FFCP PHASE1:Mm9::chr6:60778883..60778894,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20617|HGNC=|MCL_coexpression_id=2|UniProt=O55042|association_with_transcript=95bp_to_ENSMUST00000114268,NM_001042451,uc009cdn.1,uc009cdp.1_5end|description=CAGE_peak_3_at_Snca_5end|id=chr6:60778883..60778894,-|ontology_enrichment_celltype=CL:0000117!1.24e-10!23;CL:0000337!1.24e-10!23;CL:0000540!6.31e-08!33;CL:0000047!6.31e-08!33;CL:0000031!6.31e-08!33;CL:0000404!6.31e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,6.62e-12,23;CL:0000337,6.62e-12,23;CL:0000540,6.53e-07,33;CL:0000047,6.53e-07,33;CL:0000031,6.53e-07,33;CL:0000404,6.53e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!6.18e-16!34;UBERON:0001049!5.84e-15!52;UBERON:0005068!5.84e-15!52;UBERON:0006241!5.84e-15!52;UBERON:0007135!5.84e-15!52;UBERON:0001017!1.00e-14!73;UBERON:0005743!1.00e-14!73;UBERON:0000955!1.46e-14!50;UBERON:0006238!1.46e-14!50;UBERON:0000073!2.00e-14!75;UBERON:0001016!2.00e-14!75;UBERON:0002616!5.56e-14!49;UBERON:0002791!8.41e-13!29;UBERON:0003528!8.41e-13!29;UBERON:0001893!8.41e-13!29;UBERON:0000025!5.08e-12!114;UBERON:0002346!1.02e-11!71;UBERON:0003075!1.02e-11!71;UBERON:0007284!1.02e-11!71;UBERON:0003080!3.41e-11!40;UBERON:0002780!8.76e-11!39;UBERON:0001890!8.76e-11!39;UBERON:0006240!8.76e-11!39;UBERON:0000033!1.90e-10!63;UBERON:0004121!6.21e-10!102;UBERON:0000924!6.21e-10!102;UBERON:0006601!6.21e-10!102;UBERON:0004111!1.19e-09!122;UBERON:0003056!2.61e-09!49;UBERON:0002021!5.54e-09!10;UBERON:0000411!5.54e-09!10;UBERON:0001950!5.54e-09!10;UBERON:0000956!1.05e-08!21;UBERON:0001869!1.05e-08!21;UBERON:0000203!1.05e-08!21;UBERON:0002619!3.68e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.88e-24,54;UBERON:0002020,2.68e-22,34;UBERON:0001049,5.09e-20,52;UBERON:0005068,5.09e-20,52;UBERON:0006241,5.09e-20,52;UBERON:0007135,5.09e-20,52;UBERON:0001017,4.20e-19,73;UBERON:0001016,2.86e-18,75;UBERON:0003528,7.09e-17,29;UBERON:0002791,7.09e-17,29;UBERON:0001893,7.09e-17,29;UBERON:0000955,1.18e-16,47;UBERON:0006238,1.18e-16,47;UBERON:0002616,9.93e-16,46;UBERON:0002021,3.56e-15,10;UBERON:0000411,3.56e-15,10;UBERON:0001950,3.56e-15,10;UBERON:0002346,2.36e-14,64;UBERON:0003075,2.36e-14,64;UBERON:0007284,2.36e-14,64;UBERON:0003080,4.96e-14,40;UBERON:0002780,2.40e-13,39;UBERON:0001890,2.40e-13,39;UBERON:0006240,2.40e-13,39;UBERON:0004121,6.04e-12,95;UBERON:0000924,6.04e-12,95;UBERON:0006601,6.04e-12,95;UBERON:0000025,1.95e-11,114;UBERON:0010371,2.22e-11,73;UBERON:0002619,4.57e-11,17;UBERON:0003056,4.11e-10,49;UBERON:0000956,6.75e-10,21;UBERON:0001869,6.75e-10,21;UBERON:0000203,6.75e-10,21;UBERON:0004111,7.00e-10,122;UBERON:0002420,8.54e-09,8;UBERON:0007245,8.54e-09,8;UBERON:0010009,8.54e-09,8;UBERON:0010011,8.54e-09,8;UBERON:0000454,8.54e-09,8;UBERON:0010314,2.20e-08,92;UBERON:0011216,1.26e-07,194;UBERON:0001948,4.75e-07,5;UBERON:0002315,4.75e-07,5;UBERON:0003076,7.56e-07,12;UBERON:0003057,7.56e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,5.3297561890506,6.07425802169478,6.99561878128