenesis;0.000832826392035101!GO:0003713;transcription coactivator activity;0.000845079460349336!GO:0007265;Ras protein signal transduction;0.000861447828806964!GO:0050794;regulation of cellular process;0.000899660701895988!GO:0030133;transport vesicle;0.000934992543415055!GO:0008092;cytoskeletal protein binding;0.00101822337060617!GO:0008026;ATP-dependent helicase activity;0.00116577066921415!GO:0043492;ATPase activity, coupled to movement of substances;0.00123530558217439!GO:0008250;oligosaccharyl transferase complex;0.00127472904272863!GO:0004386;helicase activity;0.00133137195893586!GO:0003899;DNA-directed RNA polymerase activity;0.00135459546444891!GO:0000314;organellar small ribosomal subunit;0.00136149085122172!GO:0005763;mitochondrial small ribosomal subunit;0.00136149085122172!GO:0005774;vacuolar membrane;0.00137286833230685!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00141166034099063!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00141526034817094!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00159155696256164!GO:0016563;transcription activator activity;0.00166355851283232!GO:0006818;hydrogen transport;0.00168821831672441!GO:0015992;proton transport;0.00169251679135219!GO:0051427;hormone receptor binding;0.00172526093288594!GO:0006897;endocytosis;0.00176643303419306!GO:0010324;membrane invagination;0.00176643303419306!GO:0016070;RNA metabolic process;0.00176643303419306!GO:0043681;protein import into mitochondrion;0.0017878709619824!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0017878709619824!GO:0015002;heme-copper terminal oxidase activity;0.0017878709619824!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0017878709619824!GO:0004129;cytochrome-c oxidase activity;0.0017878709619824!GO:0030176;integral to endoplasmic reticulum membrane;0.00179611167574286!GO:0007242;intracellular signaling cascade;0.00179611167574286!GO:0016859;cis-trans isomerase activity;0.00192884933062144!GO:0005798;Golgi-associated vesicle;0.001986240908308!GO:0007033;vacuole organization and biogenesis;0.00204308107429713!GO:0016301;kinase activity;0.0021147703532161!GO:0006626;protein targeting to mitochondrion;0.0021912952902889!GO:0007006;mitochondrial membrane organization and biogenesis;0.00219131604956528!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00227568549969869!GO:0009967;positive regulation of signal transduction;0.00237390655276361!GO:0005684;U2-dependent spliceosome;0.00238071534381953!GO:0015980;energy derivation by oxidation of organic compounds;0.0023838378154355!GO:0051920;peroxiredoxin activity;0.0024181387591496!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00254067244304793!GO:0006839;mitochondrial transport;0.00257974634983689!GO:0051087;chaperone binding;0.00259599555588967!GO:0018196;peptidyl-asparagine modification;0.00259599555588967!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00259599555588967!GO:0030132;clathrin coat of coated pit;0.00280750561646907!GO:0016126;sterol biosynthetic process;0.00281421745313244!GO:0006740;NADPH regeneration;0.00287466812122381!GO:0006098;pentose-phosphate shunt;0.00287466812122381!GO:0031902;late endosome membrane;0.00290093817219052!GO:0005819;spindle;0.00303650883360466!GO:0035257;nuclear hormone receptor binding;0.00303650883360466!GO:0030027;lamellipodium;0.00305922353628751!GO:0040008;regulation of growth;0.00308714303532052!GO:0048471;perinuclear region of cytoplasm;0.00308714303532052!GO:0030041;actin filament polymerization;0.00313182238254298!GO:0044437;vacuolar part;0.00314695880479211!GO:0006778;porphyrin metabolic process;0.00314779093983456!GO:0033013;tetrapyrrole metabolic process;0.00314779093983456!GO:0005096;GTPase activator activity;0.00315532402945197!GO:0022890;inorganic cation transmembrane transporter activity;0.00315532402945197!GO:0006950;response to stress;0.00315532402945197!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00316693784269384!GO:0043566;structure-specific DNA binding;0.00320109295027048!GO:0004576;oligosaccharyl transferase activity;0.0032618098551485!GO:0004674;protein serine/threonine kinase activity;0.00326255592882206!GO:0051348;negative regulation of transferase activity;0.00354185935852048!GO:0006613;cotranslational protein targeting to membrane;0.00355836629864381!GO:0005885;Arp2/3 protein complex;0.00375749182875382!GO:0050790;regulation of catalytic activity;0.00380795935303338!