FFCP PHASE1:Mm9::chr7:133416361..133416372,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=104175 | |EntrezGene=104175 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=Q8QZX0 | |UniProt=Q8QZX0 | ||
|association_with_transcript=228bp_to_ENSMUST00000056028,NM_145587,uc009jqw.1_5end | |association_with_transcript=228bp_to_ENSMUST00000056028,NM_145587,uc009jqw.1_5end | ||
|cluster_id=chr7:133416361..133416372,+ | |||
|description=CAGE_peak_7_at_Sbk1_5end | |description=CAGE_peak_7_at_Sbk1_5end | ||
|id=chr7:133416361..133416372,+ | |id=chr7:133416361..133416372,+ | ||
|ontology_enrichment_celltype=CL:0000540!6.98e-15!33;CL:0000047!6.98e-15!33;CL:0000031!6.98e-15!33;CL:0000404!6.98e-15!33;CL:0000117!4.92e-14!23;CL:0000337!4.92e-14!23;CL:0000221!3.43e-12!44;CL:0000133!3.43e-12!44;CL:0002319!6.15e-12!43;CL:0000393!2.61e-11!39;CL:0000211!2.61e-11!39;CL:0000055!6.34e-09!50;CL:0002321!1.74e-08!70;CL:0000220!1.74e-08!70;CL:0000548!7.70e-07!115;CL:0000004!7.70e-07!115;CL:0000255!7.70e-07!115 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.42e-32,23;CL:0000337,1.42e-32,23;CL:0000540,7.13e-24,33;CL:0000047,7.13e-24,33;CL:0000031,7.13e-24,33;CL:0000404,7.13e-24,33;CL:0002319,4.27e-21,43;CL:0000221,1.69e-20,44;CL:0000133,1.69e-20,44;CL:0000393,1.84e-19,39;CL:0000211,1.84e-19,39;CL:0002609,9.23e-16,6;CL:0002321,1.47e-13,70;CL:0000723,1.71e-12,91;CL:0000048,1.71e-12,91;CL:0000034,2.42e-11,97;CL:0000120,9.95e-09,3;CL:0002608,1.25e-08,3;CL:0002613,1.86e-08,3;CL:0002612,3.61e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.29e-18!73;UBERON:0005743!2.29e-18!73;UBERON:0000073!3.93e-17!75;UBERON:0001016!3.93e-17!75;UBERON:0002020!7.16e-16!34;UBERON:0001049!1.86e-14!52;UBERON:0005068!1.86e-14!52;UBERON:0006241!1.86e-14!52;UBERON:0007135!1.86e-14!52;UBERON:0002346!3.07e-14!71;UBERON:0003075!3.07e-14!71;UBERON:0007284!3.07e-14!71;UBERON:0004121!1.07e-13!102;UBERON:0000924!1.07e-13!102;UBERON:0006601!1.07e-13!102;UBERON:0002791!2.04e-12!29;UBERON:0003528!2.04e-12!29;UBERON:0001893!2.04e-12!29;UBERON:0002780!2.01e-11!39;UBERON:0001890!2.01e-11!39;UBERON:0006240!2.01e-11!39;UBERON:0002616!2.77e-11!49;UBERON:0003080!9.28e-11!40;UBERON:0000955!1.03e-10!50;UBERON:0006238!1.03e-10!50;UBERON:0003056!1.21e-09!49;UBERON:0000033!3.47e-09!63;UBERON:0000956!1.84e-08!21;UBERON:0001869!1.84e-08!21;UBERON:0000203!1.84e-08!21;UBERON:0007811!7.99e-08!86;UBERON:0002619!3.16e-07!17;UBERON:0000153!9.87e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.13e-27,34;UBERON:0001017,3.57e-20,73;UBERON:0001049,1.74e-19,52;UBERON:0005068,1.74e-19,52;UBERON:0006241,1.74e-19,52;UBERON:0007135,1.74e-19,52;UBERON:0001016,1.84e-19,75;UBERON:0000073,1.48e-18,54;UBERON:0003528,5.92e-18,29;UBERON:0002791,5.92e-18,29;UBERON:0001893,5.92e-18,29;UBERON:0002346,8.55e-15,64;UBERON:0003075,8.55e-15,64;UBERON:0007284,8.55e-15,64;UBERON:0000956,3.48e-14,21;UBERON:0001869,3.48e-14,21;UBERON:0000203,3.48e-14,21;UBERON:0004121,5.46e-14,95;UBERON:0000924,5.46e-14,95;UBERON:0006601,5.46e-14,95;UBERON:0002616,7.76e-13,46;UBERON:0000955,1.79e-12,47;UBERON:0006238,1.79e-12,47;UBERON:0001948,2.19e-12,5;UBERON:0002315,2.19e-12,5;UBERON:0002780,2.26e-12,39;UBERON:0001890,2.26e-12,39;UBERON:0006240,2.26e-12,39;UBERON:0010371,2.69e-12,73;UBERON:0003080,5.73e-12,40;UBERON:0002240,2.96e-10,6;UBERON:0005174,2.96e-10,6;UBERON:0001137,2.96e-10,6;UBERON:0002619,1.32e-09,17;UBERON:0003056,4.33e-09,49;UBERON:0003076,6.19e-09,12;UBERON:0003057,6.19e-09,12;UBERON:0010314,1.20e-08,92;UBERON:0002257,3.61e-08,3;UBERON:0002021,2.42e-07,10;UBERON:0000411,2.42e-07,10;UBERON:0001950,2.42e-07,10 | |||
