FFCP PHASE1:Mm9::chr18:33598395..33598414,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=42|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:33598395..33598414,-|id=chr18:33598395..33598414,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000197,3.20e-13,2;CL:0002491,3.20e-13,2;CL:0000098,3.20e-13,2;CL:0002611,1.25e-12,2;CL:0000120,3.75e-09,3;CL:0000117,7.98e-09,23;CL:0000337,7.98e-09,23;CL:0002613,2.45e-08,3;CL:0000540,3.67e-08,33;CL:0000047,3.67e-08,33;CL:0000031,3.67e-08,33;CL:0000404,3.67e-08,33;CL:0000221,8.66e-08,44;CL:0000133,8.66e-08,44;CL:0002374,1.83e-07,1;CL:0000202,1.83e-07,1;CL:0000199,1.83e-07,1;CL:0000855,1.83e-07,1;CL:0000589,1.83e-07,1;CL:0000710,2.11e-07,1;CL:0002077,2.11e-07,1;CL:0005014,2.11e-07,1;CL:0002315,2.11e-07,1;CL:0002490,2.11e-07,1;CL:0000393,8.29e-07,39;CL:0000211,8.29e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0004766,3.20e-13,2;UBERON:0008193,3.20e-13,2;UBERON:0005913,3.20e-13,2;UBERON:0011158,3.20e-13,2;UBERON:0005744,3.20e-13,2;UBERON:0003457,3.20e-13,2;UBERON:0008001,3.20e-13,2;UBERON:0007497,3.20e-13,2;UBERON:0009955,3.20e-13,2;UBERON:0003067,3.20e-13,2;UBERON:0002546,3.20e-13,2;UBERON:0007914,3.20e-13,2;UBERON:0005253,3.20e-13,2;UBERON:0002227,3.20e-13,2;UBERON:0001846,3.20e-13,2;UBERON:0004339,3.20e-13,2;UBERON:0002105,3.20e-13,2;UBERON:0001678,3.20e-13,2;UBERON:0003128,3.20e-13,2;UBERON:0001694,3.20e-13,2;UBERON:0004681,3.20e-13,2;UBERON:0001839,3.20e-13,2;UBERON:0001690,3.20e-13,2;UBERON:0001844,3.20e-13,2;UBERON:0001849,3.20e-13,2;UBERON:0002499,3.20e-13,2;UBERON:0001855,3.20e-13,2;UBERON:0011137,3.20e-13,2;UBERON:0001703,3.20e-13,2;UBERON:0010323,3.20e-13,2;UBERON:0003129,3.20e-13,2;UBERON:0003069,3.20e-13,2;UBERON:0003051,3.20e-13,2;UBERON:0004637,3.20e-13,2;UBERON:0004761,3.20e-13,2;UBERON:0010113,3.20e-13,2;UBERON:0009123,3.20e-13,2;UBERON:0010351,3.20e-13,2;UBERON:0009617,3.20e-13,2;UBERON:0005641,3.20e-13,2;UBERON:0010349,3.20e-13,2;UBERON:0002256,1.25e-12,2|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0,1.41621522601718,2.11596391708813,0.633831403506179,0,0,0,0,0,0.599200221036809,0.384218305321555,0.518448061542388,0.270011876663381,0.630974884054146,1.14260393761521,1.32521124570968,0.489963196859816,0.862609239164127,0.919218786610021,0,0,0,0.527545150920775,1.00636407962651,1.04182674111352,0,0,0,0.294628585473668,0.711858403995515,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,1.54927761754349,0,0,0,0,0,0,0,0,0,0.346970653532272,1.21786191324856,0.461230994512117,0,0.117588707135705,0.376999773989026,0.494389935468748,0,0,0.323533699894818,0,0,0,0.878342391034642,20.9446706813455,0,0,0,0,0,0,0.879580464790051,0,0.255715457330331,0,0,0.101839363850316,0.124406970610093,0,0,0.390361328888111,0,0.180062129805349,0.30140963567143,0.0680364991513279,0.384341160854549,0.281105173679186,0.258703370739016,0.646703978798527,0.189106080167819,0.175951124163949,0.657587197282725,0.556094498451196,1.0447564995665,0.205782136407943,0.796137067273973,0,0,0,0.621377317606506,0.469052119962192,0.36012412292203,0.23674473558521,0.196764231747404,0.462801338662135,0.232533944750408,0,0,0.493679549740441,0.492502392237286,0.0810688095458557,0,0,0,0,0.514523061896422,0,0,0,0.232236671860439,0,0.201683524623343,0.22237804384487,0,0.474529061544512,0,0.754005626400808,0.198956472041151,0.38992817423824,0.898819408654221,0,0,1.89667900953082,0.228497025219458,0,0.203651327845314,0,0.701358198903186,0.379419222745544,0.147610147979602,0,0,0,0,0,0,0,0.241177159752417,0.50925170356284,0.287696137450811,0.324270453550071,0.274561413188081,0,0.372140947668503,0,0,0.179397413521912,0,0.184753190166605,0.189491411770485,0.162964976442026,0.678980343100753,0.704070744865506,0.502518772325447,0.476087281772027,0.390267295715598,0.630540576424764,0.664394068946