147,0.157731082679119,0.411343300817216,0.84877930359606,1.78590909317247,0,0,0.159992422793407,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,1.01158230429799,1.5869729378161,1.90149421051854,0,0,0,0,0,0,0,0.103689612308478,0.675029691658453,0.420649922702764,5.71301968807607,7.73039893330647,0.367472397644862,0.766763768145891,0.919218786610021,5.50579404996943,7.2781782708557,6.14426133024974,1.05509030184155,1.9212405156506,1.56274011167028,2.23346399201105,5.6276261003168,8.40390362772456,5.59794312399969,5.69486723196412,2.05039390407831,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0.346970653532272,0.304465478312141,0.230615497256059,0.150722640552623,0.23517741427141,0.376999773989026,0,0.578397427679647,3.5384422077995,0.161766849947409,2.42925670306433,0.969750506270444,0,1.17112318804619,1.46612694769419,0,0,0,0,1.64769703345305,3.66000482254901,2.89005009859588,7.47444576826789,6.64860189058859,1.87009240103604,4.2182728397617,0.203678727700633,0.995255764880744,0,0,0,0.229902104433473,0.180062129805349,0.30140963567143,0.204109497453984,0.12811372028485,0.374806898238915,0,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0.207125772535502,0.234526059981096,0.720248245844059,0.23674473558521,0.196764231747404,0.154267112887378,0,0.268273401399619,0.233530684734339,0,0.32833492815819,0.729619285912702,0.877199924551994,1.09775057645525,2.01309628140558,7.14985825118033,2.57261530948211,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0.199141273254367,0.189667900953082,0,0,0,0,0.0701358198903186,0,0.147610147979602,0,0.123397163921801,0,1.83529616287703,1.57247196090562,3.59779379815766,3.04290182082754,3.13530307678142,2.29163266603278,2.87696137450811,0.972811360650212,0.274561413188081,0,0.744281895337007,0.312037673114561,0,0.1793974135219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| ||
|EntrezGene=20617 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=O55042 | |||
|association_with_transcript=95bp_to_ENSMUST00000114268,NM_001042451,uc009cdn.1,uc009cdp.1_5end | |||
|description=CAGE_peak_3_at_Snca_5end | |||
|id=chr6:60778883..60778894,- | |||
|ontology_enrichment_celltype=CL:0000117!1.24e-10!23;CL:0000337!1.24e-10!23;CL:0000540!6.31e-08!33;CL:0000047!6.31e-08!33;CL:0000031!6.31e-08!33;CL:0000404!6.31e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.62e-12,23;CL:0000337,6.62e-12,23;CL:0000540,6.53e-07,33;CL:0000047,6.53e-07,33;CL:0000031,6.53e-07,33;CL:0000404,6.53e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!6.18e-16!34;UBERON:0001049!5.84e-15!52;UBERON:0005068!5.84e-15!52;UBERON:0006241!5.84e-15!52;UBERON:0007135!5.84e-15!52;UBERON:0001017!1.00e-14!73;UBERON:0005743!1.00e-14!73;UBERON:0000955!1.46e-14!50;UBERON:0006238!1.46e-14!50;UBERON:0000073!2.00e-14!75;UBERON:0001016!2.00e-14!75;UBERON:0002616!5.56e-14!49;UBERON:0002791!8.41e-13!29;UBERON:0003528!8.41e-13!29;UBERON:0001893!8.41e-13!29;UBERON:0000025!5.08e-12!114;UBERON:0002346!1.02e-11!71;UBERON:0003075!1.02e-11!71;UBERON:0007284!1.02e-11!