FFCP PHASE1:Mm9::chr7:29856616..29856632,+: Difference between revisions
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|id=chr7:29856616..29856632,+ | |id=chr7:29856616..29856632,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.36e-16!23;CL:0000337!1.36e-16!23;CL:0000540!1.87e-15!33;CL:0000047!1.87e-15!33;CL:0000031!1.87e-15!33;CL:0000404!1.87e-15!33;CL:0000393!5.82e-12!39;CL:0000211!5.82e-12!39;CL:0000221!9.88e-11!44;CL:0000133!9.88e-11!44;CL:0002319!3.35e-10!43;CL:0002609!2.66e-09!6;CL:0000055!7.64e-08!50 | |ontology_enrichment_celltype=CL:0000117!1.36e-16!23;CL:0000337!1.36e-16!23;CL:0000540!1.87e-15!33;CL:0000047!1.87e-15!33;CL:0000031!1.87e-15!33;CL:0000404!1.87e-15!33;CL:0000393!5.82e-12!39;CL:0000211!5.82e-12!39;CL:0000221!9.88e-11!44;CL:0000133!9.88e-11!44;CL:0002319!3.35e-10!43;CL:0002609!2.66e-09!6;CL:0000055!7.64e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.81e-37,23;CL:0000337,5.81e-37,23;CL:0000540,8.04e-29,33;CL:0000047,8.04e-29,33;CL:0000031,8.04e-29,33;CL:0000404,8.04e-29,33;CL:0000393,5.00e-24,39;CL:0000211,5.00e-24,39;CL:0002319,1.43e-21,43;CL:0000221,4.99e-21,44;CL:0000133,4.99e-21,44;CL:0002609,1.01e-19,6;CL:0000120,1.77e-14,3;CL:0002613,2.97e-14,3;CL:0002612,8.23e-14,3;CL:0002321,2.60e-12,70;CL:0000723,6.86e-09,91;CL:0000048,6.86e-09,91;CL:0000034,3.50e-08,97;CL:0002608,4.88e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!9.68e-14!71;UBERON:0003075!9.68e-14!71;UBERON:0007284!9.68e-14!71;UBERON:0002020!3.34e-13!34;UBERON:0001017!4.38e-13!73;UBERON:0005743!4.38e-13!73;UBERON:0000073!1.88e-12!75;UBERON:0001016!1.88e-12!75;UBERON:0003056!8.48e-12!49;UBERON:0004121!1.28e-11!102;UBERON:0000924!1.28e-11!102;UBERON:0006601!1.28e-11!102;UBERON:0001049!1.22e-10!52;UBERON:0005068!1.22e-10!52;UBERON:0006241!1.22e-10!52;UBERON:0007135!1.22e-10!52;UBERON:0000033!2.05e-10!63;UBERON:0002780!6.12e-09!39;UBERON:0001890!6.12e-09!39;UBERON:0006240!6.12e-09!39;UBERON:0002791!8.35e-09!29;UBERON:0003528!8.35e-09!29;UBERON:0001893!8.35e-09!29;UBERON:0003080!1.44e-08!40;UBERON:0000955!8.30e-08!50;UBERON:0006238!8.30e-08!50;UBERON:0000369!2.44e-07!5;UBERON:0002435!2.44e-07!5;UBERON:0000204!2.44e-07!5;UBERON:0010082!2.44e-07!5;UBERON:0002616!2.92e-07!49;UBERON:0001948!6.02e-07!5;UBERON:0002315!6.02e-07!5 | |ontology_enrichment_uberon=UBERON:0002346!9.68e-14!71;UBERON:0003075!9.68e-14!71;UBERON:0007284!9.68e-14!71;UBERON:0002020!3.34e-13!34;UBERON:0001017!4.38e-13!73;UBERON:0005743!4.38e-13!73;UBERON:0000073!1.88e-12!75;UBERON:0001016!1.88e-12!75;UBERON:0003056!8.48e-12!49;UBERON:0004121!1.28e-11!102;UBERON:0000924!1.28e-11!102;UBERON:0006601!1.28e-11!102;UBERON:0001049!1.22e-10!52;UBERON:0005068!1.22e-10!52;UBERON:0006241!1.22e-10!52;UBERON:0007135!1.22e-10!52;UBERON:0000033!2.05e-10!63;UBERON:0002780!6.12e-09!39;UBERON:0001890!6.12e-09!39;UBERON:0006240!6.12e-09!39;UBERON:0002791!8.35e-09!29;UBERON:0003528!8.35e-09!29;UBERON:0001893!8.35e-09!29;UBERON:0003080!1