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.00394719581722861!GO:0006979;response to oxidative stress;0.00400270711688568!GO:0033673;negative regulation of kinase activity;0.0040043280662231!GO:0006469;negative regulation of protein kinase activity;0.0040043280662231!GO:0005765;lysosomal membrane;0.00411216548466524!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00435170783582567!GO:0008610;lipid biosynthetic process;0.0044690105238702!GO:0043488;regulation of mRNA stability;0.00453847653316314!GO:0043487;regulation of RNA stability;0.00453847653316314!GO:0017166;vinculin binding;0.0046929568756036!GO:0051789;response to protein stimulus;0.00478837142798547!GO:0006986;response to unfolded protein;0.00478837142798547!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00489503344302!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00489503344302!GO:0043021;ribonucleoprotein binding;0.00501650878591079!GO:0001568;blood vessel development;0.00502984277728028!GO:0001726;ruffle;0.00528794131612764!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00573079286607477!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00573079286607477!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00573079286607477!GO:0006695;cholesterol biosynthetic process;0.00573079286607477!GO:0001944;vasculature development;0.00580114059300505!GO:0005874;microtubule;0.00602988988053927!GO:0046474;glycerophospholipid biosynthetic process;0.00612810331325078!GO:0031324;negative regulation of cellular metabolic process;0.00625708495237595!GO:0005791;rough endoplasmic reticulum;0.00643137388750338!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00643137388750338!GO:0000082;G1/S transition of mitotic cell cycle;0.00664190790219659!GO:0030308;negative regulation of cell growth;0.00674457982565765!GO:0003684;damaged DNA binding;0.00675624748203315!GO:0007266;Rho protein signal transduction;0.00701957185993492!GO:0008154;actin polymerization and/or depolymerization;0.0071618893369322!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00717089732167496!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00745373882818188!GO:0006509;membrane protein ectodomain proteolysis;0.00754489525828538!GO:0033619;membrane protein proteolysis;0.00754489525828538!GO:0006779;porphyrin biosynthetic process;0.00779635713207829!GO:0033014;tetrapyrrole biosynthetic process;0.00779635713207829!GO:0045792;negative regulation of cell size;0.00810060346714207!GO:0006118;electron transport;0.00828514797887853!GO:0042168;heme metabolic process;0.00828960531067587!GO:0048487;beta-tubulin binding;0.00913521270639485!GO:0030880;RNA polymerase complex;0.00936307283653459!GO:0008637;apoptotic mitochondrial changes;0.00970561422259391!GO:0030145;manganese ion binding;0.0097697019910552!GO:0048518;positive regulation of biological process;0.0100112447674121!GO:0043281;regulation of caspase activity;0.0102321145731906!GO:0051287;NAD binding;0.0106326728985345!GO:0030658;transport vesicle membrane;0.0108814030689863!GO:0045926;negative regulation of growth;0.0108814030689863!GO:0043086;negative regulation of catalytic activity;0.0108814030689863!GO:0050657;nucleic acid transport;0.0110612554524732!GO:0051236;establishment of RNA localization;0.0110612554524732!GO:0050658;RNA transport;0.0110612554524732!GO:0006733;oxidoreduction coenzyme metabolic process;0.0111216664657533!GO:0006082;organic acid metabolic process;0.0111718614187397!GO:0008139;nuclear localization sequence binding;0.0115630252159797!GO:0006403;RNA localization;0.011597382684573!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.011649966971069!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0117725159907421!GO:0003724;RNA helicase activity;0.0120998626164137!GO:0006414;translational elongation;0.0121403990087838!GO:0000118;histone deacetylase complex;0.0125213557589511!