325,0.797273843287435,0.81931657357869,0.172684981865896,0,0,0,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0.215423397732799,0.238968797952552,0,0.566153061577665,0,0.584511715822624,0.790575555893047,0,0.283880170416537,1.06839362200353,0.488660878060728,0,0,0,1.209294227859,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0.712994756769443,0,0,0,0,0.540183282093931,0.905510786479282,0.428674070063185,0.354680467284547,0.178368817602071,0,0.608929898229199,0,0,0,0,0.322928853391811,0.120625849856312,0.238744688006273,0,0.291480836629851,0.18542530201051,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.632671987162271,0,0.432021363287205,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0,0,0,0.448549638131936,0,0,0.129159823477731,0.337912250981556,0.704143431874524,0.13020438484395,0.209718688851422,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0.572895513439397,0,0,0,0,0.45032120322422,0,0,0.9340861282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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=42 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:33598395..33598414,- | |||
|id=chr18:33598395..33598414,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,3.20e-13,2;CL:0002491,3.20e-13,2;CL:0000098,3.20e-13,2;CL:0002611,1.25e-12,2;CL:0000120,3.75e-09,3;CL:0000117,7.98e-09,23;CL:0000337,7.98e-09,23;CL:0002613,2.45e-08,3;CL:0000540,3.67e-08,33;CL:0000047,3.67e-08,33;CL:0000031,3.67e-08,33;CL:0000404,3.67e-08,33;CL:0000221,8.66e-08,44;CL:0000133,8.66e-08,44;CL:0002374,1.83e-07,1;CL:0000202,1.83e-07,1;CL:0000199,1.83e-07,1;CL:0000855,1.83e-07,1;CL:0000589,1.83e-07,1;CL:0000710,2.11e-07,1;CL:0002077,2.11e-07,1;CL:0005014,2.11e-07,1;CL:0002315,2.11e-07,1;CL:0002490,2.11e-07,1;CL:0000393,8.29e-07,39;CL:0000211,8.29e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004766,3.20e-13,2;UBERON:0008193,3.20e-13,2;UBERON:0005913,3.20e-13,2;UBERON:0011158,3.20e-13,2;UBERON:0005744,3.20e-13,2;UBERON:0003457,3.20e-13,2;UBERON:0008001,3.20e-13,2;UBERON:0007497,3.20e-13,2;UBERON:0009955,3.20e-13,2;UBERON:0003067,3.20e-13,2;UBERON:0002546,3.20e-13,2;UBERON:0007914,3.20e-13,2;UBERON:0005253,3.20e-13,2;UBERON:0002227,3.20e-13,2;UBERON:0001846,3.20e-13,2;UBERON:0004339,3.20e-13,2;UBERON:0002105,3.20e-13,2;UBERON:0001678,3.20e-13,2;UBERON:0003128,3.20e-13,2;UBERON:0001694,3.20e-13,2;UBERON:0004681,3.20e-13,2;UBERON:0001839,3.20e-13,2;UBERON:0001690,3.20e-13,2;UBERON:0001844,3.20e-13,2;UBERON:0001849,3.20e-13,2;UBERON:0002499,3.20e-13,2;UBERON:0001855,3.20e-13,2;UBERON:0011137,3.20e-13,2;UBERON:0001703,3.20e-13,2;UBERON:0010323,3.20e-13,2;UBERON:0003129,3.20e-13,2;UBERON:0003069,3.20e-13,2;UBERON:0003051,3.20e-13,2;UBERON:0004637,3.20e-13,2;UBERON:0004761,3.20e-13,2;UBERON:0010113,3.20e-13,2;UBERON:0009123,3.20e-13,2;UBERON:0010351,3.20e-13,2;UBERON:0009617,3.20e-13,2;UBERON:0005641,3.20e-13,2;UBERON:0010349,3.20e-13,2;UBERON:0002256,1.25e-12,2 | |||
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0,1.41621522601718,2.11596391708813,0.633831403506179,0,0,0,0,0,0.599200221036809,0.384218305321555,0.518448061542388,0.270011876663381,0.630974884054146,1.14260393761521,1.32521124570968,0.489963196859816,0.862609239164127,0.919218786610021,0,0,0,0.527545150920775,1.00636407962651,1.04182674111352,0,0,0,0.294628585473668,0.711858403995515,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,1.54927761754349,0,0,0,0,0,0,0,0,0,0.346970653532272,1.21786191324856,0.461230994512117,0,0.117588707135705,0.376999773989026,0.494389935468748,0,0,0.323533699894818,0,0,0,0.878342391034642,20.9446706813455,0,0,0,0,0,0,0.879580464790051,0,0.255715457330331,0,0,0.101839363850316,0.124406970610093,0,0,0.390361328888111,0,0.180062129805349,0.30140963567143,0.0680364991513279,0.384341160854549,0.281105173679186,0