FFCP PHASE1:Mm9::chr2:28048527..28048548,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=56177|HGNC=|MCL_coexpression_id=13|UniProt=A3KGE4|association_with_transcript=15bp_to_ENSMUST00000113920,ENSMUST00000152415_5end|description=CAGE_peak_7_at_Olfm1_5end|id=chr2:28048527..28048548,+|ontology_enrichment_celltype=CL:0000117!3.38e-15!23;CL:0000337!3.38e-15!23;CL:0000540!4.18e-15!33;CL:0000047!4.18e-15!33;CL:0000031!4.18e-15!33;CL:0000404!4.18e-15!33;CL:0000221!5.63e-13!44;CL:0000133!5.63e-13!44;CL:0002319!1.45e-12!43;CL:0000393!2.93e-12!39;CL:0000211!2.93e-12!39;CL:0000055!5.27e-10!50|ontology_enrichment_celltype_v019_2=CL:0000117,4.92e-23,23;CL:0000337,4.92e-23,23;CL:0000540,2.03e-17,33;CL:0000047,2.03e-17,33;CL:0000031,2.03e-17,33;CL:0000404,2.03e-17,33;CL:0000393,1.91e-13,39;CL:0000211,1.91e-13,39;CL:0000221,4.93e-12,44;CL:0000133,4.93e-12,44;CL:0002319,1.92e-11,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.27e-32!71;UBERON:0003075!2.27e-32!71;UBERON:0007284!2.27e-32!71;UBERON:0004121!2.31e-32!102;UBERON:0000924!2.31e-32!102;UBERON:0006601!2.31e-32!102;UBERON:0000073!8.65e-31!75;UBERON:0001016!8.65e-31!75;UBERON:0001017!2.66e-30!73;UBERON:0005743!2.66e-30!73;UBERON:0000033!7.06e-29!63;UBERON:0001049!1.24e-26!52;UBERON:0005068!1.24e-26!52;UBERON:0006241!1.24e-26!52;UBERON:0007135!1.24e-26!52;UBERON:0003056!4.02e-25!49;UBERON:0000955!7.23e-25!50;UBERON:0006238!7.23e-25!50;UBERON:0002616!4.15e-24!49;UBERON:0003080!5.33e-21!40;UBERON:0002780!2.08e-20!39;UBERON:0001890!2.08e-20!39;UBERON:0006240!2.08e-20!39;UBERON:0002020!1.21e-19!34;UBERON:0002791!5.52e-16!29;UBERON:0003528!5.52e-16!29;UBERON:0001893!5.52e-16!29;UBERON:0007811!9.13e-14!86;UBERON:0000153!9.99e-13!94;UBERON:0000956!3.70e-11!21;UBERON:0001869!3.70e-11!21;UBERON:0000203!3.70e-11!21;UBERON:0002619!1.80e-09!17;UBERON:0002021!2.92e-07!10;UBERON:0000411!2.92e-07!10;UBERON:0001950!2.92e-07!10;UBERON:0004111!4.76e-07!122;UBERON:0000025!6.07e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.06e-45,64;UBERON:0003075,2.06e-45,64;UBERON:0007284,2.06e-45,64;UBERON:0000073,2.25e-41,54;UBERON:0001017,2.08e-39,73;UBERON:0010371,3.49e-39,73;UBERON:0001049,4.49e-39,52;UBERON:0005068,4.49e-39,52;UBERON:0006241,4.49e-39,52;UBERON:0007135,4.49e-39,52;UBERON:0004121,2.36e-38,95;UBERON:0000924,2.36e-38,95;UBERON:0006601,2.36e-38,95;UBERON:0001016,7.17e-38,75;UBERON:0003056,8.82e-36,49;UBERON:0000955,5.01e-33,47;UBERON:0006238,5.01e-33,47;UBERON:0002616,8.43e-32,46;UBERON:0003080,3.25e-30,40;UBERON:0002780,3.13e-29,39;UBERON:0001890,3.13e-29,39;UBERON:0006240,3.13e-29,39;UBERON:0002020,4.11e-29,34;UBERON:0010314,1.49e-28,92;UBERON:0003528,5.08e-23,29;UBERON:0002791,5.08e-23,29;UBERON:0001893,5.08e-23,29;UBERON:0000956,5.22e-15,21;UBERON:0001869,5.22e-15,21;UBERON:0000203,5.22e-15,21;UBERON:0002619,1.54e-13,17;UBERON:0002021,3.08e-11,10;UBERON:0000411,3.08e-11,10;UBERON:0001950,3.08e-11,10;UBERON:0000025,7.33e-10,114;UBERON:0002420,2.62e-09,8;UBERON:0007245,2.62e-09,8;UBERON:0010009,2.62e-09,8;UBERON:0010011,2.62e-09,8;UBERON:0000454,2.62e-09,8;UBERON:0004111,5.81e-09,122;UBERON:0003