FFCP PHASE1:Mm9::chr16:28446864..28446920,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=93|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:28446864..28446920,-|id=chr16:28446864..28446920,-|ontology_enrichment_celltype=CL:0000117!6.58e-13!23;CL:0000337!6.58e-13!23;CL:0000540!1.48e-08!33;CL:0000047!1.48e-08!33;CL:0000031!1.48e-08!33;CL:0000404!1.48e-08!33;CL:0002319!2.49e-08!43;CL:0000221!2.84e-08!44;CL:0000133!2.84e-08!44|ontology_enrichment_celltype_v019_2=CL:0000117,7.46e-20,23;CL:0000337,7.46e-20,23;CL:0000540,1.39e-11,33;CL:0000047,1.39e-11,33;CL:0000031,1.39e-11,33;CL:0000404,1.39e-11,33;CL:0000393,9.55e-09,39;CL:0000211,9.55e-09,39;CL:0002319,9.73e-09,43;CL:0000221,2.22e-08,44;CL:0000133,2.22e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!8.79e-28!63;UBERON:0001049!7.19e-27!52;UBERON:0005068!7.19e-27!52;UBERON:0006241!7.19e-27!52;UBERON:0007135!7.19e-27!52;UBERON:0001017!5.50e-26!73;UBERON:0005743!5.50e-26!73;UBERON:0000955!1.02e-25!50;UBERON:0006238!1.02e-25!50;UBERON:0002346!1.26e-25!71;UBERON:0003075!1.26e-25!71;UBERON:0007284!1.26e-25!71;UBERON:0000073!6.85e-25!75;UBERON:0001016!6.85e-25!75;UBERON:0002616!7.17e-25!49;UBERON:0003056!1.44e-23!49;UBERON:0004121!2.01e-21!102;UBERON:0000924!2.01e-21!102;UBERON:0006601!2.01e-21!102;UBERON:0002020!3.48e-20!34;UBERON:0003080!1.11e-19!40;UBERON:0002780!5.30e-19!39;UBERON:0001890!5.30e-19!39;UBERON:0006240!5.30e-19!39;UBERON:0002791!5.42e-17!29;UBERON:0003528!5.42e-17!29;UBERON:0001893!5.42e-17!29;UBERON:0000153!1.28e-15!94;UBERON:0007811!7.54e-15!86;UBERON:0000956!2.51e-12!21;UBERON:0001869!2.51e-12!21;UBERON:0000203!2.51e-12!21;UBERON:0002619!7.65e-11!17;UBERON:0002021!1.64e-08!10;UBERON:0000411!1.64e-08!10;UBERON:0001950!1.64e-08!10;UBERON:0003076!1.10e-07!12;UBERON:0003057!1.10e-07!12;UBERON:0000475!1.46e-07!200;UBERON:0000025!6.03e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.87e-35,54;UBERON:0002346,1.04e-34,64;UBERON:0003075,1.04e-34,64;UBERON:0007284,1.04e-34,64;UBERON:0001049,3.02e-33,52;UBERON:0005068,3.02e-33,52;UBERON:0006241,3.02e-33,52;UBERON:0007135,3.02e-33,52;UBERON:0002020,4.99e-30,34;UBERON:0001017,1.12e-29,73;UBERON:0001016,1.99e-28,75;UBERON:0010371,2.54e-28,73;UBERON:0000955,2.95e-28,47;UBERON:0006238,2.95e-28,47;UBERON:0003056,4.41e-27,49;UBERON:0002616,5.13e-27,46;UBERON:0004121,7.41e-27,95;UBERON:0000924,7.41e-27,95;UBERON:0006601,7.41e-27,95;UBERON:0003528,6.70e-25,29;UBERON:0002791,6.70e-25,29;UBERON:0001893,6.70e-25,29;UBERON:0003080,2.26e-23,40;UBERON:0002780,2.39e-22,39;UBERON:0001890,2.39e-22,39;UBERON:0006240,2.39e-22,39;UBERON:0010314,4.86e-19,92;UBERON:0000956,2.06e-17,21;UBERON:0001869,2.06e-17,21;UBERON:0000203,2.06e-17,21;UBERON:0002619,5.52e-15,17;UBERON:0002021,9.12e-13,10;UBERON:0000411,9.12e-13,10;UBERON:0001950,9.12e-13,10;UBERON:0003076,3.81e-10,12;UBERON:0003057,3.81e-10,12;UBERON:0000025,4.35e-10,114;UBERON:0002420,1.39e-08,8;UBERON:0007245,1.39e-08,8;UBERON:0010009,1.39e-08,8;UBERON:0010011,1.39e-08,8;UBERON:0000454,1.39e-08,8;UBERON:0004111,1.56e-08,122;UBERON:0002240,3.21e-07,6;UBERON:0005174,3.21e-07,6;UBERON:0001137,3.21e-07,6|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0.782391344348039,1.09012578190223,1.09843091367236,0.972149495371417,0.55994568650145,0,0,0,0,0,0,0,2.42779753031517,3.1739458756322,3.80298842103