|phase1_expression=0.160148847104794,0,0.454999239389536,2.11724947914781,2.00358291978539,0.16787927191189,0.467225281191051,0.774739940649458,0.281577444303333,0.234064526321993,0.171217968225505,0.159544317990673,0.684802919724823,0.611942816932982,0.333109761815663,0.607425802169478,1.39912375625629,2.36596624018678,2.33094537129756,1.27316895539409,0.255129870453209,0.0992909512008853,0.261199789138935,0,0.22940928106717,0,0,0.646413698057667,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,0.332469290716985,0,0,0,0,1.17646297606203,0,0,0,0.101376931219515,0.183546752161682,0,1.09012578190223,0,0,0.279972843250725,0,2.85230430298152,1.45072428402269,0,0,0,0,6.87875966922632,11.6378015439847,5.70448263155561,0,0,0,0,0.7104801149461,0.898800331555214,1.92109152660777,6.73982480005105,19.0358373047684,6.09942387919008,4.28476476605705,2.65042249141936,4.40966877173835,6.90087391331302,10.1114066527102,0,0.510749352340751,0.307213066512487,5.67111037239834,10.3381037270723,4.16730696445408,1.3959149950069,0.56276261003168,0.45839474333043,4.41942878210502,4.12877874317399,4.28718725398191,0,0,0,0,0,0,0,0.896053774194671,0,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.11418387971906,0,0.29688427812965,0,0.608930956624282,0,0.150722640552623,0.23517741427141,0.251333182659351,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,0,0.292780797011547,3.35114730901528,0,0,0,0,0,0.457500602818626,0.753926112677186,0,0,0,0,0,0.248813941220186,0,0.210441855886474,0,0.229902104433473,0,0.30140963567143,0.0680364991513279,0.384341160854549,0.468508622798644,0,0.215567992932842,0.567318240503458,0.175951124163949,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.823236899034275,0,0,0.426576501070468,0.232236671860439,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0,0,0,0.482443521363367,0,0.568474235311454,0.488894929326078,0,0,0,0.238043640886014,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0.631016438832513,0.780877488593277,0.646270193198397,0.716906393857656,0,0.566153061577665,0,0.584511715822624,2.37172666767914,0,0,0.178065603667255,0.325773918707152,0.164970122972535,0,0.485561272309963,0.604647113929502,0,0,0,0,0,0,0,0,0,0,0.900305470156551,0.776152102696527,0.428674070063185,0.532020700926821,0.535106452806212,0.329098041204242,0,0,0,0,0.16488625294148,0.161464426695906,0,0.119372344003136,0,0,0.18542530201051,0,0,0,0.376736914009382,0.136694227721025,0.228778173206523,0,0,0.138199973804424,0,0.316335993581135,0,0.216010681643603,0.209088296014469,0,0,0,0,0,0,0,0.747582730219894,0.165458490457098,0.194451188344048,0.645799117388655,0,0.117357238645754,0,0.104859344425711,0,0,0.316011120628178,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0.120195449519969,0.443068581523732,0,0.0762068066549998,0,0,0.288635524920988,0.233753804363138,0,0.221985953374065,0,0.335769232728157,0,0,0,0,0,1.12950368523413,1.38097570952153,2.29158205375759,2.57779773515531,2.05524755931193,0.755393897389701,0.675022500231806,1.80128481289688,0.453142408984205,0.51776031175182,1.14166082342594,0.798049746802062,0.853668028770671,0.486213434136588,0.209613162627982,0.551530525350042,0.44449345560323,0,0,0,0.25347929989024,0.377252682772152,0.561849044819294,0.256100609619477,0.229741875822453,0,0.231768651889711,0.77163688185482,0,0.735994600671987,0.342869252385415,0.177475806159338,0.476872379894642,0.290692833264657,0.564656282491984,0.169229215783353,0.548783918618318,0.263069711437843,0.271608227691724,0,0,0.0985044823755635,0,0.154936841185966,0.385813221962283,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0 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|phase1_expression=0.160148847104794,0,0.454999239389536,2.11724947914781,2.00358291978539,0.16787927191189,0.467225281191051,0.774739940649458,0.281577444303333,0.234064526321993,0.171217968225505,0.159544317990673,0.684802919724823,0.611942816932982,0.333109761815663,0.607425802169478,1.39912375625629,2.36596624018678,2.33094537129756,1.27316895539409,0.255129870453209,0.0992909512008853,0.261199789138935,0,0.22940928106717,0,0,0.646413698057667,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,0.332469290716985,0,0,0,0,1.17646297606203,0,0,0,0.101376931219515,0.183546752161682,0,1.09012578190223,0,0,0.279972843250725,0,2.85230430298152,1.45072428402269,0,0,0,0,6.87875966922632,11.6378015439847,5.70448263155561