FFCP PHASE1:Hg19::chr14:91932629..91932652,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=55671 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20219 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=46bp_to_ENST00000555718_5end | |||
|coexpression_cluster_id=C160 | |||
|description=CAGE_peak_14_at_SMEK1_5end | |||
|id=chr14:91932629..91932652,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000775;2.19e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,2.19e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006222;3.25e-19;1!UBERON:0007297;1.57e-10;2!UBERON:0006241;2.79e-07;3!UBERON:0003057;2.79e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002298!2.85e-13!8;UBERON:0007023!5.45e-13!115;UBERON:0001049!9.18e-12!57;UBERON:0005068!9.18e-12!57;UBERON:0006241!9.18e-12!57;UBERON:0007135!9.18e-12!57;UBERON:0003076!1.25e-11!15;UBERON:0003057!1.25e-11!15;UBERON:0001896!2.45e-10!3;UBERON:0005290!2.45e-10!3;UBERON:0010096!2.45e-10!3;UBERON:0002346!1.32e-09!90;UBERON:0000988!2.31e-09!3;UBERON:0003075!3.01e-09!86;UBERON:0007284!3.01e-09!86;UBERON:0004733!1.44e-08!12;UBERON:0002028!1.44e-08!12;UBERON:0007277!1.44e-08!12;UBERON:0002616!1.52e-08!59;UBERON:0002308!3.77e-08!9;UBERON:0000125!3.77e-08!9;UBERON:0005743!4.98e-08!86;UBERON:0004732!7.60e-08!13;UBERON:0001017!1.04e-07!82;UBERON:0000073!1.07e-07!94;UBERON:0001016!1.07e-07!94;UBERON:0002148!2.65e-07!2;UBERON:0009662!2.65e-07!2;UBERON:0000369!3.84e-07!4;UBERON:0002435!3.84e-07!4;UBERON:0000204!3.84e-07!4;UBERON:0010082!3.84e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;9.52e-75;6!UBERON:0001896;7.22e-55;3!UBERON:0005290;7.22e-55;3!UBERON:0004733;1.43e-37;12!UBERON:0002028;1.43e-37;12!UBERON:0002148;1.42e-36;2!UBERON:0006331;1.42e-36;2!UBERON:0009662;1.42e-36;2!UBERON:0004732;1.05e-34;13!UBERON:0000988;8.94e-25;3!UBERON:0001301;1.08e-19;1!UBERON:0002336;3.25e-19;1!UBERON:0011215;3.25e-19;1!UBERON:0001018;3.25e-19;1!UBERON:0002473;3.25e-19;1!UBERON:0005340;3.25e-19;1!UBERON:0003544;3.25e-19;1!UBERON:0005970;3.25e-19;1!UBERON:0002316;3.25e-19;1!UBERON:0001020;3.25e-19;1!UBERON:0002437;3.25e-19;1!UBERON:0000073;8.59e-12;53!UBERON:0002616;8.59e-12;53!UBERON:0005162;2.72e-10;2!UBERON:0000122;2.72e-10;2!UBERON:0002680;6.35e-09;9!UBERON:0000125;6.35e-09;9!UBERON:0002308;6.35e-09;9!UBERON:0001895;6.35e-09;9!UBERON:0006947;1.93e-07;3!UBERON:0004054;1.93e-07;3!UBERON:0002240;2.79e-07;3!UBERON:0005174;2.79e-07;3!UBERON:0001137;2.79e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,1.11e-74,6;UBERON:0001896,6.02e-55,3;UBERON:0005290,6.02e-55,3;UBERON:0010096,6.02e-55,3;UBERON:0003076,7.13e-43,15;UBERON:0003057,7.13e-43,15;UBERON:0004733,1.54e-37,12;UBERON:0002028,1.54e-37,12;UBERON:0007277,1.54e-37,12;UBERON:0002148,2.04e-36,2;UBERON:0006331,2.04e-36,2;UBERON:0009662,2.04e-36,2;UBERON:0004732,1.12e-34,13;UBERON:0000988,1.14e-24,3;UBERON:0001049,8.96e-20,56;UBERON:0005068,8.96e-20,56;UBERON:0006241,8.96e-20,56;UBERON:0007135,8.96e-20,56;UBERON:0001301,1.08e-19,1;UBERON:0002336,2.25e-19,1;UBERON:0011215,2.25e-19,1;UBERON:0001018,2.25e-19,1;UBERON:0002473,2.25e-19,1;UBERON:0005340,2.25e-19,1;UBERON:0003544,2.25e-19,1;UBERON:0005970,2.25e-19,1;UBERON:0002316,2.25e-19,1;UBERON:0001020,2.25e-19,1;UBERON:0002437,2.25e-19,1;UBERON:0000073,4.41e-16,53;UBERON:0002616,4.41e-16,53;UBERON:0001017,1.88e-13,81;UBERON:0003075,1.88e-13,82;UBERON:0007284,1.88e-13,82;UBERON:0002346,8.21e-13,86;UBERON:0000955,2.43e-12,68;UBERON:0006238,2.43e-12,68;UBERON:0001016,4.33e-12,89;UBERON:0010371,1.56e-10,104;UBERON:0005162,2.27e-10,2;UBERON:0000122,2.27e-10,2;UBERON:0007023,1.07e-09,114;UBERON:0002680,6.88e-09,9;UBERON:0000125,6.88e-09,9;UBERON:0002308,6.88e-09,9;UBERON:0001895,6.88e-09,9;UBERON:0010092,6.88e-09,9;UBERON:0010314,3.35e-08,132;UBERON:0006947,1.93e-07,3;UBERON:0004054,1.93e-07,3;UBERON:0002240,2.97e-07,3;UBERON:0005174,2.97e-07,3;UBERON:0001137,2.97e-07,3;UBERON:0000025,5.66e-07,192 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0.309706370895104,0,0,0,0,0.645484683583826,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0.786021525498329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0.228234679033192,0.156679895773023,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0.251932747854276,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0.844175070377856,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55022605855557,0,1.63985112007737,0,0,0,0,0,0.91821828489147,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,6.63961339319714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0,0,0.196854963029498,0,0,0.408610218334727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,1.16354660725395,1.45455861916959,0,0,0,0.157204305099666,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,10.3213655224213,5.43552352530576,1.4903136705932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.578063025868136,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0.115525666150338,0,0,0,0.601682626794058,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.171488009437418,0.0679697329768317,0,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,1.2679671827502,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0.535928260312357,0,0.517164979309476,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | |||
|short_description=p14@SMEK1 | |||
}} |
Revision as of 21:30, 11 January 2014
Short description: | p14@SMEK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_SMEK1_5end |
Coexpression cluster: | C160_medulla_Hepatocyte_retina_corpus_liver_pineal_cerebral |
Association with transcript: | 46bp_to_ENST00000555718_5end |
EntrezGene: | SMEK1 |
HGNC: | 20219 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 2.19e-07 | 3 |