708,0,0,0,0,0,0.299600110518405,0.768436610643109,1.45165457231869,1.35005938331691,1.05162480675691,4.85606673486466,5.74258206474195,2.20483438586917,1.53352753629178,1.83843757322004,6.60695285996332,4.85211884723713,4.45458946443106,2.90149833006426,2.28719109006024,3.12548022334056,4.4669279840221,3.93933827022176,4.43114918552749,5.59794312399969,3.41692033917847,2.98239113320481,0,0.151143120213571,0.869593466105033,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0.5709193985953,0,0,0.173485326766136,0,0,0.301445281105245,0.23517741427141,0,0,0,0,0,0,0,0,3.51336956413857,6.28340120440365,0,0,0,0,5.09288173976397,5.94750783664214,5.52879149296603,6.77914848749878,7.41574826257959,8.93488591606108,6.65189178577806,2.34230536855727,1.7416975885413,2.77995034277042,0.841767423545896,0.910843100738926,1.60931473103431,1.80062129805349,2.71268672104287,2.38127747029647,2.69038812598185,2.52994656311268,2.06962696591213,0.431135985865684,0.378212160335639,2.28736461413134,2.41115305670332,0.556094498451196,0.696504333044333,0.205782136407943,0.59710280045548,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83666881697493,1.85228302282712,0,0,0.639864751605702,0,0,0.201683524623343,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0.569003702859245,0.571242563048644,0,0.203651327845314,0.387904974335251,0.350679099451593,0.948548056863859,0.147610147979602,0.156998727841375,0.370191491765402,0,0.166845105716094,0,0,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0,0,0,0.936113019343682,0.252578877947112,0.538192240565737,0.482443521363367,0,0,0,0.169745085775188,0,0.335012514883631,0.476087281772027,0,0.788175720530955,0.664394068946325,1.59454768657487,0.163863314715738,0,0.144649058581512,0,0,0,0,5.9403718295483,4.45404409050372,0,0,0.315508219416257,0.780877488593277,0,0.238968797952552,0,0,0,0,0.395287777946524,58.4804795887689,0.567760340833074,0.534196811001766,0.488660878060728,0.659880491890142,0,0.728341908464944,0.302323556964751,1.32023555829129,0.295301892880773,1.22974059177571,1.80899805217755,2.18120237686503,3.20847640546249,0.948110273807448,2.10837217149998,0,0.340439605753788,0.900305470156551,0.905510786479282,1.92903331528433,1.24138163549592,0.535106452806212,0.658196082408484,0.304464949114599,0,0,0,0.16488625294148,0,0.241251699712623,0.119372344003136,0.328281799490123,0,5.00648315428376,0,0.206386867963223,0,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0.813277868507395,0.324016022465404,0.836353184057875,0.655087691238533,0.269728692769641,0.330613822901344,0,0.129614973291793,0,0,0,0,0.194451188344048,0,0.506868376472335,0.117357238645754,0.651021924219751,0.104859344425711,0,0.288030006257865,0,1.41907650703115,0.718976700153791,0.129920822977795,0,0.198681354781265,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0.375364950902364,1.28206136987086,0.428736758158132,0,9.60078132449013,6.90487854760765,10.3121192419091,7.73339320546594,8.22099023724771,6.7985450765073,4.72515750162264,7.20513925158753,6.79713613476307,4.65984280576638,0.518936737920883,0.798049746802062,1.19513524027894,0.729320151204882,1.46729213839588,1.2869045591501,0.666740183404846,0.618105171716683,0.64183841918363,1.01078884705519,0.760437899670719,0.377252682772152,0.468207537349412,0.576226371643824,1.20614484806788,1