FFCP PHASE1:Mm9::chr12:112908947..112908956,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=303 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:112908947..112908956,- | |||
|description=CAGE_peak_at_chr12:112908947..112908956,- | |description=CAGE_peak_at_chr12:112908947..112908956,- | ||
|id=chr12:112908947..112908956,- | |id=chr12:112908947..112908956,- | ||
|ontology_enrichment_celltype=CL:0002453!1.42e-11!8;CL:0000333!1.84e-10!10;CL:0000095!1.84e-10!10;CL:0000243!1.84e-10!10;CL:0000123!1.84e-10!10;CL:0000125!1.84e-10!10;CL:0000030!1.84e-10!10;CL:0000339!1.84e-10!10;CL:0000128!6.55e-09!6;CL:0000126!6.55e-09!6;CL:0000127!6.55e-09!6;CL:0002319!3.20e-07!43;CL:0000221!6.24e-07!44;CL:0000133!6.24e-07!44 | |ontology_enrichment_celltype=CL:0002453!1.42e-11!8;CL:0000333!1.84e-10!10;CL:0000095!1.84e-10!10;CL:0000243!1.84e-10!10;CL:0000123!1.84e-10!10;CL:0000125!1.84e-10!10;CL:0000030!1.84e-10!10;CL:0000339!1.84e-10!10;CL:0000128!6.55e-09!6;CL:0000126!6.55e-09!6;CL:0000127!6.55e-09!6;CL:0002319!3.20e-07!43;CL:0000221!6.24e-07!44;CL:0000133!6.24e-07!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0002453,5.90e-37,8;CL:0000333,2.14e-29,10;CL:0000095,2.14e-29,10;CL:0000243,2.14e-29,10;CL:0000123,2.14e-29,10;CL:0000125,2.14e-29,10;CL:0000030,2.14e-29,10;CL:0000339,2.14e-29,10;CL:0000128,1.69e-27,6;CL:0000126,1.69e-27,6;CL:0000127,1.69e-27,6;CL:0002319,1.06e-11,43;CL:0000221,2.13e-11,44;CL:0000133,2.13e-11,44;CL:0000878,4.77e-11,2;CL:0000129,4.77e-11,2;CL:0002605,2.47e-10,2;CL:0002604,2.47e-10,2;CL:0002603,5.21e-10,2;CL:0002614,3.89e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.87e-12!75;UBERON:0001016!5.87e-12!75;UBERON:0003076!6.99e-12!12;UBERON:0003057!6.99e-12!12;UBERON:0001017!8.33e-12!73;UBERON:0005743!8.33e-12!73;UBERON:0000033!8.15e-11!63;UBERON:0004121!1.55e-10!102;UBERON:0000924!1.55e-10!102;UBERON:0006601!1.55e-10!102;UBERON:0002346!6.56e-10!71;UBERON:0003075!6.56e-10!71;UBERON:0007284!6.56e-10!71;UBERON:0001049!9.31e-10!52;UBERON:0005068!9.31e-10!52;UBERON:0006241!9.31e-10!52;UBERON:0007135!9.31e-10!52;UBERON:0000955!1.04e-09!50;UBERON:0006238!1.04e-09!50;UBERON:0002616!4.44e-09!49;UBERON:0004733!1.03e-08!6;UBERON:0004732!1.03e-08!6;UBERON:0002028!1.03e-08!6;UBERON:0007277!1.03e-08!6;UBERON:0002298!1.60e-08!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004733,3.16e-19,6;UBERON:0004732,3.16e-19,6;UBERON:0002028,3.16e-19,6;UBERON:0007277,3.16e-19,6;UBERON:0001017,3.14e-14,73;UBERON:0001016,8.75e-14,75;UBERON:0003076,1.05e-13,12;UBERON:0003057,1.05e-13,12;UBERON:0001896,1.04e-10,2;UBERON:0002298,1.04e-10,2;UBERON:0005290,1.04e-10,2;UBERON:0010096,1.04e-10,2;UBERON:0002037,1.13e-10,4;UBERON:0002680,1.13e-10,4;UBERON:0001895,1.13e-10,4;UBERON:0010092,1.13e-10,4;UBERON:0006215,1.13e-10,4;UBERON:0004121,2.33e-10,95;UBERON:0000924,2.33e-10,95;UBERON:0006601,2.33e-10,95;UBERON:0001049,3.44e-09,52;UBERON:0005068,3.44e-09,52;UBERON:0006241,3.44e-09,52;UBERON:0007135,3.44e-09,52;UBERON:0000073,9.25e-09,54;UBERON:0002616,1.31e-08,46;UBERON:0000955,2.14e-08,47;UBERON:0006238,2.14e-08,47;UBERON:0002346,3.77e-07,64;UBERON:0003075,3.77e-07,64;UBERON:0007284,3.77e-07,64;UBERON:0002038,3.89e-07,3;UBERON:0009663,3.89e-07,3;UBERON:0009661,3.89e-07,3;UBERON:0000125,3.89e-07,3;UBERON:0002308,3.89e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,1.30815093828268,1.31811709640683,2.52758868796568,1.1198913730029,5.75010257459886,0,0,0,0,0,0,0,0,0,0.338844532069132,0.889294796111139,0,0,0,3.59520132622086,7.30014780110954,0,0,0,0.285650984403804,0.441737081903227,0,0.0958454710182364,0,3.30347642998166,0.893811366596314,0.921639199537461,0,0,0,1.95428099300967,1.68828783009504,0.61119299110724,0.294628585473