FFCP PHASE1:Mm9::chr17:35374840..35374863,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=168|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:35374840..35374863,+|id=chr17:35374840..35374863,+|ontology_enrichment_celltype=CL:0000117!1.02e-08!23;CL:0000337!1.02e-08!23|ontology_enrichment_celltype_v019_2=CL:0002610,2.57e-11,3;CL:0002614,6.64e-11,3;CL:0000117,2.26e-08,23;CL:0000337,2.26e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.69e-22!73;UBERON:0005743!2.69e-22!73;UBERON:0000073!2.67e-21!75;UBERON:0001016!2.67e-21!75;UBERON:0000955!1.07e-19!50;UBERON:0006238!1.07e-19!50;UBERON:0001049!1.46e-19!52;UBERON:0005068!1.46e-19!52;UBERON:0006241!1.46e-19!52;UBERON:0007135!1.46e-19!52;UBERON:0002616!1.01e-18!49;UBERON:0002020!2.87e-17!34;UBERON:0000033!3.81e-17!63;UBERON:0004121!8.90e-16!102;UBERON:0000924!8.90e-16!102;UBERON:0006601!8.90e-16!102;UBERON:0002346!1.21e-14!71;UBERON:0003075!1.21e-14!71;UBERON:0007284!1.21e-14!71;UBERON:0002791!1.85e-14!29;UBERON:0003528!1.85e-14!29;UBERON:0001893!1.85e-14!29;UBERON:0002021!1.17e-12!10;UBERON:0000411!1.17e-12!10;UBERON:0001950!1.17e-12!10;UBERON:0003080!3.14e-12!40;UBERON:0003056!5.39e-12!49;UBERON:0002780!2.07e-11!39;UBERON:0001890!2.07e-11!39;UBERON:0006240!2.07e-11!39;UBERON:0007811!2.10e-11!86;UBERON:0000956!1.75e-10!21;UBERON:0001869!1.75e-10!21;UBERON:0000203!1.75e-10!21;UBERON:0002619!2.44e-10!17;UBERON:0000153!2.03e-09!94;UBERON:0003076!1.19e-08!12;UBERON:0003057!1.19e-08!12;UBERON:0002298!9.82e-08!6;UBERON:0000025!4.92e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.73e-33,54;UBERON:0001049,1.63e-28,52;UBERON:0005068,1.63e-28,52;UBERON:0006241,1.63e-28,52;UBERON:0007135,1.63e-28,52;UBERON:0001017,3.04e-28,73;UBERON:0002021,8.03e-28,10;UBERON:0000411,8.03e-28,10;UBERON:0001950,8.03e-28,10;UBERON:0001016,2.22e-27,75;UBERON:0000955,3.17e-26,47;UBERON:0006238,3.17e-26,47;UBERON:0002616,4.45e-24,46;UBERON:0002020,2.22e-23,34;UBERON:0002346,1.99e-22,64;UBERON:0003075,1.99e-22,64;UBERON:0007284,1.99e-22,64;UBERON:0003080,4.25e-22,40;UBERON:0003528,1.93e-21,29;UBERON:0002791,1.93e-21,29;UBERON:0001893,1.93e-21,29;UBERON:0004121,9.73e-21,95;UBERON:0000924,9.73e-21,95;UBERON:0006601,9.73e-21,95;UBERON:0002780,4.43e-20,39;UBERON:0001890,4.43e-20,39;UBERON:0006240,4.43e-20,39;UBERON:0002619,1.48e-19,17;UBERON:0010371,3.60e-19,73;UBERON:0000956,8.30e-19,21;UBERON:0001869,8.30e-19,21;UBERON:0000203,8.30e-19,21;UBERON:0003056,1.97e-17,49;UBERON:0010314,2.24e-14,92;UBERON:0002950,9.42e-14,4;UBERON:0001891,9.42e-14,4;UBERON:0009616,9.42e-14,4;UBERON:0010286,9.42e-14,4;UBERON:0004684,2.57e-11,3;UBERON:0002275,2.57e-11,3;UBERON:0002038,6.64e-11,3;UBERON:0009663,6.64e-11,3;UBERON:0009661,6.64e-11,3;UBERON:0000125,6.64e-11,3;UBERON:0002308,6.64e-11,3;UBERON:0000025,8.27e-11,114;UBERON:0004111,7.91e-10,122;UBERON:0011216,6.46e-08,194;UBERON:0003076,7.09e-07,12;UBERON:0003057,7.09e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0.137114433605739,0,0.850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,0.218025156380447,0,0,0,0,0.167782606057736,0,0.336093799142464,0,0,0,0.809265843438391,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0.270011876663381,0,0,1.32521124570968,0,0.287536413054709,0,2.