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0126504728044429!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0130500095217554!GO:0009966;regulation of signal transduction;0.0132020812333317!GO:0019752;carboxylic acid metabolic process;0.0132020812333317!GO:0016272;prefoldin complex;0.0132740304302306!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0142823442798259!GO:0006739;NADP metabolic process;0.0147149798442472!GO:0005083;small GTPase regulator activity;0.0147990268372179!GO:0009892;negative regulation of metabolic process;0.0150481680855127!GO:0030659;cytoplasmic vesicle membrane;0.0153601037505156!GO:0006790;sulfur metabolic process;0.0155354551002907!GO:0003756;protein disulfide isomerase activity;0.0158215245308622!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0158215245308622!GO:0050789;regulation of biological process;0.0169115975371627!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0169741407204999!GO:0006458;'de novo' protein folding;0.0169903270155158!GO:0051084;'de novo' posttranslational protein folding;0.0169903270155158!GO:0006612;protein targeting to membrane;0.0179147456870958!GO:0046467;membrane lipid biosynthetic process;0.0180155839700599!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0180256696475878!GO:0003729;mRNA binding;0.0180485589017733!GO:0030118;clathrin coat;0.0182764961947574!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0182764961947574!GO:0031072;heat shock protein binding;0.0182764961947574!GO:0048660;regulation of smooth muscle cell proliferation;0.018597638072634!GO:0043433;negative regulation of transcription factor activity;0.0187581459483946!GO:0046489;phosphoinositide biosynthetic process;0.0188398802924893!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0188398802924893!GO:0005637;nuclear inner membrane;0.0192261431594463!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0194640699210959!GO:0000428;DNA-directed RNA polymerase complex;0.0194640699210959!GO:0051252;regulation of RNA metabolic process;0.0195020607398266!GO:0033559;unsaturated fatty acid metabolic process;0.0195451940503651!GO:0006636;unsaturated fatty acid biosynthetic process;0.0195451940503651!GO:0016125;sterol metabolic process;0.0197019206896379!GO:0006783;heme biosynthetic process;0.0198310536045618!GO:0005657;replication fork;0.0202548218308115!GO:0006807;nitrogen compound metabolic process;0.021091187713575!GO:0006650;glycerophospholipid metabolic process;0.0212376352519104!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0220426469492548!GO:0006066;alcohol metabolic process;0.0225353710120677!GO:0030660;Golgi-associated vesicle membrane;0.0228147069051082!GO:0048514;blood vessel morphogenesis;0.0237637492084163!GO:0031272;regulation of pseudopodium formation;0.0237637492084163!GO:0031269;pseudopodium formation;0.0237637492084163!GO:0031344;regulation of cell projection organization and biogenesis;0.0237637492084163!GO:0031268;pseudopodium organization and biogenesis;0.0237637492084163!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0237637492084163!GO:0031274;positive regulation of pseudopodium formation;0.0237637492084163!GO:0030125;clathrin vesicle coat;0.0237801535257865!GO:0030665;clathrin coated vesicle membrane;0.0237801535257865!GO:0007162;negative regulation of cell adhesion;0.0238092533703896!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0241741033511854!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0243001342767271!GO:0030031;cell projection biogenesis;0.0245038103158516!GO:0005975;carbohydrate metabolic process;0.0245038103158516!GO:0007050;cell cycle arrest;0.0245038103158516!GO:0004860;protein kinase inhibitor activity;0.0248356665451209!GO:0019318;hexose metabolic process;0.0251394671965854!GO:0035035;histone acetyltransferase binding;0.025587334060076!GO:0046822;regulation of nucleocytoplasmic transport;0.025587334060076!GO:0007088;regulation of mitosis;0.0259627555994934!GO:0001836;release of cytochrome c from mitochondria;0.0259627555994934!GO:0006595;polyamine metabolic process;0.0260575252030876!GO:0046483;heterocycle metabolic process;0.026220805730759!GO:0001953;negative