FFCP PHASE1:Mm9::chr7:94734982..94735000,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=108071|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=-20bp_to_uc009ifq.1_5end|description=CAGE_peak_4_at_Grm5_5end|id=chr7:94734982..94735000,+|ontology_enrichment_celltype=CL:0000117!1.07e-16!23;CL:0000337!1.07e-16!23;CL:0000540!1.11e-09!33;CL:0000047!1.11e-09!33;CL:0000031!1.11e-09!33;CL:0000404!1.11e-09!33;CL:0000393!2.76e-07!39;CL:0000211!2.76e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,7.41e-12,23;CL:0000337,7.41e-12,23;CL:0002612,2.20e-08,3;CL:0002610,1.25e-07,3;CL:0000540,1.63e-07,33;CL:0000047,1.63e-07,33;CL:0000031,1.63e-07,33;CL:0000404,1.63e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.12e-35!52;UBERON:0005068!1.12e-35!52;UBERON:0006241!1.12e-35!52;UBERON:0007135!1.12e-35!52;UBERON:0000955!2.99e-33!50;UBERON:0006238!2.99e-33!50;UBERON:0002616!4.27e-32!49;UBERON:0001017!2.33e-31!73;UBERON:0005743!2.33e-31!73;UBERON:0000073!4.51e-30!75;UBERON:0001016!4.51e-30!75;UBERON:0002020!5.35e-28!34;UBERON:0003080!3.05e-27!40;UBERON:0002780!4.14e-26!39;UBERON:0001890!4.14e-26!39;UBERON:0006240!4.14e-26!39;UBERON:0000033!6.74e-26!63;UBERON:0002346!2.06e-24!71;UBERON:0003075!2.06e-24!71;UBERON:0007284!2.06e-24!71;UBERON:0003056!1.29e-22!49;UBERON:0002791!2.55e-22!29;UBERON:0003528!2.55e-22!29;UBERON:0001893!2.55e-22!29;UBERON:0004121!1.57e-19!102;UBERON:0000924!1.57e-19!102;UBERON:0006601!1.57e-19!102;UBERON:0000956!3.11e-15!21;UBERON:0001869!3.11e-15!21;UBERON:0000203!3.11e-15!21;UBERON:0007811!3.53e-15!86;UBERON:0002021!6.99e-13!10;UBERON:0000411!6.99e-13!10;UBERON:0001950!6.99e-13!10;UBERON:0000153!9.68e-13!94;UBERON:0002619!1.74e-12!17;UBERON:0000025!1.13e-08!114;UBERON:0003076!1.45e-08!12;UBERON:0003057!1.45e-08!12;UBERON:0002420!2.79e-08!8;UBERON:0007245!2.79e-08!8;UBERON:0010009!2.79e-08!8;UBERON:0010011!2.79e-08!8;UBERON:0000454!2.79e-08!8;UBERON:0002240!6.22e-08!6;UBERON:0005174!6.22e-08!6;UBERON:0001137!6.22e-08!6;UBERON:0004111!2.61e-07!122;UBERON:0002298!4.62e-07!6;UBERON:0001948!6.19e-07!5;UBERON:0002315!6.19e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.04e-39,54;UBERON:0001049,1.29e-35,52;UBERON:0005068,1.29e-35,52;UBERON:0006241,1.29e-35,52;UBERON:0007135,1.29e-35,52;UBERON:0001017,1.58e-33,73;UBERON:0002020,6.24e-33,34;UBERON:0001016,1.94e-32,75;UBERON:0002346,1.16e-27,64;UBERON:0003075,1.16e-27,64;UBERON:0007284,1.16e-27,64;UBERON:0000955,1.43e-26,47;UBERON:0006238,1.43e-26,47;UBERON:0002616,7.16e-25,46;UBERON:0003080,2.07e-24,40;UBERON:0004121,4.58e-24,95;UBERON:0000924,4.58e-24,95;UBERON:0006601,4.58e-24,95;UBERON:0002021,1.16e-23,10;UBERON:0000411,1.16e-23,10;UBERON:0001950,1.16e-23,10;UBERON:0010371,2.06e-23,73;UBERON:0003528,2.94e-23,29;UBERON:0002791,2.94e-23,29;UBERON:0001893,2.94e-23,29;UBERON:0002780,1.13e-22,39;UBERON:0001890,1.13e-22,39;UBERON:0006240,1.13e-22,39;UBERON:0002619,5.72e-19,17;UBERON:0003056,6.06e-19,49;UBERON:0000956,9.68e-18,21;UBERON:0001869,9.68e-18,21;UBERON:0000203,9.68e-18,21;UBERON:0010314,3.62e-17,92;UBERON:0002240,5.36e-14,6;UBERON:0005174,5.36e-14,6;UBERON:0001137,5.36e-14,6;UBERON:0000025,1.55e-12,114;UBERON:0001948,4.65e-12,5;UBERON:0002315,4.65e-12,5;UBERON:0003076,1.89e-11,12;UBERON:0003057,1.89e-11,12;UBERON:0004111,2.87e-11,122;UBERON:0002257,2.20e-08,3;UBERON:0011216,5.95e-08,194;UBERON:0004684,1.25e-07,3;UBERON:0002275,1.25e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,1.01158230429799,0,0.633831403506179,0,0,0,0,0,0,0,0.414758449233911,0.270011876663381,0.210324961351382,1.14260393761521,2.87129103237098,0.489963196859