FFCP PHASE1:Hg19::chr12:6658245..6658318,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25900 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24970 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y4M3,Q6P593 | |||
|association_with_transcript=0bp_to_ENST00000396830,uc001qoz.1,uc001qpa.1,uc001qpg.2_5end | |||
|description=CAGE_peak_2_at_IFFO1_5end | |||
|id=chr12:6658245..6658318,- | |||
|ontology_enrichment_celltype=CL:0000055!1.70e-30!180;CL:0000057!1.91e-22!75;CL:0000048!5.44e-20!430;CL:0000723!1.10e-18!436;CL:0000034!2.23e-16!444;CL:0000680!3.37e-15!57;CL:0000056!3.37e-15!57;CL:0000355!3.37e-15!57;CL:0000187!2.90e-14!54;CL:0000183!3.26e-14!59;CL:0000192!6.30e-12!42;CL:0000514!6.30e-12!42;CL:0002057!7.32e-12!42;CL:0000393!9.63e-12!60;CL:0000211!9.63e-12!60;CL:0002371!7.37e-11!591;CL:0002620!8.47e-11!23;CL:0000359!2.76e-10!32;CL:0000860!9.65e-10!45;CL:0002320!1.23e-09!365;CL:0000144!5.49e-09!625;CL:0000222!6.21e-09!119;CL:0000134!1.24e-08!358;CL:0002334!4.43e-07!12;CL:0000219!4.62e-07!390;CL:0002194!7.34e-07!63;CL:0000576!7.34e-07!63;CL:0000040!7.34e-07!63;CL:0000559!7.34e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.66e-16;33!CL:0002057;8.66e-16;33!CL:0000473;6.68e-13;39!CL:0000234;6.68e-13;39!CL:0002620;4.70e-12;23!CL:0000359;7.55e-11;32!CL:0000192;5.86e-10;43!CL:0000057;6.98e-10;73!CL:0000187;4.83e-09;55!CL:0000134;1.62e-08;55!CL:0002320;3.84e-08;188!CL:0002334;7.62e-08;12!CL:0000048;9.52e-08;58!CL:0000723;9.70e-08;61!CL:0000393;1.84e-07;61!CL:0000211;1.84e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.31e-27,427;CL:0000723,2.67e-26,433;CL:0000057,3.31e-26,76;CL:0000034,3.44e-24,441;CL:0000680,2.36e-17,58;CL:0000056,2.36e-17,58;CL:0000355,2.36e-17,58;CL:0000187,2.75e-16,55;CL:0002320,1.07e-14,361;CL:0000393,1.07e-13,61;CL:0000211,1.07e-13,61;CL:0000192,1.27e-13,43;CL:0000514,1.27e-13,43;CL:0000134,2.43e-13,354;CL:0000473,3.56e-12,48;CL:0000234,3.56e-12,48;CL:0002620,4.57e-12,23;CL:0000860,5.03e-12,42;CL:0002057,5.03e-12,42;CL:0000359,1.75e-11,32;CL:0000219,1.37e-10,386;CL:0000222,3.78e-08,121;CL:0002194,3.89e-08,59;CL:0000576,3.89e-08,59;CL:0000040,3.89e-08,59;CL:0000559,3.89e-08,59;CL:0002334,7.66e-08,12;CL:0002009,2.06e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;5.86e-10;43!CL:0000355;1.27e-09;58!CL:0002057;1.71e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;3.57e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.38e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002204!2.73e-20!167;UBERON:0000914!4.15e-18!83;UBERON:0002329!4.15e-18!83;UBERON:0003077!4.15e-18!83;UBERON:0003059!4.15e-18!83;UBERON:0007282!4.15e-18!83;UBERON:0009618!4.15e-18!83;UBERON:0007285!4.15e-18!83;UBERON:0004290!4.01e-17!70;UBERON:0001134!4.41e-15!61;UBERON:0002036!4.41e-15!61;UBERON:0003082!4.41e-15!61;UBERON:0002385!1.82e-14!63;UBERON:0001015!1.82e-14!63;UBERON:0000383!1.82e-14!63;UBERON:0000486!1.43e-13!82;UBERON:0003081!2.01e-12!216;UBERON:0001637!5.36e-12!42;UBERON:0003509