FFCP PHASE1:Hg19::chr12:40618331..40618360,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=120892|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18618|TSSclassifier=W|UniProt=E9PC85,Q17RV3,Q5S007|association_with_transcript=-452bp_to_ENST00000343742,NM_198578,uc001rmg.3_5end|description=CAGE_peak_5_at_LRRK2_5end|id=chr12:40618331..40618360,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0010122;9.00e-12;2!UBERON:0006601;1.20e-08;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.08e-38!115;UBERON:0002780!1.65e-24!41;UBERON:0001890!1.65e-24!41;UBERON:0006240!1.65e-24!41;UBERON:0003080!1.29e-23!42;UBERON:0001049!1.67e-23!57;UBERON:0005068!1.67e-23!57;UBERON:0006241!1.67e-23!57;UBERON:0007135!1.67e-23!57;UBERON:0001893!1.87e-22!34;UBERON:0002791!1.94e-21!33;UBERON:0001869!1.97e-21!32;UBERON:0002616!1.40e-20!59;UBERON:0002020!2.16e-20!34;UBERON:0003528!2.16e-20!34;UBERON:0003075!3.46e-19!86;UBERON:0007284!3.46e-19!86;UBERON:0005743!4.02e-19!86;UBERON:0000955!4.49e-19!69;UBERON:0006238!4.49e-19!69;UBERON:0001017!1.02e-18!82;UBERON:0002346!1.51e-17!90;UBERON:0001950!2.60e-17!20;UBERON:0000073!2.86e-17!94;UBERON:0001016!2.86e-17!94;UBERON:0002619!4.53e-17!22;UBERON:0000956!1.08e-16!25;UBERON:0000203!1.08e-16!25;UBERON:0000033!1.35e-15!123;UBERON:0000153!1.48e-15!129;UBERON:0007811!1.48e-15!129;UBERON:0003056!2.95e-15!61;UBERON:0004121!2.03e-13!169;UBERON:0000924!1.31e-12!173;UBERON:0006601!1.31e-12!173;UBERON:0000062!2.92e-12!511;UBERON:0000468!1.24e-11!659;UBERON:0000467!1.37e-11!625;UBERON:0000480!1.74e-11!626;UBERON:0002050!1.32e-10!605;UBERON:0005423!1.32e-10!605;UBERON:0000922!2.18e-10!612;UBERON:0000923!3.46e-10!604;UBERON:0005291!3.46e-10!604;UBERON:0006598!3.46e-10!604;UBERON:0002532!3.46e-10!604;UBERON:0000475!5.20e-08!365;UBERON:0000200!1.57e-07!6;UBERON:0002420!2.92e-07!9;UBERON:0007245!2.92e-07!9;UBERON:0010009!2.92e-07!9;UBERON:0010011!2.92e-07!9;UBERON:0000454!2.92e-07!9;UBERON:0004111!4.18e-07!241;UBERON:0002021!9.65e-07!5|ontology_enrichment_uberon_v019=UBERON:0001869;3.94e-35;32!UBERON:0001893;8.59e-34;34!UBERON:0002791;2.77e-32;32!UBERON:0001950;3.74e-30;20!UBERON:0003528;1.85e-28;34!UBERON:0002020;1.85e-28;34!UBERON:0002619;2.41e-27;22!UBERON:0000956;6.10e-24;25!UBERON:0000203;6.10e-24;25!UBERON:0002780;8.62e-23;41!UBERON:0001890;8.62e-23;41!UBERON:0000369;8.74e-22;4!UBERON:0002435;8.74e-22;4!UBERON:0000204;8.74e-22;4!UBERON:0002021;1.51e-18;5!UBERON:0005383;8.74e-17;3!UBERON:0005382;8.74e-17;3!UBERON:0000073;1.42e-15;53!UBERON:0002616;1.42e-15;53!UBERON:0000200;1.37e-14;6!UBERON:0007023;3.24e-14;114!UBERON:0000955;2.99e-13;68!UBERON:0001017;1.18e-12;75!UBERON:0009663;1.58e-12;7!UBERON:0001873;9.00e-12;2!UBERON:0002420;8.99e-10;9!UBERON:0000125;8.99e-10;9!UBERON:0007245;8.99e-10;9!UBERON:0002308;8.99e-10;9!UBERON:0010009;8.99e-10;9!UBERON:0010011;8.99e-10;9!UBERON:0000454;8.99e-10;9!UBERON:0001016;1.09e-08;83