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FFCP PHASE1:Mm9::chr11:68904523..68904540,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=168
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr11:68904523..68904540,+
|description=CAGE_peak_at_chr11:68904523..68904540,+
|description=CAGE_peak_at_chr11:68904523..68904540,+
|id=chr11:68904523..68904540,+
|id=chr11:68904523..68904540,+
|ontology_enrichment_celltype=CL:0000117!5.89e-12!23;CL:0000337!5.89e-12!23;CL:0000540!1.40e-11!33;CL:0000047!1.40e-11!33;CL:0000031!1.40e-11!33;CL:0000404!1.40e-11!33;CL:0000393!2.01e-10!39;CL:0000211!2.01e-10!39;CL:0002319!4.35e-08!43;CL:0000221!6.97e-08!44;CL:0000133!6.97e-08!44;CL:0000055!4.30e-07!50
|ontology_enrichment_celltype=CL:0000117!5.89e-12!23;CL:0000337!5.89e-12!23;CL:0000540!1.40e-11!33;CL:0000047!1.40e-11!33;CL:0000031!1.40e-11!33;CL:0000404!1.40e-11!33;CL:0000393!2.01e-10!39;CL:0000211!2.01e-10!39;CL:0002319!4.35e-08!43;CL:0000221!6.97e-08!44;CL:0000133!6.97e-08!44;CL:0000055!4.30e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.15e-14,23;CL:0000337,1.15e-14,23;CL:0000540,3.05e-09,33;CL:0000047,3.05e-09,33;CL:0000031,3.05e-09,33;CL:0000404,3.05e-09,33;CL:0000393,2.41e-07,39;CL:0000211,2.41e-07,39;CL:0002610,3.63e-07,3;CL:0002614,7.42e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!6.63e-20!73;UBERON:0005743!6.63e-20!73;UBERON:0000073!2.85e-19!75;UBERON:0001016!2.85e-19!75;UBERON:0004121!4.60e-18!102;UBERON:0000924!4.60e-18!102;UBERON:0006601!4.60e-18!102;UBERON:0001049!3.79e-17!52;UBERON:0005068!3.79e-17!52;UBERON:0006241!3.79e-17!52;UBERON:0007135!3.79e-17!52;UBERON:0000955!1.92e-16!50;UBERON:0006238!1.92e-16!50;UBERON:0002346!3.42e-16!71;UBERON:0003075!3.42e-16!71;UBERON:0007284!3.42e-16!71;UBERON:0002020!6.81e-16!34;UBERON:0002616!9.02e-16!49;UBERON:0000033!1.83e-15!63;UBERON:0002791!4.11e-13!29;UBERON:0003528!4.11e-13!29;UBERON:0001893!4.11e-13!29;UBERON:0003080!1.41e-12!40;UBERON:0002780!2.20e-12!39;UBERON:0001890!2.20e-12!39;UBERON:0006240!2.20e-12!39;UBERON:0003056!2.75e-12!49;UBERON:0007811!2.47e-10!86;UBERON:0000153!5.80e-10!94;UBERON:0000956!9.51e-09!21;UBERON:0001869!9.51e-09!21;UBERON:0000203!9.51e-09!21;UBERON:0002619!4.80e-07!17;UBERON:0000025!5.44e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.47e-39,54;UBERON:0001049,5.58e-33,52;UBERON:0005068,5.58e-33,52;UBERON:0006241,5.58e-33,52;UBERON:0007135,5.58e-33,52;UBERON:0002020,2.96e-31,34;UBERON:0001017,6.62e-31,73;UBERON:0001016,7.35e-30,75;UBERON:0000955,1.22e-29,47;UBERON:0006238,1.22e-29,47;UBERON:0002616,7.15e-28,46;UBERON:0002346,3.76e-27,64;UBERON:0003075,3.76e-27,64;UBERON:0007284,3.76e-27,64;UBERON:0004121,1.76e-26,95;UBERON:0000924,1.76e-26,95;UBERON:0006601,1.76e-26,95;UBERON:0003528,2.79e-25,29;UBERON:0002791,2.79e-25,29;UBERON:0001893,2.79e-25,29;UBERON:0010371,1.47e-24,73;UBERON:0002780,6.49e-24,39;UBERON:0001890,6.49e-24,39;UBERON:0006240,6.49e-24,39;UBERON:0003080,3.61e-23,40;UBERON:0003056,1.74e-19,49;UBERON:0002021,4.22e-18,10;UBERON:0000411,4.22e-18,10;UBERON:0001950,4.22e-18,10;UBERON:0010314,1.52e-16,92;UBERON:0000956,2.26e-15,21;UBERON:0001869,2.26e-15,21;UBERON:0000203,2.26e-15,21;UBERON:0002619,2.68e-14,17;UBERON:0002420,1.81e-11,8;UBERON:0007245,1.81e-11,8;UBERON:0010009,1.81e-11,8;UBERON:0010011,1.81e-11,8;UBERON:0000454,1.81e-11,8;UBERON:0000025,5.85e-11,114;UBERON:0004111,1.06e-10,122;UBERON:0003076,4.27e-10,12;UBERON:0003057,4.27e-10,12;UBERON:0004684,3.63e-07,3;UBERON:0002275,3.63e-07,3;UBERON:0011216,4.06e-07,194;UBERON:0001948,4.07e-07,5;UBERON:0002315,4.07e-07,5;UBERON:0002038,7.42e-07,3;UBERON:0009663,7.42e-07,3;UBERON:0009661,7.42e-07,3;UBERON:0000125,7.42e-07,3;UBERON:0002308,7.42e-07,3