.258703370739016,0.646703978798527,0.189106080167819,0.175951124163949,0.657587197282725,0.556094498451196,1.0447564995665,0.205782136407943,0.796137067273973,0,0,0,0.621377317606506,0.469052119962192,0.36012412292203,0.23674473558521,0.196764231747404,0.462801338662135,0.232533944750408,0,0,0.493679549740441,0.492502392237286,0.0810688095458557,0,0,0,0,0.514523061896422,0,0,0,0.232236671860439,0,0.201683524623343,0.22237804384487,0,0.474529061544512,0,0.754005626400808,0.198956472041151,0.38992817423824,0.898819408654221,0,0,1.89667900953082,0.228497025219458,0,0.203651327845314,0,0.701358198903186,0.379419222745544,0.147610147979602,0,0,0,0,0,0,0,0.241177159752417,0.50925170356284,0.287696137450811,0.324270453550071,0.274561413188081,0,0.372140947668503,0,0,0.179397413521912,0,0.184753190166605,0.189491411770485,0.162964976442026,0.678980343100753,0.704070744865506,0.502518772325447,0.476087281772027,0.390267295715598,0.630540576424764,0.664394068946325,0.797273843287435,0.81931657357869,0.172684981865896,0,0,0,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0.215423397732799,0.238968797952552,0,0.566153061577665,0,0.584511715822624,0.790575555893047,0,0.283880170416537,1.06839362200353,0.488660878060728,0,0,0,1.209294227859,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0.712994756769443,0,0,0,0,0.540183282093931,0.905510786479282,0.428674070063185,0.354680467284547,0.178368817602071,0,0.608929898229199,0,0,0,0,0.322928853391811,0.120625849856312,0.238744688006273,0,0.291480836629851,0.18542530201051,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.632671987162271,0,0.432021363287205,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0,0,0,0.448549638131936,0,0,0.129159823477731,0.337912250981556,0.704143431874524,0.13020438484395,0.209718688851422,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0.572895513439397,0,0,0,0,0.45032120322422,0,0,0.93408612825759,0,0.170733605754134,0.243106717068294,0.838452650511929,0.367687016900028,0,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0,0.280924522409647,0,0.17230640686684,0.476293691283074,0.231768651889711,0,0.824171801606613,0,0,0.70990322463735,0.238436189947321,0.581385666529314,0.282328141245992,0.338458431566706,0.73171189149109,0.789209134313529,0.135804113845862,0.561142271657738,0.355905054372522,0.29551344712669,0.409231043169689,0.154936841185966,0.578719832943424,0.249810577937946,0,0,1.3390183244819,0.441182838239031,0 | |||
|short_description=p@chr18:33598395..33598414,- | |||
}} |
Revision as of 15:56, 13 September 2013
Short description: | p@chr18:33598395..33598414, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:33598395..33598414, - |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 3.20e-13 | 2 |
auditory epithelial cell | 3.20e-13 | 2 |
sensory epithelial cell | 3.20e-13 | 2 |
neuron of the dorsal spinal cord | 1.25e-12 | 2 |
granule cell | 3.75e-09 | 3 |
CNS neuron (sensu Vertebrata) | 7.98e-09 | 23 |
neuroblast (sensu Vertebrata) | 7.98e-09 | 23 |
striatum neuron | 2.45e-08 | 3 |
neuron | 3.67e-08 | 33 |
neuronal stem cell | 3.67e-08 | 33 |
neuroblast | 3.67e-08 | 33 |
electrically signaling cell | 3.67e-08 | 33 |
ectodermal cell | 8.66e-08 | 44 |
neurectodermal cell | 8.66e-08 | 44 |
ear hair cell | 1.83e-07 | 1 |
auditory hair cell | 1.83e-07 | 1 |
mechanoreceptor cell | 1.83e-07 | 1 |
sensory hair cell | 1.83e-07 | 1 |
cochlear inner hair cell | 1.83e-07 | 1 |
neurecto-epithelial cell | 2.11e-07 | 1 |
ecto-epithelial cell | 2.11e-07 | 1 |
auditory epithelial support cell | 2.11e-07 | 1 |
supporting cell of cochlea | 2.11e-07 | 1 |
organ of Corti supporting cell | 2.11e-07 | 1 |
electrically responsive cell | 8.29e-07 | 39 |
electrically active cell | 8.29e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.