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FFCP PHASE1:Mm9::chr12:47919969..47919991,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=664883
|EntrezGene=664883
|HGNC=
|HGNC=
|MCL_coexpression_id=87
|TSSclassifier=NA
|UniProt=Q9JKN6
|UniProt=Q9JKN6
|association_with_transcript=-207bp_to_ENSMUST00000021438,NM_021361,uc007nmd.2,uc007nme.2_5end
|association_with_transcript=-207bp_to_ENSMUST00000021438,NM_021361,uc007nmd.2,uc007nme.2_5end
|cluster_id=chr12:47919969..47919991,-
|description=CAGE_peak_2_at_Nova1_5end
|description=CAGE_peak_2_at_Nova1_5end
|id=chr12:47919969..47919991,-
|id=chr12:47919969..47919991,-
|ontology_enrichment_celltype=CL:0000117!1.76e-13!23;CL:0000337!1.76e-13!23;CL:0000540!3.13e-13!33;CL:0000047!3.13e-13!33;CL:0000031!3.13e-13!33;CL:0000404!3.13e-13!33;CL:0002319!1.10e-12!43;CL:0000221!1.49e-12!44;CL:0000133!1.49e-12!44;CL:0000393!7.85e-09!39;CL:0000211!7.85e-09!39;CL:0000055!1.98e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,5.01e-17,23;CL:0000337,5.01e-17,23;CL:0000540,8.55e-15,33;CL:0000047,8.55e-15,33;CL:0000031,8.55e-15,33;CL:0000404,8.55e-15,33;CL:0002319,1.44e-12,43;CL:0000221,5.24e-12,44;CL:0000133,5.24e-12,44;CL:0000393,8.13e-11,39;CL:0000211,8.13e-11,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.53e-29!102;UBERON:0000924!1.53e-29!102;UBERON:0006601!1.53e-29!102;UBERON:0001017!1.70e-27!73;UBERON:0005743!1.70e-27!73;UBERON:0000073!3.97e-27!75;UBERON:0001016!3.97e-27!75;UBERON:0002346!1.30e-22!71;UBERON:0003075!1.30e-22!71;UBERON:0007284!1.30e-22!71;UBERON:0000033!4.03e-22!63;UBERON:0001049!2.94e-21!52;UBERON:0005068!2.94e-21!52;UBERON:0006241!2.94e-21!52;UBERON:0007135!2.94e-21!52;UBERON:0000955!1.82e-19!50;UBERON:0006238!1.82e-19!50;UBERON:0002616!6.67e-19!49;UBERON:0003056!2.67e-18!49;UBERON:0002020!9.98e-17!34;UBERON:0003080!2.44e-15!40;UBERON:0002780!1.14e-14!39;UBERON:0001890!1.14e-14!39;UBERON:0006240!1.14e-14!39;UBERON:0002791!3.08e-13!29;UBERON:0003528!3.08e-13!29;UBERON:0001893!3.08e-13!29;UBERON:0000153!1.19e-08!94;UBERON:0007811!1.20e-08!86;UBERON:0000468!1.73e-08!333;UBERON:0000956!2.29e-08!21;UBERON:0001869!2.29e-08!21;UBERON:0000203!2.29e-08!21;UBERON:0002619!1.20e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.01e-30,95;UBERON:0000924,1.01e-30,95;UBERON:0006601,1.01e-30,95;UBERON:0001017,1.24e-29,73;UBERON:0002346,2.83e-28,64;UBERON:0003075,2.83e-28,64;UBERON:0007284,2.83e-28,64;UBERON:0001016,3.52e-28,75;UBERON:0010371,3.48e-26,73;UBERON:0000073,8.51e-26,54;UBERON:0001049,3.45e-24,52;UBERON:0005068,3.45e-24,52;UBERON:0006241,3.45e-24,52;UBERON:0007135,3.45e-24,52;UBERON:0002020,2.24e-20,34;UBERON:0003056,3.64e-20,49;UBERON:0000955,1.49e-19,47;UBERON:0006238,1.49e-19,47;UBERON:0002616,7.27e-19,46;UBERON:0003080,2.28e-16,40;UBERON:0003528,6.79e-16,29;UBERON:0002791,6.79e-16,29;UBERON:0001893,6.79e-16,29;UBERON:0002780,1.53e-15,39;UBERON:0001890,1.53e-15,39;UBERON:0006240,1.53e-15,39;UBERON:0010314,2.48e-14,92;UBERON:0000956,1.14e-09,21;UBERON:0001869,1.14e-09,21;UBERON:0000203,1.14e-09,21;UBERON:0002619,1.05e-08,17;UBERON:0003076,1.31e-08,12;UBERON:0003057,1.31e-08,12;UBERON:0002420,6.94e-08,8;UBERON:0007245,6.94e-08,8;UBERON:0010009,6.94e-08,8;UBERON:0010011,6.94e-08,8;UBERON:0000454,6.94e-08,8;UBERON:0002021,2.41e-07,10;UBERON:0000411,2.41e-07,10;UBERON:0001950,2.41e-07,10;UBERON:0002240,8.43e-07,6;UBERON:0005174,8.43e-07,6;UBERON:0001137,8.43e-07,6