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0,0.0797721589953364,0.171200729931206,0.174840804837995,0,0,0,0,0,0,0.765389611359628,0.297872853602656,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.506884656097573,0,0,0.218025156380447,0.219686182734472,0,0.139986421625363,0,0.503347818173209,0,0.672187598284928,0.257259436035947,0.286533439938757,0,0.404632921719196,0.528990979272033,1.90149421051854,0,0,0,0,0,0,0.768436610643109,0.518448061542388,1.21505344498522,0.841299845405528,1.14260393761521,1.76694832761291,0.61245399607477,0.479227355091182,0.919218786610021,2.20231761998777,2.93680877595932,1.53606533256243,0.791317726381163,1.18933936683133,1.04182674111352,2.51264699101243,2.25105044012672,1.06958773443767,3.53554302568401,2.98980529678116,0.559198337475902,0.075726193333184,0.151143120213571,0.289864488701678,0,0.679971333707751,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0.505524445014783,0.5709193985953,0.517875767294343,0.593768556259299,0.173485326766136,0,0,0.301445281105245,0.705532242814229,0.251333182659351,0.247194967734374,0.86759614151947,0,0,0.220841518460394,0,0,1.17112318804619,10.0534419270458,0.255457055208591,0,0,0,0.449371918214468,1.37250180845588,2.01046963380583,1.39059456153821,3.3243009452943,1.66230435647648,1.62241263067758,0.712875546952214,0.373220911830279,0,0.420883711772948,0.130120442962704,0,0.180062129805349,0.150704817835715,0.748401490664606,0.384341160854549,0.374806898238915,1.03481348295606,0,0,0.175951124163949,1.09597866213787,0.834141747676794,0,0.205782136407943,0.199034266818493,0,0,0.284163499395593,0.207125772535502,0,0.36012412292203,0,0.196764231747404,0.308534225774757,0,0,0.350296027101508,0,0,0.486412857275134,0.292399974850665,0.439100230582101,0,2.10289948564127,1.02904612379284,0,0,0.213288250535234,0.232236671860439,0.38660238396628,0,0,0,0.949058123089023,0,0,0.198956472041151,0.19496408711912,0,0,0,0.758671603812327,0.228497025219458,0,0.610953983535943,0.193952487167626,0.631222379012867,0.316182685621286,0,0.31399745568275,0.616985819609003,0,0,0.196558995113203,0.224862112384854,0,0,0.25462585178142,0,0.648540907100142,0,0,0,0,0,0.179397413521912,0,0.369506380333209,0,0,0.169745085775188,0,0,0.238043640886014,0.780534591431195,0.315270288212382,0.44292937929755,0.318909537314974,0.163863314715738,0.345369963731791,0.433947175744535,0,0,0.491764273019036,0,1.44495530989013,1.17211686592203,0,0.252470927204373,0,0.780877488593277,0.861693590931196,0.238968797952552,0.668396022247182,0.566153061577665,0,0.584511715822624,0.790575555893047,3.21321316421807,0.709700426041343,0.178065603667255,1.14020871547503,0.329940245945071,0,0,0.604647113929502,0.377210159511796,0,0,0,0,0.356497378384721,0.316036757935816,1.05418608574999,0,0.340439605753788,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0.658196082408484,2.13125464380219,0.23467170806371,0,0,0,1.29171541356724,0.241251699712623,0.238744688006273,0.164140899745061,0.291480836629851,0.927126510052548,0.341741761595705,0.206386867963223,0,0.188368457004691,0,0,0,0.139951452323658,0.138199973804424,0.954670618015114,0.632671987162271,0,0.216010681643603,0.209088296014469,0.218362563746178,0.269728692769641,0.247960367176008,0,0,1.86401793926078,0.56369293868419,0.299033092087958,0.496375471371293,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0.104859344425711,0.966336483304024,0.288030006257865,0,0.202725215290164,0,0.25984164595559,0,0.39736270956253,0.120195449519969,0.147689527174577,0.100966449948148,0.228620419965,0.302478555410522,0.292373642219257,0.0962118416403295,0.350630706544707,0,0,0,0.335769232728157,0,0.375