20231761998777,2.93680877595932,2.15049146558741,0,0.640413505216868,0,3.07101298901519,1.68828783009504,1.83357897332172,0.883885756421003,1.56608848879013,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,10.2628886338593,0.255457055208591,0,0,0,1.64769703345305,0.915001205637253,0.502617408451458,2.25971616249959,0.511430914660661,2.0778804455956,1.1356888414743,0,0,0,0,0,0,0.180062129805349,0,0.0680364991513279,0,0.0937017245597288,0.776110112217047,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0.134206418760372,2.73376933133365,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0.486405680325106,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0.275936746304732,0.642202359951168,1.87538698547525,0,0,0,0,0,0.238968797952552,0,0,0,0.876767573733936,0,1.92792789853084,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,2.03967832211561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0.233753804363138,0,0,0,0,0,0,0.183151624267265,0,0,2.82375921308533,0.460325236507177,1.71868654031819,4.46818274093588,1.37016503954128,2.2661816921691,2.70009000092722,3.15224842256954,2.26571204492102,4.14208249401456,0.103787347584177,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.187283014939765,0.192075457214608,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0.09410938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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=168 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:35374840..35374863,+ | |||
|id=chr17:35374840..35374863,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.02e-08!23;CL:0000337!1.02e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,2.57e-11,3;CL:0002614,6.64e-11,3;CL:0000117,2.26e-08,23;CL:0000337,2.26e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.69e-22!73;UBERON:0005743!2.69e-22!73;UBERON:0000073!2.67e-21!75;UBERON:0001016!2.67e-21!75;UBERON:0000955!1.07e-19!50;UBERON:0006238!1.07e-19!50;UBERON:0001049!1.46e-19!52;UBERON:0005068!1.46e-19!52;UBERON:0006241!1.46e-19!52;UBERON:0007135!1.46e-19!52;UBERON:0002616!1.01e-18!49;UBERON:0002020!2.87e-17!34;UBERON:0000033!3.81e-17!63;UBERON:0004121!8.90e-16!102;UBERON:0000924!8.90e-16!102;UBERON:0006601!8.90e-16!102;UBERON:0002346!1.21e-14!71;UBERON:0003075!1.21e-14!71;UBERON:0007284!1.21e-14!71;UBERON:0002791!1.85e-14!29;UBERON:0003528!1.85e-14!29;UBERON:0001893!1.85e-14!29;UBERON:0002021!1.17e-12!10;UBERON:0000411!1.17e-12!10;UBERON:0001950!1.17e-12!10;UBERON:0003080!3.14e-12!40;UBERON:0003056!5.39e-12!49;UBERON:0002780!2.07e-11!39;UBERON:0001890!2.07e-11!39;UBERON:0006240!2.07e-11!39;UBERON:0007811!2.10e-11!86;UBERON:0000956!1.75e-10!21;UBERON:0001869!1.75e-10!21;UBERON:0000203!1.75e-10!21;UBERON:0002619!2.44e-10!17;UBERON:0000153!2.03e-09!94;UBERON:0003076!1.19e-08!12;UBERON:0003057!1.19e-08!12;UBERON:0002298!9.82e-08!6;UBERON:0000025!4.92e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.73e-33,54;UBERON:0001049,1.63e-28,52;UBERON:0005068,1.63e-28,52;UBERON:0006241,1.63e-28,52;UBERON:0007135,1.63e-28,52;UBERON:0001017,3.04e-28,73;UBERON:0002021,8.03e-28,10;UBERON:0000411,8.03e-28,10;UBERON:0001950,8.03e-28,10;UBERON:0001016,2.22e-27,75;UBERON:0000955,3.17e-26,47;UBERON:0006238,3.17e-26,47;UBERON:0