FFCP PHASE1:Hg19::chr15:75940218..75940298,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=257364 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28468 | |||
|TSSclassifier=S | |||
|UniProt=Q8WV41 | |||
|association_with_transcript=0bp_to_ENST00000308527_5end | |||
|description=CAGE_peak_1_at_SNX33_5end | |||
|id=chr15:75940218..75940298,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.04e-14!180;CL:0000220!2.44e-12!246;CL:0002321!3.32e-12!248;CL:0000057!8.49e-09!75;CL:0000183!6.73e-08!59;CL:0000192!2.34e-07!42;CL:0000514!2.34e-07!42;CL:0000222!4.75e-07!119;CL:0000187!5.01e-07!54;CL:0000680!5.43e-07!57;CL:0000056!5.43e-07!57;CL:0000355!5.43e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000349;8.56e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.28e-12,250;CL:0000057,4.56e-09,76;CL:0000192,9.76e-08,43;CL:0000514,9.76e-08,43;CL:0000187,2.25e-07,55;CL:0000680,2.47e-07,58;CL:0000056,2.47e-07,58;CL:0000355,2.47e-07,58;CL:0000222,3.32e-07,121;CL:0000349,8.01e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019= | |||
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| |||
|short_description=p1@SNX33 | |||
}} |
Revision as of 08:19, 11 September 2013
Short description: | p1@SNX33 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SNX33_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000308527_5end |
EntrezGene: | SNX33 |
HGNC: | 28468 |
UniProt: | Q8WV41 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.28e-12 | 250 |
fibroblast | 4.56e-09 | 76 |
smooth muscle cell | 9.76e-08 | 43 |
smooth muscle myoblast | 9.76e-08 | 43 |
muscle cell | 2.25e-07 | 55 |
muscle precursor cell | 2.47e-07 | 58 |
myoblast | 2.47e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.47e-07 | 58 |
mesodermal cell | 3.32e-07 | 121 |
extraembryonic cell | 8.01e-07 | 19 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.