regulation of cell-matrix adhesion;0.0264940363017928!GO:0043284;biopolymer biosynthetic process;0.0264940363017928!GO:0050662;coenzyme binding;0.0266408229195125!GO:0004177;aminopeptidase activity;0.0270640297643121!GO:0005100;Rho GTPase activator activity;0.0270640297643121!GO:0030833;regulation of actin filament polymerization;0.0270810399130001!GO:0022415;viral reproductive process;0.0274357029822542!GO:0015631;tubulin binding;0.0276123060900948!GO:0030032;lamellipodium biogenesis;0.0280263185148208!GO:0006289;nucleotide-excision repair;0.0281556802178414!GO:0030134;ER to Golgi transport vesicle;0.0281792368980645!GO:0008538;proteasome activator activity;0.0287255854950381!GO:0015036;disulfide oxidoreductase activity;0.0291926965854139!GO:0005996;monosaccharide metabolic process;0.0296154594675717!GO:0001525;angiogenesis;0.0296154594675717!GO:0040029;regulation of gene expression, epigenetic;0.0296988063007069!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0310070297015875!GO:0006402;mRNA catabolic process;0.0312364593880699!GO:0005862;muscle thin filament tropomyosin;0.0315690457613067!GO:0048468;cell development;0.0315925162770885!GO:0007346;regulation of progression through mitotic cell cycle;0.032219185983997!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0324239352676225!GO:0000287;magnesium ion binding;0.0326435466926556!GO:0050178;phenylpyruvate tautomerase activity;0.0327519167018768!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.032766416031828!GO:0032507;maintenance of cellular protein localization;0.0328759670667187!GO:0000059;protein import into nucleus, docking;0.0329546902724385!GO:0051336;regulation of hydrolase activity;0.0329925695449547!GO:0008186;RNA-dependent ATPase activity;0.0333676932795195!GO:0051235;maintenance of localization;0.0333676932795195!GO:0006007;glucose catabolic process;0.0343550936981908!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0347631160693745!GO:0010257;NADH dehydrogenase complex assembly;0.0347631160693745!GO:0033108;mitochondrial respiratory chain complex assembly;0.0347631160693745!GO:0022408;negative regulation of cell-cell adhesion;0.0348429845331127!GO:0006919;caspase activation;0.0349908341719327!GO:0000096;sulfur amino acid metabolic process;0.0364854329748995!GO:0031901;early endosome membrane;0.0364854329748995!GO:0008033;tRNA processing;0.0371415231416798!GO:0006520;amino acid metabolic process;0.0371511616718692!GO:0030695;GTPase regulator activity;0.03716433593028!GO:0016363;nuclear matrix;0.0372283675587454!GO:0007021;tubulin folding;0.0377497655061487!GO:0031301;integral to organelle membrane;0.0377497655061487!GO:0031663;lipopolysaccharide-mediated signaling pathway;0.0380394777387569!GO:0006268;DNA unwinding during replication;0.0383324325752738!GO:0051085;chaperone cofactor-dependent protein folding;0.0386772352279225!GO:0045941;positive regulation of transcription;0.0392077987566687!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0392847347514031!GO:0006643;membrane lipid metabolic process;0.0395240491099287!GO:0006644;phospholipid metabolic process;0.0398982179009278!GO:0018193;peptidyl-amino acid modification;0.0399751182928705!GO:0051540;metal cluster binding;0.040193686019612!GO:0051536;iron-sulfur cluster binding;0.040193686019612!GO:0009308;amine metabolic process;0.0403793834312429!GO:0003779;actin binding;0.0404186741269773!GO:0005092;GDP-dissociation inhibitor activity;0.0407650628877812!GO:0044433;cytoplasmic vesicle part;0.0410108150916273!GO:0031529;ruffle organization and biogenesis;0.0413784137300673!GO:0045334;clathrin-coated endocytic vesicle;0.0413784137300673!GO:0006497;protein amino acid lipidation;0.0415112769056059!GO:0048659;smooth muscle cell proliferation;0.0419280302085242!GO:0008286;insulin receptor signaling pathway;0.0419965264873386!GO:0006401;RNA catabolic process;0.0423156779657828!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0432513225410112!GO:0030119;AP-type membrane coat adaptor complex;0.0432513225410112!GO:0005652;nuclear lamina;0.0433199000443436!GO:0030433;ER-associated protein catabolic process;0.0434693545594965!