!5.36e-12!42;UBERON:0004572!5.36e-12!42;UBERON:0000468!2.57e-11!659;UBERON:0004872!2.83e-11!84;UBERON:0004573!5.95e-11!33;UBERON:0004571!5.95e-11!33;UBERON:0000467!6.75e-11!625;UBERON:0000480!1.12e-10!626;UBERON:0002384!3.86e-10!375;UBERON:0002049!4.92e-09!79;UBERON:0007798!4.92e-09!79;UBERON:0004535!1.57e-08!110;UBERON:0001981!1.76e-08!60;UBERON:0007500!1.76e-08!60;UBERON:0004537!1.76e-08!60;UBERON:0006965!1.76e-08!60;UBERON:0001009!2.18e-08!113;UBERON:0000055!2.61e-08!69;UBERON:0005256!1.47e-07!143;UBERON:0000947!1.73e-07!21;UBERON:0010191!1.73e-07!21;UBERON:0000479!6.41e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.12e-11;33!UBERON:0004571;5.12e-11;33!UBERON:0001637;5.62e-09;42!UBERON:0003509;5.62e-09;42!UBERON:0004572;5.62e-09;42!UBERON:0000947;4.45e-08;21!UBERON:0010191;4.45e-08;21!UBERON:0002385;1.03e-07;31!UBERON:0001015;1.03e-07;31!UBERON:0000383;1.03e-07;31!UBERON:0002384;1.13e-07;198!UBERON:0001013;6.31e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,4.96e-24,167;UBERON:0000926,4.34e-22,315;UBERON:0004120,4.34e-22,315;UBERON:0006603,4.34e-22,315;UBERON:0007524,6.44e-20,73;UBERON:0003077,8.64e-20,72;UBERON:0007285,8.64e-20,72;UBERON:0002329,1.51e-19,71;UBERON:0003059,1.51e-19,71;UBERON:0007282,1.51e-19,71;UBERON:0004290,1.51e-19,71;UBERON:0009618,1.51e-19,71;UBERON:0001134,3.21e-17,62;UBERON:0002036,3.21e-17,62;UBERON:0003082,3.21e-17,62;UBERON:0007503,4.98e-17,78;UBERON:0002385,5.67e-16,64;UBERON:0001015,5.67e-16,64;UBERON:0000383,5.67e-16,64;UBERON:0000486,1.56e-15,83;UBERON:0002384,3.74e-15,371;UBERON:0003081,5.00e-13,203;UBERON:0001637,1.28e-12,42;UBERON:0003509,1.28e-12,42;UBERON:0004572,1.28e-12,42;UBERON:0004573,6.90e-12,33;UBERON:0004571,6.90e-12,33;UBERON:0004872,1.12e-09,83;UBERON:0005256,7.08e-09,122;UBERON:0000479,1.23e-08,773;UBERON:0002199,2.14e-08,46;UBERON:0002416,2.14e-08,46;UBERON:0001434,5.47e-08,100;UBERON:0000947,5.91e-08,21;UBERON:0010191,5.91e-08,21;UBERON:0002049,2.01e-07,78;UBERON:0007798,2.01e-07,78;UBERON:0007500,2.04e-07,59;UBERON:0001981,2.04e-07,59;UBERON:0004537,2.04e-07,59;UBERON:0006965,2.04e-07,59;UBERON:0000923,2.20e-07,560;UBERON:0010316,2.20e-07,560;UBERON:0005291,2.20e-07,560;UBERON:0006598,2.20e-07,560;UBERON:0010317,2.20e-07,560;UBERON:0002532,2.20e-07,560;UBERON:0002097,3.83e-07,41;UBERON:0002050,4.08e-07,564;UBERON:0004535,4.96e-07,109;UBERON:0001013,5.34e-07,14;UBERON:0000055,6.68e-07,68;UBERON:0002371,8.67e-07,76 | |||
|phase1_expression=19.257908202679,11.1332272423311,24.244157504507,10.007329835313,15.1966772105278,18.3191090061077,5.06599756336621,8.2123583545488,4.96252693579693,0.491467873003018,0.697801167972428,1.96597234917155,3.9565046734268,10.7676727075241,6.62794751455832,19.4974292471015,20.4916139528152,24.1002329827833,20.4931775492013,1.96993692922861,2.65200898617529,2.5076377718247,0.85870796139317,1.91624195102038,0.753255837568817,0,0,0,0.786728553697808,0.767658796194425,1.23852898652861,0.919421224478927,1.204823675113,1.