FFCP PHASE1:Hg19::chr11:67174819..67174825,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5499|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9281|TSSclassifier=S|UniProt=|association_with_transcript=-84bp_to_ENST00000537694_5end|coexpression_cluster_id=C35|description=CAGE_peak_14_at_PPP1CA_5end|id=chr11:67174819..67174825,-|ontology_enrichment_celltype=CL:0000542!9.89e-12!53;CL:0000051!9.89e-12!53;CL:0000945!1.48e-11!24;CL:0000826!1.48e-11!24;CL:0000236!5.84e-11!14;CL:0000838!2.29e-10!52|ontology_enrichment_celltype_v019=CL:0000785;9.48e-18;1!CL:0000819;9.48e-18;1|ontology_enrichment_celltype_v019_2=CL:0000819,1.03e-17,1;CL:0000785,1.57e-09,2;CL:0000955,1.57e-09,2;CL:0000818,1.57e-09,2;CL:0000954,1.57e-09,2;CL:0000816,1.57e-09,2;CL:0000817,9.12e-07,3|ontology_enrichment_development_v019=UBERON:0010122;1.31e-34;2!UBERON:0006222;9.48e-18;1!CL:0000954;1.51e-09;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060073;9.48e-18;1!DOID:8675;9.48e-18;1!DOID:12603;9.48e-18;1|ontology_enrichment_disease_v019_2=DOID:0060073,1.03e-17,1;DOID:8675,1.03e-17,1;DOID:12603,1.44e-17,1|ontology_enrichment_uberon=UBERON:0001049!5.94e-45!57;UBERON:0005068!5.94e-45!57;UBERON:0006241!5.94e-45!57;UBERON:0007135!5.94e-45!57;UBERON:0002780!6.73e-42!41;UBERON:0001890!6.73e-42!41;UBERON:0006240!6.73e-42!41;UBERON:0003080!9.22e-41!42;UBERON:0001893!6.99e-39!34;UBERON:0002616!2.60e-37!59;UBERON:0002791!2.27e-36!33;UBERON:0002020!5.65e-35!34;UBERON:0003528!5.65e-35!34;UBERON:0001017!6.66e-35!82;UBERON:0001869!8.66e-34!32;UBERON:0005743!6.62e-33!86;UBERON:0000955!1.18e-32!69;UBERON:0006238!1.18e-32!69;UBERON:0003075!3.22e-31!86;UBERON:0007284!3.22e-31!86;UBERON:0007023!5.44e-30!115;UBERON:0002346!1.84e-29!90;UBERON:0000073!5.11e-29!94;UBERON:0001016!5.11e-29!94;UBERON:0003056!3.67e-26!61;UBERON:0009663!3.75e-24!7;UBERON:0002308!1.45e-23!9;UBERON:0000125!1.45e-23!9;UBERON:0002619!1.67e-19!22;UBERON:0002420!1.61e-18!9;UBERON:0007245!1.61e-18!9;UBERON:0010009!1.61e-18!9;UBERON:0010011!1.61e-18!9;UBERON:0000454!1.61e-18!9;UBERON:0001950!2.15e-18!20;UBERON:0000200!4.45e-18!6;UBERON:0000033!1.05e-17!123;UBERON:0000956!6.60e-17!25;UBERON:0000203!6.60e-17!25;UBERON:0000153!1.60e-16!129;UBERON:0007811!1.60e-16!129;UBERON:0000369!9.93e-15!4;UBERON:0002435!9.93e-15!4;UBERON:0000204!9.93e-15!4;UBERON:0010082!9.93e-15!4;UBERON:0004121!1.41e-13!169;UBERON:0000924!4.50e-13!173;UBERON:0006601!4.50e-13!173;UBERON:0005383!1.68e-11!3;UBERON:0005382!1.68e-11!3;UBERON:0002771!1.60e-09!3;UBERON:0002298!2.74e-09!8;UBERON:0001873!3.17e-08!2;UBERON:0010122!3.17e-08!2;UBERON:0001875!4.92e-08!2;UBERON:0006514!4.92e-08!2;UBERON:0001897!5.63e-08!2;UBERON:0000025!7.50e-08!194;UBERON:0001870!2.69e-07!2;UBERON:0002360!8.26e-07!2;UBERON:0000094!8.26e-07!2;UBERON:0007645!8.26e-07!2|ontology_enrichment_uberon_v019=UBERON:0009663;5.12e-115;7!UBERON:0002420;1.80e-89;9!UBERON:0000125;1.80e-89;9!UBERON:0007245;1.80e-89;9!UBERON:0002308;1.80e-89;9!UBERON:0010009;1.80e-89;9!UBERON:0010011;1.80e-89;9!UBERON:0000454;1.80e-89;9!UBERON:0000369;3.46e-67;4!UBERON:0002435;3.46e-67;4!UBERON:0000204;3.46e-67;4!UBERON:0005383;5.77e-51;3!UBERON:0005382;5.77e-51;3!UBERON:0001873;1.31e-34;2!UBERON:0001875;1.17e-33;2