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0434693545594965!GO:0000209;protein polyubiquitination;0.0439362533335077!GO:0005869;dynactin complex;0.0440421361998078!GO:0035258;steroid hormone receptor binding;0.0440421361998078!GO:0000075;cell cycle checkpoint;0.0446876928608259!GO:0019206;nucleoside kinase activity;0.0447309554250371!GO:0032508;DNA duplex unwinding;0.0447879525242624!GO:0032392;DNA geometric change;0.0447879525242624!GO:0016860;intramolecular oxidoreductase activity;0.0449109629034634!GO:0006261;DNA-dependent DNA replication;0.0453160106606222!GO:0008283;cell proliferation;0.0458157332559647!GO:0030913;paranodal junction assembly;0.045978773533549!GO:0032288;myelin formation;0.045978773533549!GO:0051028;mRNA transport;0.0463007588857564!GO:0006767;water-soluble vitamin metabolic process;0.0463007588857564!GO:0030127;COPII vesicle coat;0.0477331619017457!GO:0012507;ER to Golgi transport vesicle membrane;0.0477331619017457!GO:0051101;regulation of DNA binding;0.0485292912068752!GO:0044438;microbody part;0.0486995986745512!GO:0044439;peroxisomal part;0.0486995986745512!GO:0045185;maintenance of protein localization;0.0488320914863612!GO:0006012;galactose metabolic process;0.0493043780082417!GO:0008629;induction of apoptosis by intracellular signals;0.0497473355150661!GO:0046979;TAP2 binding;0.0497473355150661!GO:0046977;TAP binding;0.0497473355150661!GO:0046978;TAP1 binding;0.0497473355150661!GO:0016481;negative regulation of transcription;0.0498803175254405 | |||
|sample_id=11514 | |sample_id=11514 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 105: | ||
|sample_tissue=kidney | |sample_tissue=kidney | ||
|top_motifs=RXR{A,B,G}:1.76848416628;SOX{8,9,10}:1.68348352819;ZNF423:1.49257809688;ESRRA:1.44827298935;TFAP2{A,C}:1.33525819773;TLX1..3_NFIC{dimer}:1.31816353692;NR5A1,2:1.29852041472;TFAP4:1.17453389722;XCPE1{core}:1.14598914802;HES1:1.08329425393;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.0629287884;RXRA_VDR{dimer}:1.01427191007;ZNF148:0.9802079665;EBF1:0.979408884077;AR:0.914536514686;PAX1,9:0.829738077958;ZNF238:0.798794381463;TP53:0.794947133003;FOXL1:0.793432622689;LEF1_TCF7_TCF7L1,2:0.778458225258;FOX{I1,J2}:0.777961937757;ZBTB6:0.769993296908;HIC1:0.744260751132;GTF2A1,2:0.733206745964;PAX6:0.710982600395;REST:0.699504571017;PPARG:0.690526833031;GATA6:0.687607923283;HAND1,2:0.67876654725;ARID5B:0.651013556991;IKZF1:0.643031779873;GZF1:0.638504177365;ETS1,2:0.599594612501;POU6F1:0.586355296222;SOX5:0.580842334066;SMAD1..7,9:0.576519148335;TFAP2B:0.556302124075;ZIC1..3:0.553879351712;NFATC1..3:0.534629308584;MYOD1:0.526826715133;IKZF2:0.517957158005;TAL1_TCF{3,4,12}:0.51216736237;LMO2:0.495038857143;FOXQ1:0.481839943787;PBX1:0.434613274971;TFCP2:0.430129194128;SOX2:0.429455816663;HNF4A_NR2F1,2:0.394790544069;SP1:0.392709797657;bHLH_family:0.338887535252;STAT2,4,6:0.306225395634;CRX:0.28710621516;GCM1,2:0.277519733127;GFI1B:0.275907735083;PAX5:0.265065272496;HOX{A5,B5}:0.251404520126;FOSL2:0.236142821975;PAX8:0.234106589352;TBP:0.233509035347;RORA:0.22994957183;SPIB:0.221608195528;TEAD1:0.214199838147;SPZ1:0.213700706351;NANOG:0.199927616631;NFE2:0.179498968291;LHX3,4:0.167264927202;GFI1:0.166225055524;POU2F1..3:0.129542915929;NFY{A,B,C}:0.125324948247;ESR1:0.119343688621;ADNP_IRX_SIX_ZHX:0.0728564854001;UFEwm:0.0705838188881;HBP1_HMGB_SSRP1_UBTF:0.0561004285876;HOX{A6,A7,B6,B7}:0.0279297960737;FOXM1:0.016340143989;NFKB1_REL_RELA:0.00456072729798;POU1F1:0.00386843506326;ONECUT1,2:-0.00238604428519;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.00581835419813;NR1H4:-0.00832431495515;MED-1{core}:-0.00857097834255;BACH2:-0.00981408167878;HMX1:-0.0113306075334;EP300:-0.021015476965;NFE2L1:-0.0234238418867;NKX2-3_NKX2-5:-0.0279472534509;NKX2-2,8:-0.0313879187514;HNF1A:-0.0351757730082;SPI1:-0.0544630638939;MTE{core}:-0.0586695405224;MYB:-0.0671344170231;ZFP161:-0.0696795694874;ALX1:-0.0754870829419;MEF2{A,B,C,D}:-0.0922253338245;SOX17:-0.0973436693595;FOS_FOS{B,L1}_JUN{B,D}:-0.123895275012;STAT5{A,B}:-0.130227383524;RREB1:-0.151965231882;NR6A1:-0.166387538953;GTF2I:-0.169060974782;MTF1:-0.182480550605;TFDP1:-0.19713387731;NFE2L