076,7.03e-09,12;UBERON:0003057,7.03e-09,12;UBERON:0002240,4.01e-08,6;UBERON:0005174,4.01e-08,6;UBERON:0001137,4.01e-08,6;UBERON:0001948,2.25e-07,5;UBERON:0002315,2.25e-07,5;UBERON:0001894,4.83e-07,10;UBERON:0006222,4.83e-07,10|phase1_expression=0.80074423552397,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0.782391344348039,0,0.219686182734472,0.388859798148567,0.279972843250725,0,0,0,0,0.257259436035947,0.286533439938757,0,8.09265843438391,14.8117474196169,5.70448263155561,0.338844532069132,0,0,0.988866362566974,0,0,0.384218305321555,1.55534418462716,0.945041568321835,2.3135745748652,5.42736870367227,9.49734726091938,2.9397791811589,3.06705507258356,9.19218786610021,2.20231761998777,6.2566795661742,4.45458946443106,15.4306956644327,13.4486836095542,11.9810075228055,1.95428099300967,6.19038871034848,4.5839474333043,10.3120004915784,7.83044244395066,9.31997229126503,0.757261933331841,0.906858721281426,0,0,0,0,0,0,0.280888840263504,0,0,0,1.69012103732017,0,0,0,0,0,0,0,0.517875767294343,0.445326417194474,0.173485326766136,0.608930956624282,0.461230994512117,0.452167921657868,1.41106448562846,0.502666365318702,0,0.144599356919912,0,0.161766849947409,0.441683036920787,0,0,3.80615036115011,3.14170060220183,0,0,0,0,3.59497534571574,1.37250180845588,3.26701315493447,7.99591872884472,6.13717097592793,5.194701113989,6.16516799657479,0.509196819251581,0,0,0.841767423545896,1.04096354370163,1.14951052216736,2.88099407688559,2.86339153887859,3.81004395247436,4.22775276940004,3.74806898238915,1.29351685369508,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0.348252166522167,0.205782136407943,0.796137067273973,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0.329119699826961,0.164167464079095,0,0,0,0,5.04695876553905,3.2929475961371,0,0,0.426576501070468,0.928946687441754,0.38660238396628,0.201683524623343,0.444756087689741,0,0,0,0,0.596869416123452,0,0,0,0.398282546508734,0,0.342745537829186,0,0.610953983535943,0,0.140271639780637,0.126473074248515,0,0.31399745568275,0,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0.287696137450811,0,0,0,0.372140947668503,0,0.252578877947112,0,0,0.739012760666419,0.189491411770485,0,0,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,0.157635144106191,0.664394068946325,0.797273843287435,0,0.518054945597687,0.289298117163023,0,0,0,0,2.40825884981688,2.10981035865966,0,0.252470927204373,1.26203287766503,1.17131623288992,0.861693590931196,0,0.445597348164788,0.566153061577665,0.809621403349789,1.16902343164525,0.395287777946524,7.06906896127976,0,0.534196811001766,0.325773918707152,0.659880491890142,0,0,0.302323556964751,0.377210159511796,0,0,0,0,0,0,0,0,1.36175842301515,1.44048875225048,0.776152102696527,1.71469628025274,1.24138163549592,2.85390108163313,2.30368628842969,2.43571959291679,0.469343416127421,0,0.220528398054962,0.16488625294148,0.807322133479528,0.241251699712623,0,0.164140899745061,0,2.78137953015765,0,0,0,0,0.27338845544205,0,0.339956859987711,0.139951452323658,0,0,0.474503990371703,0.203319467126849,0.108005340821801,0.209088296014469,0,0.404593039154462,0.0826534557253359,0,0