364950902364,0,0,0,7.90652579663893,2.76195141904306,4.58316410751517,5.15559547031063,2.05524755931193,0,5.40018000185445,4.5032120322422,2.71885445390523,4.14208249401456,0.207574695168353,0,0,0,0,0,0.666740183404846,0,0,0.505394423527595,0.25347929989024,0,0.280924522409647,0.128050304809739,0.34461281373368,0,0.463537303779422,0.192909220463705,0,0.441596760403192,0,0.532427418478012,0.238436189947321,0.436039249896986,0,0.338458431566706,0.365855945745545,0,0.135804113845862,0.561142271657738,0.593175090620871,0.29551344712669,0.818462086339379,0,0,0.749431733813838,0.467863216890817,0.644613162144895,1.14772999241306,0.441182838239031,0
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0,0.0797721589953364,0.171200729931206,0.174840804837995,0,0,0,0,0,0,0.765389611359628,0.297872853602656,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.506884656097573,0,0,0.218025156380447,0.219686182734472,0,0.139986421625363,0,0.503347818173209,0,0.672187598284928,0.257259436035947,0.286533439938757,0,0.404632921719196,0.528990979272033,1.90149421051854,0,0,0,0,0,0,0.768436610643109,0.518448061542388,1.21505344498522,0.841299845405528,1.14260393761521,1.76694832761291,0.61245399607477,0.479227355091182,0.919218786610021,2.20231761998777,2.93680877595932,1.53606533256243,0.791317726381163,1.18933936683133,1.04182674111352,2.51264699101243,2.25105044012672,1.06958773443767,3.53554302568401,2.98980529678116,0.559198337475902,0.075726193333184,0.151143120213571,0.289864488701678,0,0.679971333707751,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0.505524445014783,0.5709193985953,0.517875767294343,0.593768556259299,0.173485326766136,0,0,0.301445281105245,0.705532242814229,0.251333182659351,0.247194967734374,0.86759614151947,0,0,0.220841518460394,0,0,1.17112318804619,10.0534419270458,0.255457055208591,0,0,0,0.449371918214468,1.37250180845588,2.01046963380583,1.39059456153821,3.3243009452943,1.66230435647648,1.62241263067758,0.712875546952214,0.373220911830279,0,0.420883711772948,0.130120442962704,0,0.180062129805349,0.150704817835715,0.748401490664606,0.384341160854549,0.374806898238915,1.03481348295606,0,0,0.175951124163949,1.09597866213787,0.834141747676794,0,0.205782136407943,0.199034266818493,0,0,0.284163499395593,0.207125772535502,0,0.36012412292203,0,0.196764231747404,0.308534225774757,0,0,0.350296027101508,0,0,0.486412857275134,0.292399974850665,0.439100230582101,0,2.10289948564127,1.02904612379284,0,0,0.213288250535234,0.232236671860439,0.38660238396628,0,0,0,0.949058123089023,0,0,0.198956472041151,0.19496408711912,0,0,0,0.758671603812327,0.228497025219458,0,0.610953983535943,0.193952487167626,0.631222379012867,0.316182685621286,0,0.31399745568275,0.616985819609003,0,0,0.196558995113203,0.224862112384854,0,0,0.25462585178142,0,0.648540907100142,0,0,0,0,0,0.179397413521912,0,0.369506380333209,0,0,0.169745085775188,0,0,0.238043640886014,0.780534591431195,0.315270288212382,0.44292937929755,0.318909537314974,0.163863314715738,0.345369963731791,0.433947175744535,0,0,0.491764273019036,0,1.44495530989013,1.17211686592203,0,0.252470927204373,0,0.780877488593277,0.861693590931196,0.238968797952552,0.668396022247182,0.566153061577665,0,0.584511715822624,0.790575555893047,3.21321316421807,0.709700426041343,0.178065603667255,1.14020871547503,0.329940245945071,0,0,0.604647113929502,0.377210159511796,0,0,0,0,0.356497378384721,0.316036757935816,1.05418608574999,0,0.340439605753788,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0.658196082408484,2.13125464380219,0.23467170806371,0,0,0,1.29171541356724,0.241251699712623,0.238744688006273,0.164140899745061,0.291480836629851,0.927126510052548,0.341