!UBERON:0006514;1.17e-33;2!UBERON:0002791;2.14e-23;32!UBERON:0002780;3.56e-23;41!UBERON:0001890;3.56e-23;41!UBERON:0003528;1.46e-19;34!UBERON:0002020;1.46e-19;34!UBERON:0001893;7.30e-19;34!UBERON:0001874;3.16e-18;1!UBERON:0001882;4.44e-18;1!UBERON:0005403;4.44e-18;1!UBERON:0002038;9.48e-18;1!UBERON:0009661;9.48e-18;1!UBERON:0002950;9.48e-18;1!UBERON:0001891;9.48e-18;1!UBERON:0001869;5.09e-17;32!UBERON:0000073;3.77e-15;53!UBERON:0002616;3.77e-15;53!UBERON:0000955;2.31e-12;68!UBERON:0001894;2.35e-10;7!UBERON:0001897;1.51e-09;2!UBERON:0010225;1.51e-09;2!UBERON:0001017;2.13e-09;75!UBERON:0001016;5.54e-08;83|ontology_enrichment_uberon_v019_2=UBERON:0009663,9.29e-115,7;UBERON:0002420,2.86e-89,9;UBERON:0000125,2.86e-89,9;UBERON:0007245,2.86e-89,9;UBERON:0002308,2.86e-89,9;UBERON:0010009,2.86e-89,9;UBERON:0010011,2.86e-89,9;UBERON:0000454,2.86e-89,9;UBERON:0000369,3.47e-67,4;UBERON:0002435,3.47e-67,4;UBERON:0000204,3.47e-67,4;UBERON:0010082,3.47e-67,4;UBERON:0005383,5.78e-51,3;UBERON:0005382,5.78e-51,3;UBERON:0001873,1.31e-34,2;UBERON:0010122,1.31e-34,2;UBERON:0001875,1.17e-33,2;UBERON:0006514,1.17e-33,2;UBERON:0002780,3.24e-31,41;UBERON:0001890,3.24e-31,41;UBERON:0003080,3.24e-31,41;UBERON:0006240,3.24e-31,41;UBERON:0002791,3.02e-24,32;UBERON:0000073,3.67e-24,53;UBERON:0002616,3.67e-24,53;UBERON:0001049,7.35e-23,56;UBERON:0005068,7.35e-23,56;UBERON:0006241,7.35e-23,56;UBERON:0007135,7.35e-23,56;UBERON:0003528,7.58e-23,34;UBERON:0002020,7.58e-23,34;UBERON:0001893,7.58e-23,34;UBERON:0003056,5.71e-21,61;UBERON:0000955,1.67e-18,68;UBERON:0006238,1.67e-18,68;UBERON:0001874,3.16e-18,1;UBERON:0001882,4.44e-18,1;UBERON:0005403,4.44e-18,1;UBERON:0001869,5.00e-18,32;UBERON:0002038,1.70e-17,1;UBERON:0009661,1.70e-17,1;UBERON:0002950,1.70e-17,1;UBERON:0001891,1.70e-17,1;UBERON:0009616,1.70e-17,1;UBERON:0010286,1.70e-17,1;UBERON:0001017,1.66e-15,81;UBERON:0003075,1.66e-15,82;UBERON:0007284,1.66e-15,82;UBERON:0002346,9.20e-15,86;UBERON:0001016,6.35e-14,89;UBERON:0010371,4.11e-12,104;UBERON:0007023,4.24e-11,114;UBERON:0001894,2.04e-10,7;UBERON:0006222,2.04e-10,7;UBERON:0001897,1.22e-09,2;UBERON:0010225,1.22e-09,2;UBERON:0010314,2.10e-09,132;UBERON:0004121,5.37e-07,171;UBERON:0000924,5.37e-07,171;UBERON:0006601,5.37e-07,171|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,0,0,0.400395987036012,0,0.661044872784862,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0.260118695119756,0.164437904603676,0,0.289803085735052,0,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0.950452044448374,0.301150238155546,0,0,0.236777252044017,0,0.403213486449465,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0.476981248610684,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,1.11481905075431,0.721346064882224,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,5.31444831488303,8.32115426515315,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,1.63985112007737,1.45963831372533,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,1.64286454670392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.1251909307065,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40414893011235,0,0.319267718114302,0.205116364240755,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0.131545547125698,0,0,0,7.38443272605209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0.0939839179798536,0,0,0,0,0,0,0,1.00337708206016,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0.827463966895162,0,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p14@PPP1CA}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5499 