FFCP PHASE1:Mm9::chr13:54851269..54851281,-: Difference between revisions
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{{FFCP|EntrezGene=26913|HGNC=|MCL_coexpression_id=22|UniProt=Q3UNH4|association_with_transcript=-34bp_to_ENSMUST00000135343_5end|description=CAGE_peak_4_at_Gprin1_5end|id=chr13:54851269..54851281,-|ontology_enrichment_celltype=CL:0000117!2.77e-14!23;CL:0000337!2.77e-14!23;CL:0000540!5.53e-12!33;CL:0000047!5.53e-12!33;CL:0000031!5.53e-12!33;CL:0000404!5.53e-12!33;CL:0000393!3.51e-09!39;CL:0000211!3.51e-09!39;CL:0002319!8.40e-09!43;CL:0000221!2.25e-08!44;CL:0000133!2.25e-08!44|ontology_enrichment_celltype_v019_2=CL:0000117,7.31e-26,23;CL:0000337,7.31e-26,23;CL:0000540,5.09e-17,33;CL:0000047,5.09e-17,33;CL:0000031,5.09e-17,33;CL:0000404,5.09e-17,33;CL:0000393,6.81e-14,39;CL:0000211,6.81e-14,39;CL:0002319,2.70e-12,43;CL:0000221,6.09e-12,44;CL:0000133,6.09e-12,44;CL:0000120,3.15e-10,3;CL:0002613,7.12e-10,3;CL:0002612,1.69e-09,3;CL:0002609,1.89e-07,6;CL:0002611,9.82e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.94e-31!71;UBERON:0003075!2.94e-31!71;UBERON:0007284!2.94e-31!71;UBERON:0004121!1.06e-26!102;UBERON:0000924!1.06e-26!102;UBERON:0006601!1.06e-26!102;UBERON:0001049!2.34e-25!52;UBERON:0005068!2.34e-25!52;UBERON:0006241!2.34e-25!52;UBERON:0007135!2.34e-25!52;UBERON:0000073!6.34e-25!75;UBERON:0001016!6.34e-25!75;UBERON:0001017!2.12e-24!73;UBERON:0005743!2.12e-24!73;UBERON:0003056!1.01e-23!49;UBERON:0000033!4.57e-22!63;UBERON:0000955!4.43e-21!50;UBERON:0006238!4.43e-21!50;UBERON:0002616!3.37e-20!49;UBERON:0003080!5.12e-20!40;UBERON:0002780!2.75e-19!39;UBERON:0001890!2.75e-19!39;UBERON:0006240!2.75e-19!39;UBERON:0002020!7.59e-19!34;UBERON:0002791!1.15e-14!29;UBERON:0003528!1.15e-14!29;UBERON:0001893!1.15e-14!29;UBERON:0007811!1.23e-11!86;UBERON:0000153!9.91e-11!94;UBERON:0000956!2.17e-09!21;UBERON:0001869!2.17e-09!21;UBERON:0000203!2.17e-09!21;UBERON:0002619!6.33e-07!17;UBERON:0002420!8.91e-07!8;UBERON:0007245!8.91e-07!8;UBERON:0010009!8.91e-07!8;UBERON:0010011!8.91e-07!8;UBERON:0000454!8.91e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.73e-26,34;UBERON:0002346,9.05e-25,64;UBERON:0003075,9.05e-25,64;UBERON:0007284,9.05e-25,64;UBERON:0001049,3.31e-24,52;UBERON:0005068,3.31e-24,52;UBERON:0006241,3.31e-24,52;UBERON:0007135,3.31e-24,52;UBERON:0001017,1.03e-23,73;UBERON:0000073,3.95e-23,54;UBERON:0001016,6.15e-23,75;UBERON:0004121,7.68e-22,95;UBERON:0000924,7.68e-22,95;UBERON:0006601,7.68e-22,95;UBERON:0010371,4.59e-21,73;UBERON:0003056,1.57e-18,49;UBERON:0000955,1.07e-17,47;UBERON:0006238,1.07e-17,47;UBERON:0003080,1.24e-16,40;UBERON:0003528,3.55e-16,29;UBERON:0002791,3.55e-16,29;UBERON:0001893,3.55e-16,29;UBERON:0002616,5.55e-16,46;UBERON:0010314,1.29e-15,92;UBERON:0002780,3.87e-15,39;UBERON:0001890,3.87e-15,39;UBERON:0006240,3.87e-15,39;UBERON:0001948,1.31e-14,5;UBERON:0002315,1.31e-14,5;UBERON:0002240,4.00e-12,6;UBERON:0005174,4.00e-12,6;UBERON:0001137,4.00e-12,6;UBERON:0000956,2.03e-11,21;UBERON:0001869,2.03e-11,21;UBERON:0000203,2.03e-11,21;UBERON:0000369,1.19e-09,5;UBERON:0002435,1.19e-09,5;UBERON:0000204,1.19e-09,5;UBERON:0010082,1.19e-09,5;UBERON:0002