741761595705,0.206386867963223,0,0.188368457004691,0,0,0,0.139951452323658,0.138199973804424,0.954670618015114,0.632671987162271,0,0.216010681643603,0.209088296014469,0.218362563746178,0.269728692769641,0.247960367176008,0,0,1.86401793926078,0.56369293868419,0.299033092087958,0.496375471371293,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0.104859344425711,0.966336483304024,0.288030006257865,0,0.202725215290164,0,0.25984164595559,0,0.39736270956253,0.120195449519969,0.147689527174577,0.100966449948148,0.228620419965,0.302478555410522,0.292373642219257,0.0962118416403295,0.350630706544707,0,0,0,0.335769232728157,0,0.375364950902364,0,0,0,7.90652579663893,2.76195141904306,4.58316410751517,5.15559547031063,2.05524755931193,0,5.40018000185445,4.5032120322422,2.71885445390523,4.14208249401456,0.207574695168353,0,0,0,0,0,0.666740183404846,0,0,0.505394423527595,0.25347929989024,0,0.280924522409647,0.128050304809739,0.34461281373368,0,0.463537303779422,0.192909220463705,0,0.441596760403192,0,0.532427418478012,0.238436189947321,0.436039249896986,0,0.338458431566706,0.365855945745545,0,0.135804113845862,0.561142271657738,0.593175090620871,0.29551344712669,0.818462086339379,0,0,0.749431733813838,0.467863216890817,0.644613162144895,1.14772999241306,0.441182838239031,0
|short_description=p@chr11:68904523..68904540,+
|short_description=p@chr11:68904523..68904540,+
}}
}}

Latest revision as of 09:29, 6 August 2015

Short description:p@chr11:68904523..68904540, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr11:68904523..68904540, +
Coexpression cluster:MCL_coexpression_mm9:168
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p@chr11:68904523..68904540+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.94
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I210.05
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F12.01
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F23.32
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A31.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.16
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.47e-3954
neural tube5.58e-3352
neural rod5.58e-3352
future spinal cord5.58e-3352
neural keel5.58e-3352
gray matter2.96e-3134
central nervous system6.62e-3173
nervous system7.35e-3075
brain1.22e-2947
future brain1.22e-2947
regional part of brain7.15e-2846
neurectoderm3.76e-2764
neural plate3.76e-2764
presumptive neural plate3.76e-2764
ectoderm-derived structure1.76e-2695
ectoderm1.76e-2695
presumptive ectoderm1.76e-2695
brain grey matter2.79e-2529
regional part of telencephalon2.79e-2529
telencephalon2.79e-2529
ecto-epithelium1.47e-2473
regional part of forebrain6.49e-2439
forebrain6.49e-2439
future forebrain6.49e-2439
anterior neural tube3.61e-2340
pre-chordal neural plate1.74e-1949
occipital lobe4.22e-1810
visual cortex4.22e-1810
neocortex4.22e-1810
structure with developmental contribution from neural crest1.52e-1692
cerebral cortex2.26e-1521
cerebral hemisphere2.26e-1521
pallium2.26e-1521
regional part of cerebral cortex2.68e-1417
basal ganglion1.81e-118
nuclear complex of neuraxis1.81e-118
aggregate regional part of brain1.81e-118
collection of basal ganglia1.81e-118
cerebral subcortex1.81e-118
tube5.85e-11114
anatomical conduit1.06e-10122
posterior neural tube4.27e-1012
chordal neural plate4.27e-1012
raphe nuclei3.63e-073
reticular formation3.63e-073
organ system subdivision4.06e-07194
regional part of spinal cord4.07e-075
gray matter of spinal cord4.07e-075
substantia nigra7.42e-073
telencephalic nucleus7.42e-073
midbrain nucleus7.42e-073
neural nucleus7.42e-073
nucleus of brain7.42e-073
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