.44e-08!40;UBERON:0000955!8.30e-08!50;UBERON:0006238!8.30e-08!50;UBERON:0000369!2.44e-07!5;UBERON:0002435!2.44e-07!5;UBERON:0000204!2.44e-07!5;UBERON:0010082!2.44e-07!5;UBERON:0002616!2.92e-07!49;UBERON:0001948!6.02e-07!5;UBERON:0002315!6.02e-07!5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.98e-20,34;UBERON:0001017,2.50e-15,73;UBERON:0001016,7.54e-15,75;UBERON:0000369,2.05e-14,5;UBERON:0002435,2.05e-14,5;UBERON:0000204,2.05e-14,5;UBERON:0010082,2.05e-14,5;UBERON:0003528,2.91e-14,29;UBERON:0002791,2.91e-14,29;UBERON:0001893,2.91e-14,29;UBERON:0002257,8.23e-14,3;UBERON:0001049,1.25e-12,52;UBERON:0005068,1.25e-12,52;UBERON:0006241,1.25e-12,52;UBERON:0007135,1.25e-12,52;UBERON:0000073,4.41e-12,54;UBERON:0002346,1.53e-11,64;UBERON:0003075,1.53e-11,64;UBERON:0007284,1.53e-11,64;UBERON:0004121,3.76e-11,95;UBERON:0000924,3.76e-11,95;UBERON:0006601,3.76e-11,95;UBERON:0002780,3.26e-10,39;UBERON:0001890,3.26e-10,39;UBERON:0006240,3.26e-10,39;UBERON:0003080,6.42e-10,40;UBERON:0010371,7.83e-10,73;UBERON:0002420,4.48e-09,8;UBERON:0007245,4.48e-09,8;UBERON:0010009,4.48e-09,8;UBERON:0010011,4.48e-09,8;UBERON:0000454,4.48e-09,8;UBERON:0001948,1.71e-08,5;UBERON:0002315,1.71e-08,5;UBERON:0002616,2.01e-08,46;UBERON:0000955,3.27e-08,47;UBERON:0006238,3.27e-08,47;UBERON:0003056,8.19e-08,49;UBERON:0000956,1.55e-07,21;UBERON:0001869,1.55e-07,21;UBERON:0000203,1.55e-07,21;UBERON:0010314,2.58e-07,92;UBERON:0002240,3.74e-07,6;UBERON:0005174,3.74e-07,6;UBERON:0001137,3.74e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.08107613008592,6.34789175126439,1.90149421051854,0,0,0,0,0,0,0,11.4058573539325,7.56033254657468,9.46462326081219,0.285650984403804,0.662605622854841,2.69479758272899,2.39613677545591,0.919218786610021,0,0.127687338085188,0,2.2420668914133,2.28719109006024,3.12548022334056,0,0,0,1.76777151284201,1.56608848879013,2.42319279572891,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,1.00523481690292,0.347648640384553,0.511430914660661,0.41557608911912,0.486723789203273,0,0,0,0,0.130120442962704,0.229902104433473,0,0.150704817835715,0.136072998302656,0.384341160854549,0.281105173679186,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44066457330998,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0.252470927204373,0.315508219416257,1.17131623288992,0.861693590931196,0,0,0,0,0,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.643011105094777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0.755393897389701,0.675022500231806,0,0,0,0.103787347584177,1.99512436700516,1.02440163452481,0,1.04806581313991,0,0.222246727801615,0.618105171716683,0.320919209591815,0.505394423527595,0.25347929989024,0.565879024158229,0.280924522409647,0.192075457214608,0.17230640686684,0,0.463537303779422,0.192909220463705,0.412085900803307,0,0.685738504770831,0.70990322463735,0.476872379894642,0.581385666529314,0.0941093804153306,0.169229215783353,0.365855945745545,0.263069711437843,0.135804113845