71;UBERON:0003080!3.41e-11!40;UBERON:0002780!8.76e-11!39;UBERON:0001890!8.76e-11!39;UBERON:0006240!8.76e-11!39;UBERON:0000033!1.90e-10!63;UBERON:0004121!6.21e-10!102;UBERON:0000924!6.21e-10!102;UBERON:0006601!6.21e-10!102;UBERON:0004111!1.19e-09!122;UBERON:0003056!2.61e-09!49;UBERON:0002021!5.54e-09!10;UBERON:0000411!5.54e-09!10;UBERON:0001950!5.54e-09!10;UBERON:0000956!1.05e-08!21;UBERON:0001869!1.05e-08!21;UBERON:0000203!1.05e-08!21;UBERON:0002619!3.68e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.88e-24,54;UBERON:0002020,2.68e-22,34;UBERON:0001049,5.09e-20,52;UBERON:0005068,5.09e-20,52;UBERON:0006241,5.09e-20,52;UBERON:0007135,5.09e-20,52;UBERON:0001017,4.20e-19,73;UBERON:0001016,2.86e-18,75;UBERON:0003528,7.09e-17,29;UBERON:0002791,7.09e-17,29;UBERON:0001893,7.09e-17,29;UBERON:0000955,1.18e-16,47;UBERON:0006238,1.18e-16,47;UBERON:0002616,9.93e-16,46;UBERON:0002021,3.56e-15,10;UBERON:0000411,3.56e-15,10;UBERON:0001950,3.56e-15,10;UBERON:0002346,2.36e-14,64;UBERON:0003075,2.36e-14,64;UBERON:0007284,2.36e-14,64;UBERON:0003080,4.96e-14,40;UBERON:0002780,2.40e-13,39;UBERON:0001890,2.40e-13,39;UBERON:0006240,2.40e-13,39;UBERON:0004121,6.04e-12,95;UBERON:0000924,6.04e-12,95;UBERON:0006601,6.04e-12,95;UBERON:0000025,1.95e-11,114;UBERON:0010371,2.22e-11,73;UBERON:0002619,4.57e-11,17;UBERON:0003056,4.11e-10,49;UBERON:0000956,6.75e-10,21;UBERON:0001869,6.75e-10,21;UBERON:0000203,6.75e-10,21;UBERON:0004111,7.00e-10,122;UBERON:0002420,8.54e-09,8;UBERON:0007245,8.54e-09,8;UBERON:0010009,8.54e-09,8;UBERON:0010011,8.54e-09,8;UBERON:0000454,8.54e-09,8;UBERON:0010314,2.20e-08,92;UBERON:0011216,1.26e-07,194;UBERON:0001948,4.75e-07,5;UBERON:0002315,4.75e-07,5;UBERON:0003076,7.56e-07,12;UBERON:0003057,7.56e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,5.3297561890506,6.07425802169478,6.99561878128147,0.157731082679119,0.411343300817216,0.84877930359606,1.78590909317247,0,0,0.159992422793407,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,1.01158230429799,1.5869729378161,1.90149421051854,0,0,0,0,0,0,0,0.103689612308478,0.675029691658453,0.420649922702764,5.71301968807607,7.73039893330647,0.367472397644862,0.766763768145891,0.919218786610021,5.50579404996943,7.2781782708557,6.14426133024974,1.05509030184155,1.9212405156506,1.56274011167028,2.23346399201105,5.6276261003168,8.40390362772456,5.59794312399969,5.69486723196412,2.05039390407831,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0.346970653532272,0.304465478312141,0.230615497256059,0.150722640552623,0.23517741427141,0.376999773989026,0,0.578397427679647,3.5384422077995,0.161766849947409,2.42925670306433,0.969750506270444,0,1.17112318804619,1.46612694769419,0,0,0,0,1.64769703345305,3.66000482254901,2.89005009859588,7.47444576826789,6.64860189058859,1.87009240103604,4.2182728397617,0.203678727700633,0.995255764880744,0,0,0,0.229902104433473,0.180062129805349,0.30140963567143,0.204109497453984,0.12811372028485,0.374806898238915,0,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0.207125772535502,