10926203050036,0,0,0,2.21598163412751,2.20598892217156,1.08505435357926,0.447830948479849,0.32389366601898,2.06060454107349,21.9551340557143,30.2300754951048,19.1641408338375,25.5671940596253,27.9594163854842,20.4406204790768,20.7138522471948,35.3501775010159,12.2970759542064,6.55016793399575,6.45484683583826,5.41705946377367,19.3889609728883,24.2886473551483,16.4048143644912,15.610278510916,23.7487480036309,12.1474053901818,29.3567657166177,34.5072127685423,17.9014395223732,12.7692064996577,22.1280237629545,7.4738669879469,22.6123798731069,34.9393555341535,19.9813737128707,10.8971910474006,18.0456041633907,7.27863491114034,0.211255286311942,0.425208599930087,0.419317291016752,2.3589012540764,2.4028302854641,1.76798145366788,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0.520237390239513,0.164437904603676,0.276350017785848,0,0.444859689486181,0,0,0.113309342697566,0,0,0.253019692019503,0,0.651083453856419,0,0.150575119077773,0,0,0,0,0.403213486449465,0,0.289648807765598,21.9426179682566,2.01210257911091,1.79007586580942,9.75885711438329,20.0535164254356,8.11140506180613,10.3387173116643,3.89307896242109,1.89069634328136,1.10864698731282,0.527008714158756,1.5062593682237,0,0.370784442784429,0,0,0,0,0,0,3.18019851786728,2.58070378531837,4.85996702250632,5.08777147731609,2.51699661725944,0.825354125820202,1.46296476575767,1.29208379584664,1.06729878806013,0.33472061276467,2.81980521976403,0.760272105718513,0.732186172644509,2.20597848207521,3.24056779152704,0.357198913136319,0,0.450445921933289,0,0.949265659568129,1.28241220751285,0,0,0.872188104285069,38.7638122322348,9.3706578631789,26.2170178010173,33.5598846276112,12.0587249947441,5.04609840128076,5.33744978648525,3.20667812942308,8.09148692039392,4.04132016209064,3.92308567472301,1.96764655938411,2.88087962239999,1.40592859100278,11.5499228427219,6.27519003698894,14.1976246524211,4.81481444439436,3.0755859429945,4.3539750077697,7.14539599392126,1.84251475967652,7.54278202583088,5.94001428641027,12.3633464639278,24.5743567723267,21.5585442544872,2.52504170931099,2.62748891731125,6.37247465613621,17.9980824561144,13.1789752193578,15.1740439495663,2.94923676216055,19.3740806543971,10.8914268297469,19.7096668078393,21.9066500141614,17.8280875582499,32.2050675057036,22.706256472454,27.1729894908439,15.687357830953,16.6606291001116,28.4434186804705,33.2990877046753,24.850671476163,11.485739197951,9.83451435400828,0.773043412653187,1.90922284413584,0.573609190778008,0,0,0,0,0,0,4.69348596989448,5.78916844373597,9.66944449467364,22.754028473567,22.3782639317572,0,0,0,0,0,0,0,0,0,0,1.40241773803446,9.0546282492908,5.88034845542168,0,0,0,0,0,2.40194934417936,0,0,0.100528972411631,1.20364978706088,0.651616610620649,13.5191522086345,1.44331342025273,0.811512834825538,5.51820862908362,1.58803092537181,0.462985512576611,0.380508304469197,0,0,2.21595305478658,2.34004265139238,2.67536092119711,0.93733833986777,0,0,0,0,0,0,0.176096868026452,0.207328115540772,0.288239906