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,1.09012578190223,0.878744730937887,1.55543919259427,0.699932108126813,1.43752564364972,0,0,0,0,0,0,25.0872411465901,31.739458756322,32.9592329823213,0,0,0,0,0,2.39680088414724,2.68952813725088,1.34796496001021,1.35005938331691,1.26194976810829,17.7103610330358,16.1234034894678,3.55223317723367,5.271500906003,1.83843757322004,9.91042928994498,11.2364857514965,15.6678663921368,27.1685752724199,29.916459457988,25.5247551572812,12.2840519560608,10.1297269805702,11.3070703354839,25.9273155216828,28.6167078406197,30.7559085611746,0.605809546665472,0.453429360640713,0,0,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0,0,0.505524445014783,0.45673551887624,0,0.445326417194474,0.173485326766136,0.304465478312141,0.691846491768175,0.753613202763113,0.940709657085638,0,0,2.4581890676385,0.884610551949874,0.647067399789637,0.883366073841574,0.484875253135222,0,14.3462590535658,10.0534419270458,0,0,0,0,22.3188052713186,11.8950156732843,5.27748278874031,8.16974304903699,6.39288643325826,15.9996794310861,9.24775199486219,1.01839363850316,0.248813941220186,0.252722758433675,1.47309299120532,1.56144531555244,2.29902104433473,5.58192602396583,4.37043971723574,4.42237244483631,3.97152532883034,3.37326208415024,2.06962696591213,0.431135985865684,0.378212160335639,0.527853372491847,1.7535658594206,0.834141747676794,1.0447564995665,1.4404749548556,0,0,0,0,1.24275463521301,0,0.180062061461015,0.710234206755631,0,0.462801338662135,0.232533944750408,0,0,0,0.492502392237286,0.324275238183423,0,0.878200461164203,0.268412837520744,5.88811855979556,3.19004298375782,0.330418782983798,0,0.213288250535234,0.464473343720877,0.644337306610467,0.403367049246685,0,0.190225626112559,0.474529061544512,0.164698954724011,0,0.596869416123452,0.19496408711912,0,0,0,0.948339504765408,0.571242563048644,1.1270773567308,0.814605311381257,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.169745085775188,0,0.167506257441816,0.476087281772027,0,0.315270288212382,0.44292937929755,0.318909537314974,0.655453258862952,0,0.433947175744535,0,0,0.491764273019036,1.93155722413313,17.8211154886449,14.6514608240254,0,3.28212205365685,0.315508219416257,1.95219372148319,3.01592756825919,2.38968797952552,2.67358408898873,0.849229592366497,3.23848561339915,1.16902343164525,0.395287777946524,6.10510501201433,1.27746076687442,0.890328018336276,1.62886959353576,0.989820737835213,1.32745138339963,0.485561272309963,0,0.377210159511796,0.590603785761546,1.53717573971964,0.775284879504663,0.727067458955011,0.712994756769443,0.316036757935816,1.05418608574999,1.03135543248187,1.02131881726136,1.98067203434441,0.905510786479282,1.28602221018955,1.24138163549592,0.891844088010353,1.31639216481697,0.913394847343798,0.23467170806371,0,0.220528398054962,6.10079135883476,2.42196640043858,0.965006798850494,1.19372344003136,0.656563598980245,0,20.9530591271876,0,0.619160603889667,0.370389054739423,0,0.27338845544205,0,0,0,0,0,0.949007980743406,0.813277868507395,0.108005340821801,0.209088296014469,0.218362563746178,0.539457385539283,0.495920734352016,0,0.90730481304255,0.621339313086926,0,0.598066184175915,0.330916980914195,0.583353565032143,0.516639293910924,0.337912250981556,0.234714477291508,0.13020438484395,0.524296722128554,0.241584120826006,0.288030006257865,0,0,0.308132871494482,0,0,0,0.120195449519969,0,0,0,0,0,0,0,1.36038230169127,0,0.179427713218951,0,0.19318959403219,0.750729901804728,2.74727436400898,1.50057865355346,1.00314420807073,6.7770221114048,5.9842280745933,6.30185064783336,6.70227411140382,4.7955776383945,9.06472676867641,3.37511250115903,7.65