2:-0.205961988681;NR3C1:-0.225017027621;SRF:-0.238470426092;E2F1..5:-0.242432509766;FOX{D1,D2}:-0.258278080662;SNAI1..3:-0.262408271419;KLF4:-0.28435251107;SREBF1,2:-0.292525910052;VSX1,2:-0.29710352096;FOXA2:-0.300186075422;GLI1..3:-0.323725330424;ATF6:-0.339023388152;PATZ1:-0.368645376599;FOX{F1,F2,J1}:-0.369617258139;CUX2:-0.386215197172;HLF:-0.400594496605;ELF1,2,4:-0.40190254212;MAZ:-0.408263379288;EGR1..3:-0.414599990749;ZNF143:-0.415372068057;XBP1:-0.415512710748;RFX1:-0.427144614383;NANOG{mouse}:-0.444477032293;IRF1,2:-0.456817722835;PITX1..3:-0.457662065096;FOXP3:-0.466227583077;CEBPA,B_DDIT3:-0.490308616953;RUNX1..3:-0.493964358655;ZEB1:-0.494309590879;NHLH1,2:-0.501585295786;PAX2:-0.508963438364;OCT4_SOX2{dimer}:-0.523705661717;RBPJ:-0.527950746977;PRRX1,2:-0.529550822009;JUN:-0.554107332224;TEF:-0.579295702448;POU3F1..4:-0.584488601968;MZF1:-0.604911098528;PAX3,7:-0.622474024459;MYBL2:-0.659631011045;NFIX:-0.666405788327;DMAP1_NCOR{1,2}_SMARC:-0.673895165486;YY1:-0.721546462444;POU5F1:-0.746683740399;TOPORS:-0.760680902889;TGIF1:-0.780235305553;NKX3-2:-0.783138415899;HOXA9_MEIS1:-0.789046867228;MYFfamily:-0.815067443117;T:-0.839404917814;FOXO1,3,4:-0.852692062115;NFIL3:-0.874019152629;ALX4:-0.918063427358;GATA4:-0.918564943589;CDC5L:-0.922791049419;NRF1:-0.942344441915;IRF7:-0.95809318614;EN1,2:-0.959760269765;DBP:-0.990738677786;PRDM1:-1.02918179679;BPTF:-1.03330410378;STAT1,3:-1.05768246375;TBX4,5:-1.05896128092;ATF2:-1.07257602877;ATF4:-1.12069198152;BREu{core}:-1.14738537712;FOXP1:-1.15312405787;MAFB:-1.16309919871;CREB1:-1.18698948649;HIF1A:-1.23909705365;HOX{A4,D4}:-1.25795883366;ATF5_CREB3:-1.31777386387;AHR_ARNT_ARNT2:-1.34298473709;NKX3-1:-1.34424258461;FOXD3:-1.34961857379;TLX2:-1.39505986072;CDX1,2,4:-1.44858199033;HSF1,2:-1.46709801831;NKX6-1,2:-1.53754371926;PDX1:-1.54092840359;PAX4:-1.55573639099;AIRE:-1.55828860885;ZNF384:-1.56325724756;EVI1:-1.58902095067;HMGA1,2:-1.61910289023;ZBTB16:-1.67729653539;RFX2..5_RFXANK_RFXAP:-1.88230365082;FOXN1:-1.88489856735;NKX2-1,4:-1.95279492184;ELK1,4_GABP{A,B1}:-1.97565352876 | |top_motifs=RXR{A,B,G}:1.76848416628;SOX{8,9,10}:1.68348352819;ZNF423:1.49257809688;ESRRA:1.44827298935;TFAP2{A,C}:1.33525819773;TLX1..3_NFIC{dimer}:1.31816353692;NR5A1,2:1.29852041472;TFAP4:1.17453389722;XCPE1{core}:1.14598914802;HES1:1.08329425393;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.0629287884;RXRA_VDR{dimer}:1.01427191007;ZNF148:0.9802079665;EBF1:0.979408884077;AR:0.914536514686;PAX1,9:0.829738077958;ZNF238:0.798794381463;TP53:0.794947133003;FOXL1:0.793432622689;LEF1_TCF7_TCF7L1,2:0.778458225258;FOX{I1,J2}:0.777961937757;ZBTB6:0.769993296908;HIC1:0.744260751132;GTF2A1,2:0.733206745964;PAX6:0.710982600395;REST:0.699504571017;PPARG:0.690526833031;GATA6:0.687607923283;HAND1,2:0.67876654725;ARID5B:0.651013556991;IKZF1:0.643031779873;GZF1:0.638504177365;ETS1,2:0.599594612501;POU6F1:0.586355296222;SOX5:0.580842334066;SMAD1..7,9:0.576519148335;TFAP2B:0.556302124075;ZIC1..3:0.553879351712;NFATC1..3:0.534629308584;MYOD1:0.526826715133;IKZF2:0.517957158005;TAL1_TCF{3,4,12}:0.51216736237;LMO2:0.495038857143;FOXQ1:0.481839943787;PBX1:0.434613274971;TFCP2:0.430129194128;SOX2:0.429455816663;HNF4A_NR2F1,2:0.394790544069;SP1:0.392709797657;bHLH_family:0.338887535252;STAT2,4,6:0.306225395634;CRX:0.28710621516;GCM1,2:0.277519733127;GFI1B:0.275907735083;PAX5:0.265065272496;HOX{A5,B5}:0.251404520126;FOSL2:0.236142821975;PAX8:0.234106589352;TBP:0.233509035347;RORA:0.22994957183;SPIB:0.221608195528;TEAD1:0.214199838147;SPZ1:0.213700706351;NANOG:0.199927616631;NFE2:0.179498968291;LHX3,4:0.167264927202;GFI1:0.166225055524;POU2F1..3:0.129542915929;NFY{A,B,C}:0.125324948247;ESR1:0.119343688621;ADNP_IRX_SIX_ZHX:0.0728564854001;UFEwm:0.0705838188881;HBP1_HMGB_SSRP1_UBTF:0.0561004285876;HOX{A6,A7,B6,B7}:0.0279297960737;FOXM1:0.016340143989;NFKB1_REL_RELA:0.00456072729798;POU1F1:0.00386843506326;ONECUT1,2:-0.00238604428519;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.00581835419813;NR1H4:-0.00832431495515;MED-1{core}:-0.00857097834255;BACH2:-0.00981408167878;HMX1:-0.0113306075334;EP300:-0.021015476965;NFE2L1:-0.0234238418867;NKX2-3_NKX2-5:-0.0279472534509;NKX2-2,8:-0.0313879187514;HNF1A:-0.0351757730082;SPI1:-0.0544630638939;MTE{core}:-0.0586695405224;MYB:-0.0671344170231;ZFP161:-0.0696795694874;ALX1:-0.0754870829419;MEF2{A,B,C,D}:-0.0922253338245;SOX17:-0.0973436693595;FOS_FOS{B,L1}_JUN{B,D}:-0.123895275012;STAT5{A,B}:-0.130227383524;RREB1:-0.151965231882;NR6A1:-0.166387538953;GTF2I:-0.169060974782;MTF1:-0.182480550605;TFDP1:-0.19713387731;NFE2L2:-0.205961988681;NR3C1:-0.225017027621;SRF:-0.238470426092;E2F1..5:-0.242432509766;FOX{D1,D2}:-0.258278080662;SNAI1..3:-0.262408271419;KLF4:-0.28435251107;SREBF1,2:-0.292525910052;VSX1,2:-0.29710352096;FOXA2:-0.300186075422;GLI1..3:-0.323725330424;ATF6:-0.339023388152;PATZ1:-0.368645376599;FOX{F1,F2,J1}:-0.369617258139;CUX2:-0.386215197172;HLF:-0.400594496605;ELF1,2,4:-0.40190254212;MAZ:-0.408263379288;EGR1..3:-0.414599990749;ZNF143:-0.415372068057;XBP1:-0.415512710748;RFX1:-0.427144614383;NANOG{mouse}:-0.444477032293;IRF1,2:-0.456817722835;PITX1..3:-0.457662065096;FOXP3:-0.466227583077;CEBPA,B_DDIT3:-0.490308616953;RUNX1..3:-0.493964358655;ZEB1:-0.494309590879;NHLH1,2:-0.501585295786;PAX2:-0.508963438364;OCT4_SOX2{dimer}:-0.523705661717;RBPJ:-0.527950746977;PRRX1,2:-0.529550822009;JUN:-0.554107332224;TEF:-0.579295702448;POU3F1..4:-0.584488601968;MZF1:-0.604911098528;PAX3,7:-0.622474024459;MYBL2:-0.659631011045;NFIX:-0.666405788327;DMAP1_NCOR{1,2}_SMARC:-0.673895165486;YY1:-0.721546462444;POU5F1:-0.746683740399;TOPORS:-0.760680902889;TGIF1:-0.780235305553;NKX3-2:-0.783138415899;HOXA9_MEIS1:-0.789046867228;MYFfamily:-0.815067443117;T:-0.839404917814;FOXO1,3,4:-0.852692062115;NFIL3:-0.874019152629;ALX4:-0.918063427358;GATA4:-0.918564943589;CDC5L:-0.922791049419;NRF1:-0.942344441915;IRF7:-0.95809318614;EN1,2:-0.959760269765;DBP:-0.990738677786;PRDM1:-1.02918179679;BPTF:-1.03330410378;STAT1,3:-1.05768246375;TBX4,5:-1.05896128092;ATF2:-1.07257602877;ATF4:-1.12069198152;BREu{core}:-1.14738537712;FOXP1:-1.15312405787;MAFB:-1.16309919871;CREB1:-1.18698948649;HIF1A:-1.23909705365;HOX{A4,D4}:-1.25795883366;ATF5_CREB3:-1.31777386387;AHR_ARNT_ARNT2:-1.34298473709;NKX3-1:-1.34424258461;FOXD3:-1.34961857379;TLX2:-1.39505986072;CDX1,2,4:-1.44858199033;HSF1,2:-1.46709801831;NKX6-1,2:-1.53754371926;PDX1:-1.54092840359;PAX4:-1.55573639099;AIRE:-1.55828860885;ZNF384:-1.56325724756;EVI1:-1.58902095067;HMGA1,2:-1.61910289023;ZBTB16:-1.67729653539;RFX2..5_RFXANK_RFXAP:-1.88230365082;FOXN1:-1.88489856735;NKX2-1,4:-1.95279492184;ELK1,4_GABP{A,B1}:-1.97565352876 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11514-119H2;search_select_hide=table117:FF:11514-119H2 | |||
}} | }} | ||
Latest revision as of 18:05, 4 June 2020
| Name: | Renal Glomerular Endothelial Cells, donor1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12074 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
|
| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12074
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12074
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.548 |
| 10 | 10 | 0.684 |
| 100 | 100 | 0.728 |
| 101 | 101 | 0.342 |
| 102 | 102 | 0.546 |
| 103 | 103 | 0.778 |
| 104 | 104 | 0.393 |
| 105 | 105 | 0.207 |
| 106 | 106 | 0.0382 |
| 107 | 107 | 0.0542 |
| 108 | 108 | 0.446 |
| 109 | 109 | 0.147 |
| 11 | 11 | 0.0357 |
| 110 | 110 | 0.0975 |
| 111 | 111 | 0.592 |
| 112 | 112 | 0.359 |
| 113 | 113 | 0.743 |
| 114 | 114 | 0.395 |
| 115 | 115 | 0.922 |
| 116 | 116 | 0.711 |
| 117 | 117 | 0.826 |
| 118 | 118 | 0.866 |
| 119 | 119 | 0.139 |
| 12 | 12 | 0.501 |
| 120 | 120 | 0.428 |
| 121 | 121 | 0.947 |
| 122 | 122 | 0.74 |
| 123 | 123 | 0.224 |
| 124 | 124 | 0.591 |
| 125 | 125 | 0.562 |
| 126 | 126 | 0.572 |
| 127 | 127 | 0.96 |
| 128 | 128 | 0.157 |
| 129 | 129 | 0.0128 |
| 13 | 13 | 0.467 |
| 130 | 130 | 0.705 |
| 131 | 131 | 0.0511 |
| 132 | 132 | 0.14 |
| 133 | 133 | 0.205 |
| 134 | 134 | 0.82 |
| 135 | 135 | 0.128 |
| 136 | 136 | 0.84 |
| 137 | 137 | 0.515 |
| 138 | 138 | 0.713 |
| 139 | 139 | 0.243 |
| 14 | 14 | 0.817 |
| 140 | 140 | 0.711 |
| 141 | 141 | 0.139 |
| 142 | 142 | 0.535 |
| 143 | 143 | 0.00404 |
| 144 | 144 | 0.332 |
| 145 | 145 | 0.161 |
| 146 | 146 | 0.101 |