833923,0,0.063497894292169,0,0,1.71072446022705,0.308482478109971,0,0,6.2793407233402,1.30788020649984,4.6936502925408,13.0564432915356,143.062578340753,4.22651376278,22.8706780262989,19.7614130131596,2.05765899409714,5.67396528093113,2.66422179016099,3.28849385413739,3.7983512377401,0.823240336780769,2.93162565864362,2.48774364119782,0,13.5647719676814,7.84380112740265,12.3966509065751,1.2162378064119,1.00451418286425,8.43335757932127,7.42837052023906,3.44585807502342,41.3647024618083,7.81819056004928,7.19167128926342,13.2505112797523,0,0,0.215627574859517,0.128343036279748,0.76228387266739,1.30139853857622,1.54657762555539,0.167516265334349,1.27587750330633,0,0,0,4.2942022101699,7.50255781589516,5.15403545029498,13.5181059995025,15.3448930365559,13.7201101079523,16.8683637589507,9.63027519128701,2.27407504055985,9.31257641632544,3.32112799267718,5.53107505625109,7.29822361531896,5.286631251494,1.71571711905428,1.03384013061444,1.2942852049117,0.74709290462411,2.72814814301633,1.66435439510497,2.41912234663744,33.4945540555349,25.3212255925303,13.4716845327875,24.6027166570946,20.4682899626681,15.6028303509299,28.1994326245483,5.85996836450091,14.5600614756764,10.2658945017261,21.8086860257121,8.13472649219715,0,0,0,1.49258782613989,5.64482620820823,6.55622074797121,1.35359883872224,0.770153371044148,0.784349769176855,0,0.105551628892876,0,1.36074964221213,0.647747748306418,0,1.35473218771926,2.0067590954194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| |||
|short_description=p2@IFFO1 | |||
}} |
Revision as of 11:42, 11 January 2014
Short description: | p2@IFFO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IFFO1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000396830, uc001qoz.1, uc001qpa.1, uc001qpg.2_5end |
EntrezGene: | IFFO1 |
HGNC: | 24970 |
UniProt: | Q9Y4M3Q6P593 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.31e-27 | 427 |
somatic stem cell | 2.67e-26 | 433 |
fibroblast | 3.31e-26 | 76 |
stem cell | 3.44e-24 | 441 |
muscle precursor cell | 2.36e-17 | 58 |
myoblast | 2.36e-17 | 58 |
multi-potent skeletal muscle stem cell | 2.36e-17 | 58 |
muscle cell | 2.75e-16 | 55 |
connective tissue cell | 1.07e-14 | 361 |
electrically responsive cell | 1.07e-13 | 61 |
electrically active cell | 1.07e-13 | 61 |
smooth muscle cell | 1.27e-13 | 43 |
smooth muscle myoblast | 1.27e-13 | 43 |
mesenchymal cell | 2.43e-13 | 354 |
defensive cell | 3.56e-12 | 48 |
phagocyte | 3.56e-12 | 48 |
skin fibroblast | 4.57e-12 | 23 |
classical monocyte | 5.03e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.03e-12 | 42 |
vascular associated smooth muscle cell | 1.75e-11 | 32 |
motile cell | 1.37e-10 | 386 |
mesodermal cell | 3.78e-08 | 121 |
monopoietic cell | 3.89e-08 | 59 |
monocyte | 3.89e-08 | 59 |
monoblast | 3.89e-08 | 59 |
promonocyte | 3.89e-08 | 59 |
preadipocyte | 7.66e-08 | 12 |
macrophage dendritic cell progenitor | 2.06e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.38e-07 | 14 |