546045481175,4.07828168085784,3.10656187051092,3.84013186061454,6.78342284781753,3.92687293234509,5.34834777550247,5.03071590307158,3.8607136774503,6.22290837844523,5.35691148821125,3.53011130550997,3.28506375292937,4.56262739802432,5.47016390019621,3.46473577638565,4.86591158277006,3.33125719942557,1.90517476513229,3.70829843023538,1.54327376370964,3.70877310722976,2.64958056241915,3.77156177623957,2.30718548007139,1.90748951957857,4.50573891560218,5.17601592284318,3.46919892355874,4.024415403201,2.89376682581627,2.30866993537965,4.48913817326191,2.49133538060766,1.97008964751127,2.86461730218783,2.94379998253335,2.89359916471712,4.99621155875892,2.33931608445408,3.00819475667618,2.29545998482612,2.20591419119516,1.62307484934295
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,1.09012578190223,0.878744730937887,1.55543919259427,0.699932108126813,1.43752564364972,0,0,0,0,0,0,25.0872411465901,31.739458756322,32.9592329823213,0,0,0,0,0,2.39680088414724,2.68952813725088,1.34796496001021,1.35005938331691,1.26194976810829,17.7103610330358,16.1234034894678,3.55223317723367,5.271500906003,1.83843757322004,9.91042928994498,11.2364857514965,15.6678663921368,27.1685752724199,29.916459457988,25.5247551572812,12.2840519560608,10.1297269805702,11.3070703354839,25.9273155216828,28.6167078406197,30.7559085611746,0.605809546665472,0.453429360640713,0,0,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0,0,0.505524445014783,0.45673551887624,0,0.445326417194474,0.173485326766136,0.304465478312141,0.691846491768175,0.753613202763113,0.940709657085638,0,0,2.4581890676385,0.884610551949874,0.647067399789637,0.883366073841574,0.484875253135222,0,14.3462590535658,10.0534419270458,0,0,0,0,22.3188052713186,11.8950156732843,5.27748278874031,8.16974304903699,6.39288643325826,15.9996794310861,9.24775199486219,1.01839363850316,0.248813941220186,0.252722758433675,1.47309299120532,1.56144531555244,2.29902104433473,5.58192602396583,4.37043971723574,4.42237244483631,3.97152532883034,3.37326208415024,2.06962696591213,0.431135985865684,0.378212160335639,0.527853372491847,1.7535658594206,0.834141747676794,1.0447564995665,1.4404749548556,0,0,0,0,1.24275463521301,0,0.180062061461015,0.710234206755631,0,0.462801338662135,0.232533944750408,0,0,0,0.492502392237286,0.324275238183423,0,0.878200461164203,0.268412837520744,5.88811855979556,3.19004298375782,0.330418782983798,0,0.213288250535234,0.464473343720877,0.644337306610467,0.403367049246685,0,0.190225626112559,0.474529061544512,0.164698954724011,0,0.596869416123452,0.19496408711912,0,0,0,0.948339504765408,0.571242563048644,1.1270773567308,0.814605311381257,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.169745085775188,0,0.167506257441816,0.476087281772027,0,0.315270288212382,0.44292937929755,0.318909537314974,0.655453258862952,0,0.433947175744535,0,0,0.491764273019036,1.93155722413313,17.8211154886449,14.6514608240254,0,3.28212205365685,0.315508219416257,1.95219372148319,3.01592756825919,2.38968797952552,2.67358408898873,0.849229592366497,3.23848561339915,1.16902343164525,0.395287777946524,6.10510501201433,1.27746076687442,0.890328018336276,1.62886959353576,0.989820737835213,1.32745138339963,0.485561272309963,0,0.377210159511796,0.590603785761546,1.53717573971964,0.775284879504663,0.727067458955011,0.712994756769443,0.316036757935816,1.05418608574999,1.03135543248187,1.02131881726136,1.98067203434441,0.905510786479282,1.28602221018955,1.24138163549592,0.891844088010353,1.31639216481697,0.913394847343798,0.23467