257,1.69e-09,3;UBERON:0002619,3.00e-09,17;UBERON:0000025,2.18e-08,114;UBERON:0003076,2.62e-08,12;UBERON:0003057,2.62e-08,12;UBERON:0004111,1.61e-07,122;UBERON:0002021,6.28e-07,10;UBERON:0000411,6.28e-07,10;UBERON:0001950,6.28e-07,10;UBERON:0002256,9.82e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,5.46254444320914,5.81890077199236,4.43681982454325,0.677689064138264,0,0,0,0,0,0,0.725827286159344,1.75507719831198,1.68259969081106,1.71390590642282,2.42955395046775,1.10241719293459,1.72521847832825,0,0,0.127687338085188,0.46081959976873,7.78129097608144,6.86157327018072,1.56274011167028,0.558365998002762,0.56276261003168,0.763991238884051,2.94628585473668,1.28134512719193,4.47358669980721,0.302904773332736,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0.867426633830679,0.608930956624282,0.230615497256059,0.150722640552623,0.587943535678524,0.251333182659351,0,0,0,0.161766849947409,0,0,0,0.878342391034642,2.30391377494801,0,0,0,0,1.04853447583376,0.457500602818626,1.13088916901578,0.521472960576829,1.02286182932132,0.62336413367868,0.162241263067758,0.101839363850316,0,0,0,0.260240885925407,0.229902104433473,0.720248519221397,0.452114453507145,1.90502197623718,1.5373646434182,1.12442069471675,0.517406741478031,0.215567992932842,0,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,1.13195073617213,0,0,0,0,0,0.403367049246685,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0,0,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0,0,0.321101179975584,0,0,0.252470927204373,0.315508219416257,0,0,0,0.222798674082394,0,0.404810701674894,0.584511715822624,0.395287777946524,4.17717711348349,0,0,0.325773918707152,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0.680879211507576,0.18006109403131,0.388076051348264,1.71469628025274,0.354680467284547,0.535106452806212,0.329098041204242,1.8267896946876,0,0,0,0,0,0.120625849856312,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,1.14579102687879,0.859265911718438,2.74033007908257,1.5107877947794,2.02506750069542,0.900642406448441,0.906284817968409,2.07104124700728,0.31136204275253,1.99512436700516,0.170733605754134,0.243106717068294,0.419226325255965,0.919217542250071,0,0,0,0.505394423527595,0.50695859978048,0.565879024158229,0.37456602987953,0.384150914429216,0.229741875822453,0,0.115884325944855,0.38581844092741,0.824171801606613,0.441596760403192,0.342869252385415,0.532427418478012,0.476872379894642,0.145346416632329,0.470546902076653,0.338458431566706,0.548783918618318,0.526139422875686,0.271608227691724,0,0.355905054372522,0.394017929502254,0.409231043169689,0.464810523557898,0.578719832943424,0.749431733813838,0.467863216890817,0.214871054048298,0,0,0|short_description=p4@Gprin1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:26913 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3UNH4 | |||
|association_with_transcript=-34bp_to_ENSMUST00000135343_5end | |||
|cluster_id=chr13:54851269..54851281,- | |||
|description=CAGE_peak_4_at_Gprin1_5end | |||
|id=chr13:54851269..54851281,- | |||