668,0.284743361598206,0,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,1.86391761218122,0.878342391034642,1.04723353406728,0,0,0,0,0.449371918214468,0,0,0.173824320192276,0,1.0389402227978,0.324482526135515,0,0.248813941220186,0,0,0.390361328888111,0,0,0.150704817835715,0.272145996605311,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0,0.295220295959204,0.31399745568275,0.370191491765402,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,3.85321415970701,2.46144541843627,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0,0,0.164970122972535,0,0,0.302323556964751,0,0.295301892880773,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.938686832254841,0.63549621259146,0.661585194164886,0,0,0,0,0,0,5.00648315428376,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0.330613822901344,0.785267825952089,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,2.51146472241848,0.187682475451182,0.36630324853453,0,1.00314420807073,0,0,0,0.171853182343688,0.685082519770642,0.755393897389701,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,1.30815093828268,1.31811709640683,2.52758868796568,1.1198913730029,5.75010257459886,0,0,0,0,0,0,0,0,0,0.338844532069132,0.889294796111139,0,0,0,3.59520132622086,7.30014780110954,0,0,0,0.285650984403804,0.441737081903227,0,0.0958454710182364,0,3.30347642998166,0.893811366596314,0.921639199537461,0,0,0,1.95428099300967,1.68828783009504,0.61119299110724,0.294628585473668,0.284743361598206,0,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,1.86391761218122,0.878342391034642,1.04723353406728,0,0,0,0,0.449371918214468,0,0,0.173824320192276,0,1.0389402227978,0.324482526135515,0,0.248813941220186,0,0,0.390361328888111,0,0,0.150704817835715,0.272145996605311,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0,0.295220295959204,0.31399745568275,0.370191491765402,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,3.85321415970701,2.46144541843627,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0,0,0.164970122972535,0,0,0.302323556964751,0,0.295301892880773,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.938686832254841,0.63549621259146,0.661585194164886,0,0,0,0,0,0,5.00648315428376,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0.330613822901344,0.785267825952089,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,2.51146472241848,0.187682475451182,0.36630324853453,0,1.00314420807073,0,0,0,0.171853182343688,0.685082519770642,0.755393897389701,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | ||
|short_description=p@chr12:112908947..112908956,- | |short_description=p@chr12:112908947..112908956,- | ||
}} | }} |
Latest revision as of 18:33, 4 August 2015
Short description: | p@chr12:112908947..112908956, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:112908947..112908956, - |
Coexpression cluster: | MCL_coexpression_mm9:303 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 5.90e-37 | 8 |
migratory neural crest cell | 2.14e-29 | 10 |
neuron associated cell | 2.14e-29 | 10 |
glial cell (sensu Vertebrata) | 2.14e-29 | 10 |
neuron associated cell (sensu Vertebrata) | 2.14e-29 | 10 |
glial cell | 2.14e-29 | 10 |
glioblast | 2.14e-29 | 10 |
glioblast (sensu Vertebrata) | 2.14e-29 | 10 |
oligodendrocyte | 1.69e-27 | 6 |
macroglial cell | 1.69e-27 | 6 |
astrocyte | 1.69e-27 | 6 |
neural cell | 1.06e-11 | 43 |
ectodermal cell | 2.13e-11 | 44 |
neurectodermal cell | 2.13e-11 | 44 |
central nervous system macrophage | 4.77e-11 | 2 |
microglial cell | 4.77e-11 | 2 |
astrocyte of the cerebral cortex | 2.47e-10 | 2 |
astrocyte of the hippocampus | 2.47e-10 | 2 |
astrocyte of the cerebellum | 5.21e-10 | 2 |
neuron of the substantia nigra | 3.89e-07 | 3 |