170806371,0,0.220528398054962,6.10079135883476,2.42196640043858,0.965006798850494,1.19372344003136,0.656563598980245,0,20.9530591271876,0,0.619160603889667,0.370389054739423,0,0.27338845544205,0,0,0,0,0,0.949007980743406,0.813277868507395,0.108005340821801,0.209088296014469,0.218362563746178,0.539457385539283,0.495920734352016,0,0.90730481304255,0.621339313086926,0,0.598066184175915,0.330916980914195,0.583353565032143,0.516639293910924,0.337912250981556,0.234714477291508,0.13020438484395,0.524296722128554,0.241584120826006,0.288030006257865,0,0,0.308132871494482,0,0,0,0.120195449519969,0,0,0,0,0,0,0,1.36038230169127,0,0.179427713218951,0,0.19318959403219,0.750729901804728,2.74727436400898,1.50057865355346,1.00314420807073,6.7770221114048,5.9842280745933,6.30185064783336,6.70227411140382,4.7955776383945,9.06472676867641,3.37511250115903,7.65546045481175,4.07828168085784,3.10656187051092,3.84013186061454,6.78342284781753,3.92687293234509,5.34834777550247,5.03071590307158,3.8607136774503,6.22290837844523,5.35691148821125,3.53011130550997,3.28506375292937,4.56262739802432,5.47016390019621,3.46473577638565,4.86591158277006,3.33125719942557,1.90517476513229,3.70829843023538,1.54327376370964,3.70877310722976,2.64958056241915,3.77156177623957,2.30718548007139,1.90748951957857,4.50573891560218,5.17601592284318,3.46919892355874,4.024415403201,2.89376682581627,2.30866993537965,4.48913817326191,2.49133538060766,1.97008964751127,2.86461730218783,2.94379998253335,2.89359916471712,4.99621155875892,2.33931608445408,3.00819475667618,2.29545998482612,2.20591419119516,1.62307484934295
|short_description=p2@Nova1
|short_description=p2@Nova1
}}
}}

Latest revision as of 15:24, 26 September 2015

Short description:p2@Nova1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Nova1_5end
Coexpression cluster:MCL_coexpression_mm9:87
Association with transcript: -207bp_to_ENSMUST00000021438, NM_021361, uc007nmd.2, uc007nme.2_5end
EntrezGene:Nova1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Nova1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.56
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C325.09
Mouse Granule cells, donor2.CNhs12357.11731-123E331.74
Mouse Granule cells, donor3.CNhs12108.11636-122C732.96
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F117.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D516.12
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.55
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.27
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.24
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D715.67
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D427.17
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F429.92
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D825.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D625.93
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F628.62
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E130.76
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H12.46
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B214.35
cerebellum, neonate N30.CNhs11135.1395-42I210.05
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A422.32
corpus striatum, adult.CNhs10487.19-21D811.90
corpus striatum, neonate N00.CNhs11226.630-43F15.28
cortex, adult.CNhs10473.12-14D58.17
cortex, neonate N30.CNhs11107.1392-42F26.39
diencephalon, adult.CNhs10482.20-12F216.00
diencephalon, neonate N30.CNhs11201.1388-42B29.25
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C61.56