|ontology_enrichment_celltype=CL:0000117!2.77e-14!23;CL:0000337!2.77e-14!23;CL:0000540!5.53e-12!33;CL:0000047!5.53e-12!33;CL:0000031!5.53e-12!33;CL:0000404!5.53e-12!33;CL:0000393!3.51e-09!39;CL:0000211!3.51e-09!39;CL:0002319!8.40e-09!43;CL:0000221!2.25e-08!44;CL:0000133!2.25e-08!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.31e-26,23;CL:0000337,7.31e-26,23;CL:0000540,5.09e-17,33;CL:0000047,5.09e-17,33;CL:0000031,5.09e-17,33;CL:0000404,5.09e-17,33;CL:0000393,6.81e-14,39;CL:0000211,6.81e-14,39;CL:0002319,2.70e-12,43;CL:0000221,6.09e-12,44;CL:0000133,6.09e-12,44;CL:0000120,3.15e-10,3;CL:0002613,7.12e-10,3;CL:0002612,1.69e-09,3;CL:0002609,1.89e-07,6;CL:0002611,9.82e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.94e-31!71;UBERON:0003075!2.94e-31!71;UBERON:0007284!2.94e-31!71;UBERON:0004121!1.06e-26!102;UBERON:0000924!1.06e-26!102;UBERON:0006601!1.06e-26!102;UBERON:0001049!2.34e-25!52;UBERON:0005068!2.34e-25!52;UBERON:0006241!2.34e-25!52;UBERON:0007135!2.34e-25!52;UBERON:0000073!6.34e-25!75;UBERON:0001016!6.34e-25!75;UBERON:0001017!2.12e-24!73;UBERON:0005743!2.12e-24!73;UBERON:0003056!1.01e-23!49;UBERON:0000033!4.57e-22!63;UBERON:0000955!4.43e-21!50;UBERON:0006238!4.43e-21!50;UBERON:0002616!3.37e-20!49;UBERON:0003080!5.12e-20!40;UBERON:0002780!2.75e-19!39;UBERON:0001890!2.75e-19!39;UBERON:0006240!2.75e-19!39;UBERON:0002020!7.59e-19!34;UBERON:0002791!1.15e-14!29;UBERON:0003528!1.15e-14!29;UBERON:0001893!1.15e-14!29;UBERON:0007811!1.23e-11!86;UBERON:0000153!9.91e-11!94;UBERON:0000956!2.17e-09!21;UBERON:0001869!2.17e-09!21;UBERON:0000203!2.17e-09!21;UBERON:0002619!6.33e-07!17;UBERON:0002420!8.91e-07!8;UBERON:0007245!8.91e-07!8;UBERON:0010009!8.91e-07!8;UBERON:0010011!8.91e-07!8;UBERON:0000454!8.91e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.73e-26,34;UBERON:0002346,9.05e-25,64;UBERON:0003075,9.05e-25,64;UBERON:0007284,9.05e-25,64;UBERON:0001049,3.31e-24,52;UBERON:0005068,3.31e-24,52;UBERON:0006241,3.31e-24,52;UBERON:0007135,3.31e-24,52;UBERON:0001017,1.03e-23,73;UBERON:0000073,3.95e-23,54;UBERON:0001016,6.15e-23,75;UBERON:0004121,7.68e-22,95;UBERON:0000924,7.68e-22,95;UBERON:0006601,7.68e-22,95;UBERON:0010371,4.59e-21,73;UBERON:0003056,1.57e-18,49;UBERON:0000955,1.07e-17,47;UBERON:0006238,1.07e-17,47;UBERON:0003080,1.24e-16,40;UBERON:0003528,3.55e-16,29;UBERON:0002791,3.55e-16,29;UBERON:0001893,3.55e-16,29;UBERON:0002616,5.55e-16,46;UBERON:0010314,1.29e-15,92;UBERON:0002780,3.87e-15,39;UBERON:0001890,3.87e-15,39;UBERON:0006240,3.87e-15,39;UBERON:0001948,1.31e-14,5;UBERON:0002315,1.31e-14,5;UBERON:0002240,4.00e-12,6;UBERON:0005174,4.00e-12,6;UBERON:0001137,4.00e-12,6;UBERON:0000956,2.03e-11,21;UBERON:0001869,2.03e-11,21;UBERON:0000203,2.03e-11,21;UBERON:0000369,1.19e-09,5;UBERON:0002435,1.19e-09,5;UBERON:0000204,1.19e-09,5;UBERON:0010082,1.19e-09,5;UBERON:0002257,1.69e-09,3;UBERON:0002619,3.00e-09,17;UBERON:0000025,2.18e-08,114;UBERON:0003076,2.62e-08,12;UBERON:0003057,2.62e-08,12;UBERON:0004111,1.61e-07,122;UBERON:0002021,6.28e-07,10;UBERON:0000411,6.28e-07,10;UBERON:0001950,6.28e-07,10;UBERON:0002256,9.82e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,5.46254444320914,5.81890077199236,4.43681982454325,0.677689064138264,0,0,0,0,0,0,0.725827286159344,1.75507719831198,1.68259969081106,1.71390590642