816,0.479227355091182,0,2.20231761998777,4.08599481872601,3.07213066512487,0.659431438650969,1.28082701043374,0.52091337055676,0.558365998002762,1.12552522006336,1.83357897332172,5.59794312399969,5.83723891276322,4.10078780815661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,3.74476598512057,3.20250421973039,2.63874139437015,8.8650403298061,4.60287823194595,4.77912502486988,3.73154905055843,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.62188789112922,2.05809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56880943980467,2.81308047821288,0,0,0,0,0,0,0,0,0,0,0,3.21321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0,0.214337035031592,0.354680467284547,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.21227026878773,1.38097570952153,1.14579102687879,6.01486138202907,7.53590771747707,6.7985450765073,6.07520250208625,4.5032120322422,4.07828168085784,5.1776031175182,0,0,0,0.243106717068294,0,0.183843508450014,0,0.412070114477788,0,0.505394423527595,0.50695859978048,0.377252682772152,0.655490552289177,0.832326981263301,0.574354689556133,1.42888107384922,0.579421629724277,0.77163688185482,0.824171801606613,0.441596760403192,1.02860775715625,0.70990322463735,0,1.0174249164263,0.376437521661322,0.676916863133412,0.73171189149109,0.526139422875686,0.679020569229309,0,0.711810108745045,0.788035859004508,0.409231043169689,0.309873682371932,0.578719832943424,0,0.701794825336225,0.644613162144895,0,0.220591419119515,0|short_description=p4@Grm5}} | ||
|EntrezGene=108071 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt= | |||
|association_with_transcript=-20bp_to_uc009ifq.1_5end | |||
|description=CAGE_peak_4_at_Grm5_5end | |||
|id=chr7:94734982..94735000,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.07e-16!23;CL:0000337!1.07e-16!23;CL:0000540!1.11e-09!33;CL:0000047!1.11e-09!33;CL:0000031!1.11e-09!33;CL:0000404!1.11e-09!33;CL:0000393!2.76e-07!39;CL:0000211!2.76e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.41e-12,23;CL:0000337,7.41e-12,23;CL:0002612,2.20e-08,3;CL:0002610,1.25e-07,3;CL:0000540,1.63e-07,33;CL:0000047,1.63e-07,33;CL:0000031,1.63e-07,33;CL:0000404,1.63e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.12e-35!52;UBERON:0005068!1.12e-35!52;UBERON:0006241!1.12e-35!52;UBERON:0007135!1.12e-35!52;UBERON:0000955!2.99e-33!50;UBERON:0006238!2.99e-33!50;UBERON:0002616!4.27e-32!49;UBERON:0001017!2.33e-31!73;UBERON:0005743!2.33e-31!73;UBERON:0000073!4.51e-30!75;UBERON:0001016!4.51e-30!75;UBERON:0002020!5.35e-28!34;UBERON:0003080!3.05e-27!40;UBERON:0002780!4.14e-26!39;UBERON:0001890!4.14e-26!39;UBERON:0006240!4.14e-26!39;UBERON:0000033!6.74e-26!63;UBERON:0002346!2.06e-24!71;UBERON:0003075!2.06e-24!71;UBERON:0007284!2.06e-24!71;UBERON:0003056!1.29e-22!49;UBERON:0002791!2.55e-22!29;UBERON:0003528!2.55e-22!29;UBERON:0001893!2.55e-22!29;UBERON:0004121!1.57e-19!102;UBERON:0000924!1.57e-19!102;UBERON:0006601!1.57e-19!102;UBERON:0000956!3.11e-15!21;UBERON:0001869!3.11e-15!21;UBERON:0000203!3.11e-15!21;UBERON:0007811!3.53e-15!86;UBERON:0002021!6.99e-13!10;UBERON:0000411!6.99e-13!10;UBERON:0001950!6.99e-13!10;UBERON:0000153!9.68e-13!94;UBERON:0002619!1.74e-12!17;UBERON:0000025!1.13e-08!114;UBERON:0003076!1.45e-08!12;UBERON:0003057!1.45e-08!12;UBERON:0002420!2.79e-08!8;UBERON:0007245!2.79e-08!8;UBERON:0010009!2.79e-08!8;UBERON:0010011!2.79e-08!8;UBERON:0000454!2.79e-08!8;UBERON:0002240!6.22e-08!6;UBERON:0005174!6.22e-08!6;UBERON:0001137!6.22e-08!6;UBERON:0004111!2.61e-07!122;UBERON:0002298!4.62e-07!6;UBERON:0001948!6.19e-07!5;UBERON:0002315!6.19e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