eyeball, embryo E14.CNhs10521.399-16E22.30
eyeball, embryo E15.CNhs10593.426-16C95.58
eyeball, embryo E17.CNhs11023.1261-18D44.37
eyeball, neonate N00.CNhs11207.633-15C64.42
eyeball, neonate N01.CNhs11140.1532-43E73.97
eyeball, neonate N02.CNhs11205.1551-44G83.37
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E85.89
hippocampus, neonate N00.CNhs11228.627-43G13.19
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C217.82
medulla oblongata, neonate N30.CNhs11200.1396-42A314.65
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.28
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I96.11
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C36.10
skin, neonate N00.CNhs11124.650-25G42.42
skin, neonate N03.CNhs11215.662-22H30.97
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C920.95
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E52.75
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.70
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I83.84
whole body, embryo E12.CNhs10587.857-27C96.78
whole body, embryo E13.CNhs10512.372-23H23.93
whole body, embryo E14.5.CNhs10578.420-27D25.35
whole body, embryo E14.CNhs10519.395-14B15.03
whole body, embryo E16.CNhs10514.453-14F23.86
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.47
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.46
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.87
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.51
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.18
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.02
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.49
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.94
whole body, embryo E17.5.CNhs10513.490-9F92.89
whole body, embryo E17.CNhs10517.475-3I55.00
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.01e-1723
neuroblast (sensu Vertebrata)5.01e-1723
neuron8.55e-1533
neuronal stem cell8.55e-1533
neuroblast8.55e-1533
electrically signaling cell8.55e-1533
neural cell1.44e-1243
ectodermal cell5.24e-1244
neurectodermal cell5.24e-1244
electrically responsive cell8.13e-1139
electrically active cell8.13e-1139

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure1.01e-3095
ectoderm1.01e-3095
presumptive ectoderm1.01e-3095
central nervous system1.24e-2973
neurectoderm2.83e-2864
neural plate2.83e-2864
presumptive neural plate2.83e-2864
nervous system3.52e-2875
ecto-epithelium3.48e-2673
regional part of nervous system8.51e-2654
neural tube3.45e-2452
neural rod3.45e-2452
future spinal cord3.45e-2452
neural keel3.45e-2452
gray matter2.24e-2034
pre-chordal neural plate3.64e-2049
brain1.49e-1947
future brain1.49e-1947
regional part of brain7.27e-1946
anterior neural tube2.28e-1640
brain grey matter6.79e-1629
regional part of telencephalon6.79e-1629
telencephalon6.79e-1629
regional part of forebrain1.53e-1539
forebrain1.53e-1539
future forebrain1.53e-1539
structure with developmental contribution from neural crest2.48e-1492
cerebral cortex1.14e-0921
cerebral hemisphere1.14e-0921
pallium1.14e-0921
regional part of cerebral cortex1.05e-0817
posterior neural tube1.31e-0812
chordal neural plate1.31e-0812
basal ganglion6.94e-088
nuclear complex of neuraxis6.94e-088
aggregate regional part of brain6.94e-088
collection of basal ganglia6.94e-088
cerebral subcortex6.94e-088
occipital lobe2.41e-0710
visual cortex2.41e-0710
neocortex2.41e-0710
spinal cord8.43e-076
dorsal region element8.43e-076
dorsum8.43e-076
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