,0,0,0.299033092087958,0,0.194451188344048,0,0.168956125490778,0,0.13020438484395,0.104859344425711,0,0,0.316011120628178,0,0.205421914329655,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0.0897138566094757,0.335769232728157,0.19318959403219,2.064507229963,0,0,0.501572104035363,3.95326289831947,2.76195141904306,6.30185064783336,4.64003592327956,4.7955776383945,6.0431511791176,2.70009000092722,4.95353323546643,5.43770890781046,6.21312374102184,0.62272408550506,1.59609949360412,1.53660245178721,1.45864030240976,0.628839487883947,1.10306105070008,0.44449345560323,0.618105171716683,0.962757628775446,0.758091635291392,1.01391719956096,0.943131706930381,1.12369808963859,1.15245274328765,1.32101578597911,0.952587382566147,0.927074607558844,1.15745532278223,0.824171801606613,0.441596760403192,1.37147700954166,0.354951612318675,0.715308569841963,0.872078499793971,1.31753132581463,0.676916863133412,1.64635175585495,1.57841826862706,2.03706170768793,1.12228454331548,0.949080144993393,1.0835493061312,0.818462086339379,1.70430525304563,0.578719832943424,2.49810577937946,0.935726433781634,0.429742108096597,1.14772999241306,0.661774257358546,0.231867835620421|short_description=p7@Olfm1}} | ||
|EntrezGene=56177 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt=A3KGE4 | |||
|association_with_transcript=15bp_to_ENSMUST00000113920,ENSMUST00000152415_5end | |||
|description=CAGE_peak_7_at_Olfm1_5end | |||
|id=chr2:28048527..28048548,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.38e-15!23;CL:0000337!3.38e-15!23;CL:0000540!4.18e-15!33;CL:0000047!4.18e-15!33;CL:0000031!4.18e-15!33;CL:0000404!4.18e-15!33;CL:0000221!5.63e-13!44;CL:0000133!5.63e-13!44;CL:0002319!1.45e-12!43;CL:0000393!2.93e-12!39;CL:0000211!2.93e-12!39;CL:0000055!5.27e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.92e-23,23;CL:0000337,4.92e-23,23;CL:0000540,2.03e-17,33;CL:0000047,2.03e-17,33;CL:0000031,2.03e-17,33;CL:0000404,2.03e-17,33;CL:0000393,1.91e-13,39;CL:0000211,1.91e-13,39;CL:0000221,4.93e-12,44;CL:0000133,4.93e-12,44;CL:0002319,1.92e-11,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.27e-32!71;UBERON:0003075!2.27e-32!71;UBERON:0007284!2.27e-32!71;UBERON:0004121!2.31e-32!102;UBERON:0000924!2.31e-32!102;UBERON:0006601!2.31e-32!102;UBERON:0000073!8.65e-31!75;UBERON:0001016!8.65e-31!75;UBERON:0001017!2.66e-30!73;UBERON:0005743!2.66e-30!73;UBERON:0000033!7.06e-29!63;UBERON:0001049!1.24e-26!52;UBERON:0005068!1.24e-26!52;UBERON:0006241!1.24e-26!52;UBERON:0007135!1.24e-26!52;UBERON:0003056!4.02e-25!49;UBERON:0000955!7.23e-25!50;UBERON:0006238!7.23e-25!50;UBERON:0002616!4.15e-24!49;UBERON:0003080!5.33e-21!40;UBERON:0002780!2.08e-20!39;UBERON:0001890!2.08e-20!39;UBERON:0006240!2.08e-20!39;UBERON:0002020!1.21e-19!34;UBERON:0002791!5.52e-16!29;UBERON:0003528!5.52e-16!29;UBERON:0001893!5.52e-16!29;UBERON:0007811!9.13e-14!86;UBERON:0000153!9.99e-13!94;UBERON:0000956!3.70e-11!21;UBERON:0001869!3.70e-11!21;UBERON:0000203!3.70e-11!21;UBERON:0002619!1.80e-09!17;UBERON:0002021!2.92e-07!10;UBERON:0000411!2.92e-07!10;UBERON:0001950!2.92e-07!10;UBERON:0004111!4.76e-07!122;UBERON