002616,4.45e-24,46;UBERON:0002020,2.22e-23,34;UBERON:0002346,1.99e-22,64;UBERON:0003075,1.99e-22,64;UBERON:0007284,1.99e-22,64;UBERON:0003080,4.25e-22,40;UBERON:0003528,1.93e-21,29;UBERON:0002791,1.93e-21,29;UBERON:0001893,1.93e-21,29;UBERON:0004121,9.73e-21,95;UBERON:0000924,9.73e-21,95;UBERON:0006601,9.73e-21,95;UBERON:0002780,4.43e-20,39;UBERON:0001890,4.43e-20,39;UBERON:0006240,4.43e-20,39;UBERON:0002619,1.48e-19,17;UBERON:0010371,3.60e-19,73;UBERON:0000956,8.30e-19,21;UBERON:0001869,8.30e-19,21;UBERON:0000203,8.30e-19,21;UBERON:0003056,1.97e-17,49;UBERON:0010314,2.24e-14,92;UBERON:0002950,9.42e-14,4;UBERON:0001891,9.42e-14,4;UBERON:0009616,9.42e-14,4;UBERON:0010286,9.42e-14,4;UBERON:0004684,2.57e-11,3;UBERON:0002275,2.57e-11,3;UBERON:0002038,6.64e-11,3;UBERON:0009663,6.64e-11,3;UBERON:0009661,6.64e-11,3;UBERON:0000125,6.64e-11,3;UBERON:0002308,6.64e-11,3;UBERON:0000025,8.27e-11,114;UBERON:0004111,7.91e-10,122;UBERON:0011216,6.46e-08,194;UBERON:0003076,7.09e-07,12;UBERON:0003057,7.09e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0.137114433605739,0,0.850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,0.218025156380447,0,0,0,0,0.167782606057736,0,0.336093799142464,0,0,0,0.809265843438391,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0.270011876663381,0,0,1.32521124570968,0,0.287536413054709,0,2.20231761998777,2.93680877595932,2.15049146558741,0,0.640413505216868,0,3.07101298901519,1.68828783009504,1.83357897332172,0.883885756421003,1.56608848879013,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,10.2628886338593,0.255457055208591,0,0,0,1.64769703345305,0.915001205637253,0.502617408451458,2.25971616249959,0.511430914660661,2.0778804455956,1.1356888414743,0,0,0,0,0,0,0.180062129805349,0,0.0680364991513279,0,0.0937017245597288,0.776110112217047,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0.134206418760372,2.73376933133365,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0.486405680325106,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0.275936746304732,0.642202359951168,1.87538698547525,0,0,0,0,0,0.238968797952552,0,0,0,0.876767573733936,0,1.92792789853084,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,2.03967832211561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0.233753804363138,0,0,0,0,0,0,0.183151624267265,0,0,2.82375921308533,0.460325236507177,1.71868654031819,4.46818274093588,1.37016503954128,2.2661816921691,2.70009000092722,3.15224842256954,2.26571204492102,4.14208249401456,0.103787347584177,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.187283014939765,0.192075457214608,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0.191288332068843,0,0.463735671240843 | |||
|short_description=p@chr17:35374840..35374863,+ | |||
}} |
Revision as of 14:23, 13 September 2013
Short description: | p@chr17:35374840..35374863, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:35374840..35374863, + |
Coexpression cluster: | MCL_coexpression_mm9:168 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 2.57e-11 | 3 |
neuron of the substantia nigra | 6.64e-11 | 3 |
CNS neuron (sensu Vertebrata) | 2.26e-08 | 23 |
neuroblast (sensu Vertebrata) | 2.26e-08 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.