282,2.42955395046775,1.10241719293459,1.72521847832825,0,0,0.127687338085188,0.46081959976873,7.78129097608144,6.86157327018072,1.56274011167028,0.558365998002762,0.56276261003168,0.763991238884051,2.94628585473668,1.28134512719193,4.47358669980721,0.302904773332736,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0.867426633830679,0.608930956624282,0.230615497256059,0.150722640552623,0.587943535678524,0.251333182659351,0,0,0,0.161766849947409,0,0,0,0.878342391034642,2.30391377494801,0,0,0,0,1.04853447583376,0.457500602818626,1.13088916901578,0.521472960576829,1.02286182932132,0.62336413367868,0.162241263067758,0.101839363850316,0,0,0,0.260240885925407,0.229902104433473,0.720248519221397,0.452114453507145,1.90502197623718,1.5373646434182,1.12442069471675,0.517406741478031,0.215567992932842,0,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,1.13195073617213,0,0,0,0,0,0.403367049246685,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0,0,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0,0,0.321101179975584,0,0,0.252470927204373,0.315508219416257,0,0,0,0.222798674082394,0,0.404810701674894,0.584511715822624,0.395287777946524,4.17717711348349,0,0,0.325773918707152,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0.680879211507576,0.18006109403131,0.388076051348264,1.71469628025274,0.354680467284547,0.535106452806212,0.329098041204242,1.8267896946876,0,0,0,0,0,0.120625849856312,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,1.14579102687879,0.859265911718438,2.74033007908257,1.5107877947794,2.02506750069542,0.900642406448441,0.906284817968409,2.07104124700728,0.31136204275253,1.99512436700516,0.170733605754134,0.243106717068294,0.419226325255965,0.919217542250071,0,0,0,0.505394423527595,0.50695859978048,0.565879024158229,0.37456602987953,0.384150914429216,0.229741875822453,0,0.115884325944855,0.38581844092741,0.824171801606613,0.441596760403192,0.342869252385415,0.532427418478012,0.476872379894642,0.145346416632329,0.470546902076653,0.338458431566706,0.548783918618318,0.526139422875686,0.271608227691724,0,0.355905054372522,0.394017929502254,0.409231043169689,0.464810523557898,0.578719832943424,0.749431733813838,0.467863216890817,0.214871054048298,0,0,0 | |||
|short_description=p4@Gprin1 | |||
}} |
Revision as of 03:28, 6 August 2015
Short description: | p4@Gprin1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Gprin1_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -34bp_to_ENSMUST00000135343_5end |
EntrezGene: | 26913 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.31e-26 | 23 |
neuroblast (sensu Vertebrata) | 7.31e-26 | 23 |
neuron | 5.09e-17 | 33 |
neuronal stem cell | 5.09e-17 | 33 |
neuroblast | 5.09e-17 | 33 |
electrically signaling cell | 5.09e-17 | 33 |
electrically responsive cell | 6.81e-14 | 39 |
electrically active cell | 6.81e-14 | 39 |
neural cell | 2.70e-12 | 43 |
ectodermal cell | 6.09e-12 | 44 |
neurectodermal cell | 6.09e-12 | 44 |
granule cell | 3.15e-10 | 3 |
striatum neuron | 7.12e-10 | 3 |
neuron of the ventral spinal cord | 1.69e-09 | 3 |
neuron of cerebral cortex | 1.89e-07 | 6 |
neuron of the dorsal spinal cord | 9.82e-07 | 2 |