:0000025!6.07e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.06e-45,64;UBERON:0003075,2.06e-45,64;UBERON:0007284,2.06e-45,64;UBERON:0000073,2.25e-41,54;UBERON:0001017,2.08e-39,73;UBERON:0010371,3.49e-39,73;UBERON:0001049,4.49e-39,52;UBERON:0005068,4.49e-39,52;UBERON:0006241,4.49e-39,52;UBERON:0007135,4.49e-39,52;UBERON:0004121,2.36e-38,95;UBERON:0000924,2.36e-38,95;UBERON:0006601,2.36e-38,95;UBERON:0001016,7.17e-38,75;UBERON:0003056,8.82e-36,49;UBERON:0000955,5.01e-33,47;UBERON:0006238,5.01e-33,47;UBERON:0002616,8.43e-32,46;UBERON:0003080,3.25e-30,40;UBERON:0002780,3.13e-29,39;UBERON:0001890,3.13e-29,39;UBERON:0006240,3.13e-29,39;UBERON:0002020,4.11e-29,34;UBERON:0010314,1.49e-28,92;UBERON:0003528,5.08e-23,29;UBERON:0002791,5.08e-23,29;UBERON:0001893,5.08e-23,29;UBERON:0000956,5.22e-15,21;UBERON:0001869,5.22e-15,21;UBERON:0000203,5.22e-15,21;UBERON:0002619,1.54e-13,17;UBERON:0002021,3.08e-11,10;UBERON:0000411,3.08e-11,10;UBERON:0001950,3.08e-11,10;UBERON:0000025,7.33e-10,114;UBERON:0002420,2.62e-09,8;UBERON:0007245,2.62e-09,8;UBERON:0010009,2.62e-09,8;UBERON:0010011,2.62e-09,8;UBERON:0000454,2.62e-09,8;UBERON:0004111,5.81e-09,122;UBERON:0003076,7.03e-09,12;UBERON:0003057,7.03e-09,12;UBERON:0002240,4.01e-08,6;UBERON:0005174,4.01e-08,6;UBERON:0001137,4.01e-08,6;UBERON:0001948,2.25e-07,5;UBERON:0002315,2.25e-07,5;UBERON:0001894,4.83e-07,10;UBERON:0006222,4.83e-07,10 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0.782391344348039,0,0.219686182734472,0.388859798148567,0.279972843250725,0,0,0,0,0.257259436035947,0.286533439938757,0,8.09265843438391,14.8117474196169,5.70448263155561,0.338844532069132,0,0,0.988866362566974,0,0,0.384218305321555,1.55534418462716,0.945041568321835,2.3135745748652,5.42736870367227,9.49734726091938,2.9397791811589,3.06705507258356,9.19218786610021,2.20231761998777,6.2566795661742,4.45458946443106,15.4306956644327,13.4486836095542,11.9810075228055,1.95428099300967,6.19038871034848,4.5839474333043,10.3120004915784,7.83044244395066,9.31997229126503,0.757261933331841,0.906858721281426,0,0,0,0,0,0,0.280888840263504,0,0,0,1.69012103732017,0,0,0,0,0,0,0,0.517875767294343,0.445326417194474,0.173485326766136,0.608930956624282,0.461230994512117,0.452167921657868,1.41106448562846,0.502666365318702,0,0.144599356919912,0,0.161766849947409,0.441683036920787,0,0,3.80615036115011,3.14170060220183,0,0,0,0,3.59497534571574,1.37250180845588,3.26701315493447,7.99591872884472,6.13717097592793,5.194701113989,6.16516799657479,0.509196819251581,0,0,0.841767423545896,1.04096354370163,1.14951052216736,2.88099407688559,2.86339153887859,3.81004395247436,4.22775276940004,3.74806898238915,1.29351685369508,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0.348252166522167,0.205782136407943,0.796137067273973,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0.329119699826961,0.164167464079095,0,0,0,0,5.04695876553905,3.2929475961371,0,0,0.426576501070468,0.928946687441754,0.38660238396628,0.201683524623343,0.444756087689741,0,0,0,0,0.596869416123452,0,0,0,0.398282546508734,0,0.342745537829186,0,0.610953983535943,0,0.140271639780