.04e-39,54;UBERON:0001049,1.29e-35,52;UBERON:0005068,1.29e-35,52;UBERON:0006241,1.29e-35,52;UBERON:0007135,1.29e-35,52;UBERON:0001017,1.58e-33,73;UBERON:0002020,6.24e-33,34;UBERON:0001016,1.94e-32,75;UBERON:0002346,1.16e-27,64;UBERON:0003075,1.16e-27,64;UBERON:0007284,1.16e-27,64;UBERON:0000955,1.43e-26,47;UBERON:0006238,1.43e-26,47;UBERON:0002616,7.16e-25,46;UBERON:0003080,2.07e-24,40;UBERON:0004121,4.58e-24,95;UBERON:0000924,4.58e-24,95;UBERON:0006601,4.58e-24,95;UBERON:0002021,1.16e-23,10;UBERON:0000411,1.16e-23,10;UBERON:0001950,1.16e-23,10;UBERON:0010371,2.06e-23,73;UBERON:0003528,2.94e-23,29;UBERON:0002791,2.94e-23,29;UBERON:0001893,2.94e-23,29;UBERON:0002780,1.13e-22,39;UBERON:0001890,1.13e-22,39;UBERON:0006240,1.13e-22,39;UBERON:0002619,5.72e-19,17;UBERON:0003056,6.06e-19,49;UBERON:0000956,9.68e-18,21;UBERON:0001869,9.68e-18,21;UBERON:0000203,9.68e-18,21;UBERON:0010314,3.62e-17,92;UBERON:0002240,5.36e-14,6;UBERON:0005174,5.36e-14,6;UBERON:0001137,5.36e-14,6;UBERON:0000025,1.55e-12,114;UBERON:0001948,4.65e-12,5;UBERON:0002315,4.65e-12,5;UBERON:0003076,1.89e-11,12;UBERON:0003057,1.89e-11,12;UBERON:0004111,2.87e-11,122;UBERON:0002257,2.20e-08,3;UBERON:0011216,5.95e-08,194;UBERON:0004684,1.25e-07,3;UBERON:0002275,1.25e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,1.01158230429799,0,0.633831403506179,0,0,0,0,0,0,0,0.414758449233911,0.270011876663381,0.210324961351382,1.14260393761521,2.87129103237098,0.489963196859816,0.479227355091182,0,2.20231761998777,4.08599481872601,3.07213066512487,0.659431438650969,1.28082701043374,0.52091337055676,0.558365998002762,1.12552522006336,1.83357897332172,5.59794312399969,5.83723891276322,4.10078780815661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,3.74476598512057,3.20250421973039,2.63874139437015,8.8650403298061,4.60287823194595,4.77912502486988,3.73154905055843,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.62188789112922,2.05809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56880943980467,2.81308047821288,0,0,0,0,0,0,0,0,0,0,0,3.21321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0,0.214337035031592,0.354680467284547,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.21227026878773,1.38097570952153,1.14579102687879,6.01486138202907,7.53590771747707,6.7985450765073,6.07520250208625,4.5032120322422,4.07828168085784,5.1776031175182,0,0,0,0.243106717068294,0,0.183843508450014,0,0.412070114477788,0,0.505394423527595,0.50695859978048,0.377252682772152,0.655490552289177,0.832326981263301,0.574354689556133,1.42888107384922,0.579421629724277,0.77163688185482,0.824171801606613,0.441596760403192,1.02860775715625,0.70990322463735,0,1.0174249164263,0.376437521661322,0.676916863133412,0.73171189149109,0.526139422875686,0.679020569229309,0,0.711810108745045,0.788035859004508,0.409231043169689,0.309873682371932,0.578719832943424,0,0.701794825336225,0.644613162144895,0,0.220591419119515,0 | |||
|short_description=p4@Grm5 | |||
}} |
Revision as of 14:25, 14 September 2013
Short description: | p4@Grm5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Grm5_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -20bp_to_uc009ifq.1_5end |
EntrezGene: | Grm5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.41e-12 | 23 |
neuroblast (sensu Vertebrata) | 7.41e-12 | 23 |
neuron of the ventral spinal cord | 2.20e-08 | 3 |
raphe nuclei neuron | 1.25e-07 | 3 |
neuron | 1.63e-07 | 33 |
neuronal stem cell | 1.63e-07 | 33 |
neuroblast | 1.63e-07 | 33 |
electrically signaling cell | 1.63e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.