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9281 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-84bp_to_ENST00000537694_5end | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_14_at_PPP1CA_5end | |||
|id=chr11:67174819..67174825,- | |||
|ontology_enrichment_celltype=CL:0000542!9.89e-12!53;CL:0000051!9.89e-12!53;CL:0000945!1.48e-11!24;CL:0000826!1.48e-11!24;CL:0000236!5.84e-11!14;CL:0000838!2.29e-10!52 | |||
|ontology_enrichment_celltype_v019=CL:0000785;9.48e-18;1!CL:0000819;9.48e-18;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,1.03e-17,1;CL:0000785,1.57e-09,2;CL:0000955,1.57e-09,2;CL:0000818,1.57e-09,2;CL:0000954,1.57e-09,2;CL:0000816,1.57e-09,2;CL:0000817,9.12e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.31e-34;2!UBERON:0006222;9.48e-18;1!CL:0000954;1.51e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;9.48e-18;1!DOID:8675;9.48e-18;1!DOID:12603;9.48e-18;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,1.03e-17,1;DOID:8675,1.03e-17,1;DOID:12603,1.44e-17,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0009663;5.12e-115;7!UBERON:0002420;1.80e-89;9!UBERON:0000125;1.80e-89;9!UBERON:0007245;1.80e-89;9!UBERON:0002308;1.80e-89;9!UBERON:0010009;1.80e-89;9!UBERON:0010011;1.80e-89;9!UBERON:0000454;1.80e-89;9!UBERON:0000369;3.46e-67;4!UBERON:0002435;3.46e-67;4!UBERON:0000204;3.46e-67;4!UBERON:0005383;5.77e-51;3!UBERON:0005382;5.77e-51;3!UBERON:0001873;1.31e-34;2!UBERON:0001875;1.17e-33;2!UBERON:0006514;1.17e-33;2!UBERON:0002791;2.14e-23;32!UBERON:0002780;3.56e-23;41!UBERON:0001890;3.56e-23;41!UBERON:0003528;1.46e-19;34!UBERON:0002020;1.46e-19;34!UBERON:0001893;7.30e-19;34!UBERON:0001874;3.16e-18;1!UBERON:0001882;4.44e-18;1!UBERON:0005403;4.44e-18;1!UBERON:0002038;9.48e-18;1!UBERON:0009661;9.48e-18;1!UBERON:0002950;9.48e-18;1!UBERON:0001891;9.48e-18;1!UBERON:0001869;5.09e-17;32!UBERON:0000073;3.77e-15;53!UBERON:0002616;3.77e-15;53!UBERON:0000955;2.31e-12;68!UBERON:0001894;2.35e-10;7!UBERON:0001897;1.51e-09;2!UBERON:0010225;1.51e-09;2!UBERON:0001017;2.13e-09;75!UBERON:0001016;5.54e-08;83 | |||
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|short_description=p14@PPP1CA | |||
}} |
Revision as of 19:15, 10 September 2013
Short description: | p14@PPP1CA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_PPP1CA_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | -84bp_to_ENST00000537694_5end |
EntrezGene: | PPP1CA |
HGNC: | 9281 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 1.03e-17 | 1 |
mature B cell | 1.57e-09 | 2 |
pre-B-II cell | 1.57e-09 | 2 |
transitional stage B cell | 1.57e-09 | 2 |
small pre-B-II cell | 1.57e-09 | 2 |
immature B cell | 1.57e-09 | 2 |
precursor B cell | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 1.03e-17 | 1 |
lymphosarcoma | 1.03e-17 | 1 |
acute leukemia | 1.44e-17 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.