!UBERON:0001870;2.07e-08;3!UBERON:0002902;3.82e-07;1!UBERON:0002022;3.82e-07;1!UBERON:0002171;3.82e-07;1!UBERON:0006518;3.82e-07;1!UBERON:0008949;3.82e-07;1!UBERON:0009899;3.82e-07;1!UBERON:0000101;3.82e-07;1!UBERON:0002167;3.82e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0001869,2.33e-39,32;UBERON:0001893,6.54e-37,34;UBERON:0007023,9.21e-35,114;UBERON:0002791,1.80e-34,32;UBERON:0002780,3.81e-34,41;UBERON:0001890,3.81e-34,41;UBERON:0003080,3.81e-34,41;UBERON:0006240,3.81e-34,41;UBERON:0003528,2.57e-32,34;UBERON:0002020,2.57e-32,34;UBERON:0001950,2.16e-30,20;UBERON:0000073,4.76e-29,53;UBERON:0002616,4.76e-29,53;UBERON:0002619,1.46e-27,22;UBERON:0001049,2.60e-27,56;UBERON:0005068,2.60e-27,56;UBERON:0006241,2.60e-27,56;UBERON:0007135,2.60e-27,56;UBERON:0003056,1.14e-24,61;UBERON:0000955,3.50e-24,68;UBERON:0006238,3.50e-24,68;UBERON:0000956,3.93e-24,25;UBERON:0000203,3.93e-24,25;UBERON:0001017,3.87e-22,81;UBERON:0000369,2.75e-21,4;UBERON:0002435,2.75e-21,4;UBERON:0000204,2.75e-21,4;UBERON:0010082,2.75e-21,4;UBERON:0003075,1.22e-19,82;UBERON:0007284,1.22e-19,82;UBERON:0001016,1.53e-19,89;UBERON:0002346,1.51e-18,86;UBERON:0002021,2.23e-18,5;UBERON:0005383,1.88e-16,3;UBERON:0005382,1.88e-16,3;UBERON:0000200,5.03e-15,6;UBERON:0010371,1.18e-14,104;UBERON:0009663,2.99e-12,7;UBERON:0010314,4.81e-12,132;UBERON:0001873,1.07e-11,2;UBERON:0010122,1.07e-11,2;UBERON:0004121,2.01e-10,171;UBERON:0000924,2.01e-10,171;UBERON:0006601,2.01e-10,171;UBERON:0002420,1.47e-09,9;UBERON:0000125,1.47e-09,9;UBERON:0007245,1.47e-09,9;UBERON:0002308,1.47e-09,9;UBERON:0010009,1.47e-09,9;UBERON:0010011,1.47e-09,9;UBERON:0000454,1.47e-09,9;UBERON:0011216,8.39e-09,223;UBERON:0001870,1.58e-08,3;UBERON:0002022,3.73e-07,1;UBERON:0002171,3.95e-07,1;UBERON:0006518,3.95e-07,1;UBERON:0008949,3.95e-07,1;UBERON:0000101,3.95e-07,1;UBERON:0002167,3.95e-07,1;UBERON:0002902,4.18e-07,1;UBERON:0009899,4.18e-07,1;UBERON:0000025,4.57e-07,192;UBERON:0000996,4.69e-07,1;UBERON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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=120892 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18618 | |||
|TSSclassifier=W | |||
|UniProt=E9PC85,Q17RV3,Q5S007 | |||
|association_with_transcript=-452bp_to_ENST00000343742,NM_198578,uc001rmg.3_5end | |||
|description=CAGE_peak_5_at_LRRK2_5end | |||
|id=chr12:40618331..40618360,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;9.00e-12;2!UBERON:0006601;1.20e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p5@LRRK2 | |||
}} |
Revision as of 22:33, 10 September 2013
Short description: | p5@LRRK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_LRRK2_5end |
Coexpression cluster: | NA |
Association with transcript: | -452bp_to_ENST00000343742, NM_198578, uc001rmg.3_5end |
EntrezGene: | LRRK2 |
HGNC: | 18618 |
UniProt: | E9PC85Q17RV3Q5S007 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.