0.234526059981096,0.720248245844059,0.23674473558521,0.196764231747404,0.154267112887378,0,0.268273401399619,0.233530684734339,0,0.32833492815819,0.729619285912702,0.877199924551994,1.09775057645525,2.01309628140558,7.14985825118033,2.57261530948211,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0.199141273254367,0.189667900953082,0,0,0,0,0.0701358198903186,0,0.147610147979602,0,0.123397163921801,0,1.83529616287703,1.57247196090562,3.59779379815766,3.04290182082754,3.13530307678142,2.29163266603278,2.87696137450811,0.972811360650212,0.274561413188081,0,0.744281895337007,0.312037673114561,0,0.179397413521912,0,0.184753190166605,0,0,0,0,0.167506257441816,0.238043640886014,0.975668239288994,0.630540576424764,0.44292937929755,0.478364305972461,2.13022309130459,1.89953480052485,2.16973587872267,0,0,0.491764273019036,0,1.44495530989013,2.57865710502847,0,0,0,0,0.215423397732799,0.238968797952552,0.222798674082394,0.566153061577665,0.404810701674894,0.584511715822624,0,4.81981974632711,0,0,0.325773918707152,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0,0.428674070063185,0,0.535106452806212,0.329098041204242,0,0,0.42366414172764,0,0,0,0.0603129249281559,0.119372344003136,0,0,0.18542530201051,3.2465467351592,0,1.11116716421827,5.27431679613135,2.59719032669948,6.17701067657611,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0,0.134864346384821,0.41326727862668,0,0,0,0,0.149516546043979,0,0.194451188344048,0,0,0,0.13020438484395,0,0,0,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0,0,0,0,12.4245405375755,13.3494318587081,16.6139698897425,16.3260523226503,12.3314853558716,11.3309084608455,12.8254275044043,12.6089936902782,7.25027854374727,14.497288729051,0.207574695168353,0,0.682934423016537,0.486213434136588,0.628839487883947,1.83843508450014,0.666740183404846,0.824140228955577,2.24643446714271,1.01078884705519,0,0.188626341386076,1.03005658216871,0.960377286073039,0.804096565378586,1.90517476513229,0.927074607558844,1.35036454324594,0.824171801606613,1.17759136107518,1.37147700954166,0.70990322463735,2.62279808942053,1.16277133305863,0.564656282491984,0.592302255241736,0.73171189149109,0.263069711437843,0.814824683075171,2.80571135828869,0.593175090620871,0.492522411877817,0.818462086339379,0.464810523557898,0.578719832943424,0.749431733813838,0.701794825336225,0.214871054048298,0.382576664137687,1.32354851471709,0.695603506861264 | |||
|short_description=p3@Snca | |||
}} |
Revision as of 10:25, 14 September 2013
Short description: | p3@Snca |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Snca_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 95bp_to_ENSMUST00000114268, NM_001042451, uc009cdn.1, uc009cdp.1_5end |
EntrezGene: | Snca |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.62e-12 | 23 |
neuroblast (sensu Vertebrata) | 6.62e-12 | 23 |
neuron | 6.53e-07 | 33 |
neuronal stem cell | 6.53e-07 | 33 |
neuroblast | 6.53e-07 | 33 |
electrically signaling cell | 6.53e-07 | 33 |
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