FFCP PHASE1:Hg19::chr10:102792188..102792219,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=81855 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=16087 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=117bp_to_uc001ksq.2,uc010qpx.1_5end | |||
|description=CAGE_peak_3_at_SFXN3_5end | |||
|id=chr10:102792188..102792219,+ | |||
|ontology_enrichment_celltype=CL:0002371!1.09e-26!591;CL:0000144!7.42e-23!625;CL:0000055!3.49e-21!180;CL:0000048!7.33e-21!430;CL:0000723!4.06e-20!436;CL:0000034!6.55e-18!444;CL:0000557!2.52e-17!71;CL:0002009!1.75e-15!65;CL:0000839!4.07e-15!70;CL:0000548!5.60e-15!679;CL:0000004!5.60e-15!679;CL:0000255!5.60e-15!679;CL:0000012!1.17e-14!682;CL:0002194!1.29e-14!63;CL:0000576!1.29e-14!63;CL:0000040!1.29e-14!63;CL:0000559!1.29e-14!63;CL:0002057!5.27e-14!42;CL:0000057!8.52e-14!75;CL:0000766!1.07e-13!76;CL:0000860!1.93e-13!45;CL:0000222!1.62e-12!119;CL:0002320!2.19e-11!365;CL:0000134!3.74e-11!358;CL:0000219!6.42e-11!390;CL:0000003!6.01e-09!722;CL:0000192!1.99e-08!42;CL:0000514!1.99e-08!42;CL:0002620!3.86e-08!23;CL:0000183!5.73e-08!59;CL:0000359!6.50e-08!32;CL:0000680!1.03e-07!57;CL:0000056!1.03e-07!57;CL:0000355!1.03e-07!57;CL:0000115!2.03e-07!35;CL:0000063!2.77e-07!578;CL:0000187!7.30e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.81e-15;33!CL:0002057;4.81e-15;33!CL:0000473;2.91e-14;39!CL:0000234;2.91e-14;39!CL:0000576;8.66e-09;48!CL:0002620;3.20e-08;23!CL:0000359;1.59e-07;32!CL:0000766;2.85e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.07e-20,427;CL:0000723,6.24e-20,433;CL:0000557,2.81e-18,67;CL:0000034,1.33e-17,441;CL:0002009,2.10e-16,61;CL:0000473,5.02e-16,48;CL:0000234,5.02e-16,48;CL:0000839,6.05e-16,66;CL:0002194,1.65e-15,59;CL:0000576,1.65e-15,59;CL:0000040,1.65e-15,59;CL:0000559,1.65e-15,59;CL:0000766,1.34e-14,72;CL:0000860,4.47e-14,42;CL:0002057,4.47e-14,42;CL:0000057,1.64e-13,76;CL:0000222,1.09e-12,121;CL:0002320,2.62e-11,361;CL:0000134,4.46e-11,354;CL:0000219,1.12e-10,386;CL:0002620,3.53e-08,23;CL:0000192,4.82e-08,43;CL:0000514,4.82e-08,43;CL:0000359,5.97e-08,32;CL:0000115,7.53e-08,36;CL:0000680,2.01e-07,58;CL:0000056,2.01e-07,58;CL:0000355,2.01e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002057;1.50e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!5.07e-23!167;UBERON:0003081!5.16e-23!216;UBERON:0000467!6.48e-17!625;UBERON:0000480!1.59e-16!626;UBERON:0002371!1.83e-16!80;UBERON:0004765!2.75e-16!101;UBERON:0001434!2.75e-16!101;UBERON:0001474!4.22e-15!86;UBERON:0000468!5.09e-15!659;UBERON:0002049!1.61e-13!79;UBERON:0007798!1.61e-13!79;UBERON:0000055!7.64e-13!69;UBERON:0001981!5.52e-12!60;UBERON:0007500!5.52e-12!60;UBERON:0004537!5.52e-12!60;UBERON:0006965!5.52e-12!60;UBERON:0004872!7.56e-12!84;UBERON:0001637!9.39e-12!42;UBERON:0003509!9.39e-12!42;UBERON:0004572!9.39e-12!42;UBERON:0002405!2.77e-10!115;UBERON:0002384!2.83e-10!375;UBERON:0000923!2.40e-09!604;UBERON:0005291!2.40e-09!604;UBERON:0006598!2.40e-09!604;UBERON:0002532!2.40e-09!604;UBERON:0002050!2.73e-09!605;UBERON:0005423!2.73e-09!605;UBERON:0000926!4.76e-09!448;UBERON:0004120!4.76e-09!448;UBERON:0006603!4.76e-09!448;UBERON:0002193!9.01e-09!112;UBERON:0000914!9.24e-09!83;UBERON:0002329!9.24e-09!83;UBERON:0003077!9.24e-09!83;UBERON:0003059!9.24e-09!83;UBERON:0007282!9.24e-09!83;UBERON:0009618!9.24e-09!83;UBERON:0007285!9.24e-09!83;UBERON:0004535!1.76e-08!110;UBERON:0004573!2.01e-08!33;UBERON:0004571!2.01e-08!33;UBERON:0000062!2.22e-08!511;UBERON:0000922!4.51e-08!612;UBERON:0000486!6.77e-08!82;UBERON:0002390!6.98e-08!102;UBERON:0003061!6.98e-08!102;UBERON:0003914!8.51e-08!118;UBERON:0001009!9.17e-08!113;UBERON:0004290!1.28e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.13e-08;42!UBERON:0003509;1.13e-08;42!UBERON:0004572;1.13e-08;42!UBERON:0007500;1.87e-08;56!UBERON:0001981;1.87e-08;56!UBERON:0004537;1.87e-08;56!UBERON:0000055;7.00e-08;65!UBERON:0004573;1.17e-07;33!UBERON:0004571;1.17e-07;33 | |||
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| |||
|short_description=p3@SFXN3 | |||
}} |
Revision as of 11:21, 10 September 2013
Short description: | p3@SFXN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SFXN3_5end |
Coexpression cluster: | NA |
Association with transcript: | 117bp_to_uc001ksq.2, uc010qpx.1_5end |
EntrezGene: | SFXN3 |
HGNC: | 16087 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.07e-20 | 427 |
somatic stem cell | 6.24e-20 | 433 |
granulocyte monocyte progenitor cell | 2.81e-18 | 67 |
stem cell | 1.33e-17 | 441 |
macrophage dendritic cell progenitor | 2.10e-16 | 61 |
defensive cell | 5.02e-16 | 48 |
phagocyte | 5.02e-16 | 48 |
myeloid lineage restricted progenitor cell | 6.05e-16 | 66 |
monopoietic cell | 1.65e-15 | 59 |
monocyte | 1.65e-15 | 59 |
monoblast | 1.65e-15 | 59 |
promonocyte | 1.65e-15 | 59 |
myeloid leukocyte | 1.34e-14 | 72 |
classical monocyte | 4.47e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.47e-14 | 42 |
fibroblast | 1.64e-13 | 76 |
mesodermal cell | 1.09e-12 | 121 |
connective tissue cell | 2.62e-11 | 361 |
mesenchymal cell | 4.46e-11 | 354 |
motile cell | 1.12e-10 | 386 |
skin fibroblast | 3.53e-08 | 23 |
smooth muscle cell | 4.82e-08 | 43 |
smooth muscle myoblast | 4.82e-08 | 43 |
vascular associated smooth muscle cell | 5.97e-08 | 32 |
endothelial cell | 7.53e-08 | 36 |
muscle precursor cell | 2.01e-07 | 58 |
myoblast | 2.01e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.01e-07 | 58 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.