FFCP PHASE1:Hg19::chr17:38498594..38498661,+: Difference between revisions
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{{FFCP | 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02246618,0,0.982631505060581,10.4977821214102,1.2832141077495,2.34323429584154,0.826747186004736,1.77564268542939,1.09394961803644,3.83780436800028,11.9090682813431,0.175871244359621,0.383287282918786,0.535701835878287,0.336283722218824,1.21393120847326,2.95960848756687,3.28198769601764,0,4.28720023593546,0.883606528698812,1.51277379194553,0.590969204419841,0,6.43643361374215,1.57115589916002,1.12108865325516,7.30526976407596,9.50081401361934,0,9.64933346384861,0.47404083519818,0.23248285073625,3.47716544605159,0,0.207216164163037,0,0,4.30227358820278,0.473328002922261,1.02256085710989,11.854837405346,2.97838929107265,0,0,0,0.588901401691458,3.65753774946808,4.53200186031526,6.15976841137482,8.11870101936739,2.91426595835484,0,0.198950775161368,0.713520544665411,0.11294608203896,0.439762066981716,0,39.8990397418074,15.0806096747731,2.35158648180761,4.4126697915703,0,1.17785080268967,0.594092800654172,5.4945244585842,8.49635573439084,10.8081505676832,12.7626618187683,0,0,0,0,3.65168194123259,3.21110498383179,2.00675416412032,2.20880187070458,1.35982980381829,0.872701380680755,17.4578857370082,7.06790534516827,10.1678638298912,13.4114234258375,0.126166424835079,0,1.77377901416012,0,0,0,0,7.35053372716922,6.96706738406064,1.65833887891756,0.517164979309476,4.90438158372256,4.04709533488359,0.645889098360061,2.29676442894674,1.56984607612859,4.39165392119338,6.2656328577048,6.31378568901188,4.10679961302337,2.82878622661268,7.38738715544566,7.65118820055831,1.70946864083046,0.533636729388577,1.9307228228694,2.15580485055809,2.34640942403454,6.11207220914332,3.25516942652591,2.66302709674205,9.05732071159618,0|short_description=p2@RARA}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5914 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9864 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000394081_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_RARA_5end | |||
|id=chr17:38498594..38498661,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.30e-24!42;CL:0000860!1.49e-20!45;CL:0000766!6.45e-18!76;CL:0000557!1.31e-14!71;CL:0002009!2.03e-13!65;CL:0002194!2.02e-12!63;CL:0000576!2.02e-12!63;CL:0000040!2.02e-12!63;CL:0000559!2.02e-12!63;CL:0000839!2.56e-12!70;CL:0000222!9.50e-12!119;CL:0000213!1.03e-07!57;CL:0000215!1.03e-07!57;CL:0000183!2.07e-07!59;CL:0000094!6.56e-07!8;CL:0000115!6.76e-07!35;CL:0002393!9.78e-07!9;CL:0002397!9.78e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.92e-18;33!CL:0002057;2.92e-18;33!CL:0000576;2.34e-13;48!CL:0000473;2.06e-12;39!CL:0000234;2.06e-12;39!CL:0000766;1.79e-10;69!CL:0000094;3.88e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.61e-25,42;CL:0002057,1.61e-25,42;CL:0000766,4.43e-21,72;CL:0000473,6.31e-21,48;CL:0000234,6.31e-21,48;CL:0000557,2.10e-17,67;CL:0002009,3.57e-16,61;CL:0002194,4.62e-15,59;CL:0000576,4.62e-15,59;CL:0000040,4.62e-15,59;CL:0000559,4.62e-15,59;CL:0000839,8.55e-15,66;CL:0000222,1.86e-12,121;CL:0000048,2.67e-08,427;CL:0000763,5.03e-08,108;CL:0000049,5.03e-08,108;CL:0000213,1.01e-07,58;CL:0000215,1.01e-07,58;CL:0000723,1.31e-07,433;CL:0000034,3.27e-07,441;CL:0000115,3.97e-07,36;CL:0000094,4.03e-07,8;CL:0002393,6.11e-07,9;CL:0002397,6.11e-07,9;CL:0000187,9.06e-07,55 | |||
|ontology_enrichment_development_v019=CL:0002057;1.73e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001009;6.46e-07;112!UBERON:0004535;8.44e-07;109 | |||
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| |||
|short_description=p2@RARA | |||
}} |
Revision as of 13:26, 11 September 2013
Short description: | p2@RARA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_RARA_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000394081_5end |
EntrezGene: | RARA |
HGNC: | 9864 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.61e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.61e-25 | 42 |
myeloid leukocyte | 4.43e-21 | 72 |
defensive cell | 6.31e-21 | 48 |
phagocyte | 6.31e-21 | 48 |
granulocyte monocyte progenitor cell | 2.10e-17 | 67 |
macrophage dendritic cell progenitor | 3.57e-16 | 61 |
monopoietic cell | 4.62e-15 | 59 |
monocyte | 4.62e-15 | 59 |
monoblast | 4.62e-15 | 59 |
promonocyte | 4.62e-15 | 59 |
myeloid lineage restricted progenitor cell | 8.55e-15 | 66 |
mesodermal cell | 1.86e-12 | 121 |
multi fate stem cell | 2.67e-08 | 427 |
myeloid cell | 5.03e-08 | 108 |
common myeloid progenitor | 5.03e-08 | 108 |
lining cell | 1.01e-07 | 58 |
barrier cell | 1.01e-07 | 58 |
somatic stem cell | 1.31e-07 | 433 |
stem cell | 3.27e-07 | 441 |
endothelial cell | 3.97e-07 | 36 |
granulocyte | 4.03e-07 | 8 |
intermediate monocyte | 6.11e-07 | 9 |
CD14-positive, CD16-positive monocyte | 6.11e-07 | 9 |
muscle cell | 9.06e-07 | 55 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.