862,0,0.355905054372522,0.0985044823755635,0.818462086339379,0.154936841185966,0,0.749431733813838,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.08107613008592,6.34789175126439,1.90149421051854,0,0,0,0,0,0,0,11.4058573539325,7.56033254657468,9.46462326081219,0.285650984403804,0.662605622854841,2.69479758272899,2.39613677545591,0.919218786610021,0,0.127687338085188,0,2.2420668914133,2.28719109006024,3.12548022334056,0,0,0,1.76777151284201,1.56608848879013,2.42319279572891,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,1.00523481690292,0.347648640384553,0.511430914660661,0.41557608911912,0.486723789203273,0,0,0,0,0.130120442962704,0.229902104433473,0,0.150704817835715,0.136072998302656,0.384341160854549,0.281105173679186,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44066457330998,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0.252470927204373,0.315508219416257,1.17131623288992,0.861693590931196,0,0,0,0,0,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.643011105094777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0.755393897389701,0.675022500231806,0,0,0,0.103787347584177,1.99512436700516,1.02440163452481,0,1.04806581313991,0,0.222246727801615,0.618105171716683,0.320919209591815,0.505394423527595,0.25347929989024,0.565879024158229,0.280924522409647,0.192075457214608,0.17230640686684,0,0.463537303779422,0.192909220463705,0.412085900803307,0,0.685738504770831,0.70990322463735,0.476872379894642,0.581385666529314,0.0941093804153306,0.169229215783353,0.365855945745545,0.263069711437843,0.135804113845862,0,0.355905054372522,0.0985044823755635,0.818462086339379,0.154936841185966,0,0.749431733813838,0,0,0,0,0 | ||
|short_description=p1@ENSMUST00000153270,p1@uc009gaq.1 | |short_description=p1@ENSMUST00000153270,p1@uc009gaq.1 | ||
}} | }} |
Revision as of 13:48, 14 November 2012
Short description: | p1@ENSMUST00000153270, p1@uc009gaq.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000153270_5end, CAGE_peak_1_at_uc009gaq.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:100 |
Association with transcript: | 0bp_to_ENSMUST00000153270, uc009gaq.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.81e-37 | 23 |
neuroblast (sensu Vertebrata) | 5.81e-37 | 23 |
neuron | 8.04e-29 | 33 |
neuronal stem cell | 8.04e-29 | 33 |
neuroblast | 8.04e-29 | 33 |
electrically signaling cell | 8.04e-29 | 33 |
electrically responsive cell | 5.00e-24 | 39 |
electrically active cell | 5.00e-24 | 39 |
neural cell | 1.43e-21 | 43 |
ectodermal cell | 4.99e-21 | 44 |
neurectodermal cell | 4.99e-21 | 44 |
neuron of cerebral cortex | 1.01e-19 | 6 |
granule cell | 1.77e-14 | 3 |
striatum neuron | 2.97e-14 | 3 |
neuron of the ventral spinal cord | 8.23e-14 | 3 |
embryonic cell | 2.60e-12 | 70 |
somatic stem cell | 6.86e-09 | 91 |
multi fate stem cell | 6.86e-09 | 91 |
stem cell | 3.50e-08 | 97 |
hippocampal neuron | 4.88e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.