,0,0,0,0,0.7104801149461,0.898800331555214,1.92109152660777,6.73982480005105,19.0358373047684,6.09942387919008,4.28476476605705,2.65042249141936,4.40966877173835,6.90087391331302,10.1114066527102,0,0.510749352340751,0.307213066512487,5.67111037239834,10.3381037270723,4.16730696445408,1.3959149950069,0.56276261003168,0.45839474333043,4.41942878210502,4.12877874317399,4.28718725398191,0,0,0,0,0,0,0,0.896053774194671,0,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.11418387971906,0,0.29688427812965,0,0.608930956624282,0,0.150722640552623,0.23517741427141,0.251333182659351,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,0,0.292780797011547,3.35114730901528,0,0,0,0,0,0.457500602818626,0.753926112677186,0,0,0,0,0,0.248813941220186,0,0.210441855886474,0,0.229902104433473,0,0.30140963567143,0.0680364991513279,0.384341160854549,0.468508622798644,0,0.215567992932842,0.567318240503458,0.175951124163949,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.823236899034275,0,0,0.426576501070468,0.232236671860439,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0,0,0,0.482443521363367,0,0.568474235311454,0.488894929326078,0,0,0,0.238043640886014,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0.631016438832513,0.780877488593277,0.646270193198397,0.716906393857656,0,0.566153061577665,0,0.584511715822624,2.37172666767914,0,0,0.178065603667255,0.325773918707152,0.164970122972535,0,0.485561272309963,0.604647113929502,0,0,0,0,0,0,0,0,0,0,0.900305470156551,0.776152102696527,0.428674070063185,0.532020700926821,0.535106452806212,0.329098041204242,0,0,0,0,0.16488625294148,0.161464426695906,0,0.119372344003136,0,0,0.18542530201051,0,0,0,0.376736914009382,0.136694227721025,0.228778173206523,0,0,0.138199973804424,0,0.316335993581135,0,0.216010681643603,0.209088296014469,0,0,0,0,0,0,0,0.747582730219894,0.165458490457098,0.194451188344048,0.645799117388655,0,0.117357238645754,0,0.104859344425711,0,0,0.316011120628178,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0.120195449519969,0.443068581523732,0,0.0762068066549998,0,0,0.288635524920988,0.233753804363138,0,0.221985953374065,0,0.335769232728157,0,0,0,0,0,1.12950368523413,1.38097570952153,2.29158205375759,2.57779773515531,2.05524755931193,0.755393897389701,0.675022500231806,1.80128481289688,0.453142408984205,0.51776031175182,1.14166082342594,0.798049746802062,0.853668028770671,0.486213434136588,0.209613162627982,0.551530525350042,0.44449345560323,0,0,0,0.25347929989024,0.377252682772152,0.561849044819294,0.256100609619477,0.229741875822453,0,0.231768651889711,0.77163688185482,0,0.735994600671987,0.342869252385415,0.177475806159338,0.476872379894642,0.290692833264657,0.564656282491984,0.169229215783353,0.548783918618318,0.263069711437843,0.271608227691724,0,0,0.0985044823755635,0,0.154936841185966,0.385813221962283,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0 | ||
|short_description=p7@Sbk1 | |short_description=p7@Sbk1 | ||
}} | }} |
Latest revision as of 20:42, 25 September 2015
Short description: | p7@Sbk1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Sbk1_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 228bp_to_ENSMUST00000056028, NM_145587, uc009jqw.1_5end |
EntrezGene: | Sbk1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.42e-32 | 23 |
neuroblast (sensu Vertebrata) | 1.42e-32 | 23 |
neuron | 7.13e-24 | 33 |
neuronal stem cell | 7.13e-24 | 33 |
neuroblast | 7.13e-24 | 33 |
electrically signaling cell | 7.13e-24 | 33 |
neural cell | 4.27e-21 | 43 |
ectodermal cell | 1.69e-20 | 44 |
neurectodermal cell | 1.69e-20 | 44 |
electrically responsive cell | 1.84e-19 | 39 |
electrically active cell | 1.84e-19 | 39 |
neuron of cerebral cortex | 9.23e-16 | 6 |
embryonic cell | 1.47e-13 | 70 |
somatic stem cell | 1.71e-12 | 91 |
multi fate stem cell | 1.71e-12 | 91 |
stem cell | 2.42e-11 | 97 |
granule cell | 9.95e-09 | 3 |
hippocampal neuron | 1.25e-08 | 3 |
striatum neuron | 1.86e-08 | 3 |
neuron of the ventral spinal cord | 3.61e-08 | 3 |