| 147 | 147 | 0.304 |
| 148 | 148 | 0.691 |
| 149 | 149 | 0.0184 |
| 15 | 15 | 0.34 |
| 150 | 150 | 0.23 |
| 151 | 151 | 0.446 |
| 152 | 152 | 0.0264 |
| 153 | 153 | 0.259 |
| 154 | 154 | 0.383 |
| 155 | 155 | 0.633 |
| 156 | 156 | 0.116 |
| 157 | 157 | 0.555 |
| 158 | 158 | 0.698 |
| 159 | 159 | 0.805 |
| 16 | 16 | 0.57 |
| 160 | 160 | 0.00247 |
| 161 | 161 | 0.751 |
| 162 | 162 | 0.465 |
| 163 | 163 | 0.825 |
| 164 | 164 | 0.887 |
| 165 | 165 | 0.286 |
| 166 | 166 | 0.245 |
| 167 | 167 | 0.165 |
| 168 | 168 | 0.419 |
| 169 | 169 | 0.031 |
| 17 | 17 | 0.122 |
| 18 | 18 | 0.318 |
| 19 | 19 | 0.072 |
| 2 | 2 | 0.22 |
| 20 | 20 | 0.718 |
| 21 | 21 | 0.858 |
| 22 | 22 | 0.0818 |
| 23 | 23 | 0.0494 |
| 24 | 24 | 0.749 |
| 25 | 25 | 0.745 |
| 26 | 26 | 0.0868 |
| 27 | 27 | 0.146 |
| 28 | 28 | 0.416 |
| 29 | 29 | 0.852 |
| 3 | 3 | 0.519 |
| 30 | 30 | 0.449 |
| 31 | 31 | 0.434 |
| 32 | 32 | 0.196 |
| 33 | 33 | 0.327 |
| 34 | 34 | 0.0839 |
| 35 | 35 | 0.686 |
| 36 | 36 | 0.161 |
| 37 | 37 | 0.234 |
| 38 | 38 | 0.172 |
| 39 | 39 | 0.231 |
| 4 | 4 | 0.168 |
| 40 | 40 | 0.00775 |
| 41 | 41 | 0.0744 |
| 42 | 42 | 0.807 |
| 43 | 43 | 0.292 |
| 44 | 44 | 0.26 |
| 45 | 45 | 0.169 |
| 46 | 46 | 0.0796 |
| 47 | 47 | 0.449 |
| 48 | 48 | 0.091 |
| 49 | 49 | 0.366 |
| 5 | 5 | 0.633 |
| 50 | 50 | 0.559 |
| 51 | 51 | 0.292 |
| 52 | 52 | 0.503 |
| 53 | 53 | 0.955 |
| 54 | 54 | 0.489 |
| 55 | 55 | 0.981 |
| 56 | 56 | 0.503 |
| 57 | 57 | 0.421 |
| 58 | 58 | 0.821 |
| 59 | 59 | 0.0118 |
| 6 | 6 | 0.206 |
| 60 | 60 | 0.205 |
| 61 | 61 | 0.973 |
| 62 | 62 | 0.804 |
| 63 | 63 | 0.329 |
| 64 | 64 | 0.0875 |
| 65 | 65 | 0.0186 |
| 66 | 66 | 0.585 |
| 67 | 67 | 0.805 |
| 68 | 68 | 0.0562 |
| 69 | 69 | 0.142 |
| 7 | 7 | 0.643 |
| 70 | 70 | 0.145 |
| 71 | 71 | 0.392 |
| 72 | 72 | 0.637 |
| 73 | 73 | 0.0204 |
| 74 | 74 | 0.858 |
| 75 | 75 | 0.337 |
| 76 | 76 | 0.355 |
| 77 | 77 | 0.0365 |
| 78 | 78 | 0.729 |
| 79 | 79 | 0.00733 |
| 8 | 8 | 0.0277 |
| 80 | 80 | 0.805 |
| 81 | 81 | 0.9 |
| 82 | 82 | 0.269 |
| 83 | 83 | 0.822 |
| 84 | 84 | 0.131 |
| 85 | 85 | 0.0782 |
| 86 | 86 | 0.788 |
| 87 | 87 | 0.415 |
| 88 | 88 | 0.653 |
| 89 | 89 | 0.417 |
| 9 | 9 | 0.262 |
| 90 | 90 | 0.665 |
| 91 | 91 | 0.0638 |
| 92 | 92 | 0.385 |
| 93 | 93 | 0.719 |
| 94 | 94 | 0.455 |
| 95 | 95 | 0.0785 |
| 96 | 96 | 0.513 |
| 97 | 97 | 0.633 |
| 98 | 98 | 0.0664 |
| 99 | 99 | 0.0476 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12074
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000153 human renal glomerular endothelial cell sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000213 (lining cell)
0002078 (meso-epithelial cell)
0000215 (barrier cell)
0000255 (eukaryotic cell)
0000115 (endothelial cell)
0000666 (fenestrated cell)
1000746 (glomerular cell)
1000497 (kidney cell)
0002518 (kidney epithelial cell)
0002681 (kidney cortical cell)
1000449 (epithelial cell of nephron)
0002584 (renal cortical epithelial cell)
1000612 (kidney corpuscule cell)
0002188 (glomerular endothelial cell)
UBERON: Anatomy
0000468 (multi-cellular organism)
0002113 (kidney)
0002100 (trunk)
0000483 (epithelium)
0001851 (cortex)
0000479 (tissue)
0000064 (organ part)
0000062 (organ)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0006555 (excretory tube)
0006554 (urinary system structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0003914 (epithelial tube)
0000025 (tube)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0003103 (compound organ)
0009569 (subdivision of trunk)
0000489 (cavitated compound organ)
0000353 (parenchyma)
0005177 (trunk region element)
0005172 (abdomen element)
0010317 (germ layer / neural crest derived structure)
0004819 (kidney epithelium)
0005173 (abdominal segment element)
0001285 (nephron)
0000074 (renal glomerulus)
0001225 (cortex of kidney)
0001229 (renal corpuscle)
0011143 (upper urinary tract)
0001008 (renal system)
0002417 (abdominal segment of trunk)
0008987 (renal parenchyma)
0007684 (uriniferous tubule)
0000916 (abdomen)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000153 (human renal glomerular endothelial cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000222 (mesodermal cell)