637,0.126473074248515,0,0.31399745568275,0,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0.287696137450811,0,0,0,0.372140947668503,0,0.252578877947112,0,0,0.739012760666419,0.189491411770485,0,0,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,0.157635144106191,0.664394068946325,0.797273843287435,0,0.518054945597687,0.289298117163023,0,0,0,0,2.40825884981688,2.10981035865966,0,0.252470927204373,1.26203287766503,1.17131623288992,0.861693590931196,0,0.445597348164788,0.566153061577665,0.809621403349789,1.16902343164525,0.395287777946524,7.06906896127976,0,0.534196811001766,0.325773918707152,0.659880491890142,0,0,0.302323556964751,0.377210159511796,0,0,0,0,0,0,0,0,1.36175842301515,1.44048875225048,0.776152102696527,1.71469628025274,1.24138163549592,2.85390108163313,2.30368628842969,2.43571959291679,0.469343416127421,0,0.220528398054962,0.16488625294148,0.807322133479528,0.241251699712623,0,0.164140899745061,0,2.78137953015765,0,0,0,0,0.27338845544205,0,0.339956859987711,0.139951452323658,0,0,0.474503990371703,0.203319467126849,0.108005340821801,0.209088296014469,0,0.404593039154462,0.0826534557253359,0,0,0,0,0.299033092087958,0,0.194451188344048,0,0.168956125490778,0,0.13020438484395,0.104859344425711,0,0,0.316011120628178,0,0.205421914329655,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0.0897138566094757,0.335769232728157,0.19318959403219,2.064507229963,0,0,0.501572104035363,3.95326289831947,2.76195141904306,6.30185064783336,4.64003592327956,4.7955776383945,6.0431511791176,2.70009000092722,4.95353323546643,5.43770890781046,6.21312374102184,0.62272408550506,1.59609949360412,1.53660245178721,1.45864030240976,0.628839487883947,1.10306105070008,0.44449345560323,0.618105171716683,0.962757628775446,0.758091635291392,1.01391719956096,0.943131706930381,1.12369808963859,1.15245274328765,1.32101578597911,0.952587382566147,0.927074607558844,1.15745532278223,0.824171801606613,0.441596760403192,1.37147700954166,0.354951612318675,0.715308569841963,0.872078499793971,1.31753132581463,0.676916863133412,1.64635175585495,1.57841826862706,2.03706170768793,1.12228454331548,0.949080144993393,1.0835493061312,0.818462086339379,1.70430525304563,0.578719832943424,2.49810577937946,0.935726433781634,0.429742108096597,1.14772999241306,0.661774257358546,0.231867835620421 | |||
|short_description=p7@Olfm1 | |||
}} |
Revision as of 23:35, 13 September 2013
Short description: | p7@Olfm1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Olfm1_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 15bp_to_ENSMUST00000113920, ENSMUST00000152415_5end |
EntrezGene: | Olfm1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.92e-23 | 23 |
neuroblast (sensu Vertebrata) | 4.92e-23 | 23 |
neuron | 2.03e-17 | 33 |
neuronal stem cell | 2.03e-17 | 33 |
neuroblast | 2.03e-17 | 33 |
electrically signaling cell | 2.03e-17 | 33 |
electrically responsive cell | 1.91e-13 | 39 |
electrically active cell | 1.91e-13 | 39 |
ectodermal cell | 4.93e-12 | 44 |
neurectodermal cell | 4.93e-12 | 44 |
neural cell | 1.92e-11 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.