.90517476513229,0.927074607558844,0.38581844092741,2.47251540481984,0.735994600671987,1.02860775715625,0.887379030796687,0.715308569841963,1.30811774969096,1.12931256498397,1.4384483341585,1.64635175585495,0.263069711437843,0.407412341537585,1.68342681497322,0.711810108745045,1.28055827088233,1.22769312950907,1.39443157067369,2.3148793317737,1.99848462350357,0.935726433781634,0.429742108096597,0.956441660344217,0,0.231867835620421|short_description=p@chr16:28446864..28446920,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=93 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:28446864..28446920,- | |||
|description=CAGE_peak_at_chr16:28446864..28446920,- | |||
|id=chr16:28446864..28446920,- | |||
|ontology_enrichment_celltype=CL:0000117!6.58e-13!23;CL:0000337!6.58e-13!23;CL:0000540!1.48e-08!33;CL:0000047!1.48e-08!33;CL:0000031!1.48e-08!33;CL:0000404!1.48e-08!33;CL:0002319!2.49e-08!43;CL:0000221!2.84e-08!44;CL:0000133!2.84e-08!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.46e-20,23;CL:0000337,7.46e-20,23;CL:0000540,1.39e-11,33;CL:0000047,1.39e-11,33;CL:0000031,1.39e-11,33;CL:0000404,1.39e-11,33;CL:0000393,9.55e-09,39;CL:0000211,9.55e-09,39;CL:0002319,9.73e-09,43;CL:0000221,2.22e-08,44;CL:0000133,2.22e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!8.79e-28!63;UBERON:0001049!7.19e-27!52;UBERON:0005068!7.19e-27!52;UBERON:0006241!7.19e-27!52;UBERON:0007135!7.19e-27!52;UBERON:0001017!5.50e-26!73;UBERON:0005743!5.50e-26!73;UBERON:0000955!1.02e-25!50;UBERON:0006238!1.02e-25!50;UBERON:0002346!1.26e-25!71;UBERON:0003075!1.26e-25!71;UBERON:0007284!1.26e-25!71;UBERON:0000073!6.85e-25!75;UBERON:0001016!6.85e-25!75;UBERON:0002616!7.17e-25!49;UBERON:0003056!1.44e-23!49;UBERON:0004121!2.01e-21!102;UBERON:0000924!2.01e-21!102;UBERON:0006601!2.01e-21!102;UBERON:0002020!3.48e-20!34;UBERON:0003080!1.11e-19!40;UBERON:0002780!5.30e-19!39;UBERON:0001890!5.30e-19!39;UBERON:0006240!5.30e-19!39;UBERON:0002791!5.42e-17!29;UBERON:0003528!5.42e-17!29;UBERON:0001893!5.42e-17!29;UBERON:0000153!1.28e-15!94;UBERON:0007811!7.54e-15!86;UBERON:0000956!2.51e-12!21;UBERON:0001869!2.51e-12!21;UBERON:0000203!2.51e-12!21;UBERON:0002619!7.65e-11!17;UBERON:0002021!1.64e-08!10;UBERON:0000411!1.64e-08!10;UBERON:0001950!1.64e-08!10;UBERON:0003076!1.10e-07!12;UBERON:0003057!1.10e-07!12;UBERON:0000475!1.46e-07!200;UBERON:0000025!6.03e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.87e-35,54;UBERON:0002346,1.04e-34,64;UBERON:0003075,1.04e-34,64;UBERON:0007284,1.04e-34,64;UBERON:0001049,3.02e-33,52;UBERON:0005068,3.02e-33,52;UBERON:0006241,3.02e-33,52;UBERON:0007135,3.02e-33,52;UBERON:0002020,4.99e-30,34;UBERON:0001017,1.12e-29,73;UBERON:0001016,1.99e-28,75;UBERON:0010371,2.54e-28,73;UBERON:0000955,2.95e-28,47;UBERON:0006238,2.95e-28,47;UBERON:0003056,4.41e-27,49;UBERON:0002616,5.13e-27,46;UBERON:0004121,7.41e-27,95;UBERON:0000924,7.41e-27,95;UBERON:0006601,7.41e-27,95;UBERON:0003528,6.70e-25,29;UBERON:0002791,6.70e-25,29;UBERON:0001893,6.70e-25,29;UBERON:0003080,2.26e-23,40;UBERON:0002780,2.39e-22,39;UBERON:0001890,2.39e-22,39;UBERON:0006240,2.39e-22,39;UBERON:0010314,4.86e-19,92;UBERON:0000956,2.06e-17,21;UBERON:0001869,2.06e-17,21;UBERON:0000203,2.06e-17,21;UBERON:0002619,5.52e-15,17;UBERON:0002021,9.12e-13,10;UBERON:0000411,9.12e-13,10;UBERON:0001950,9.12e-13,10;UBERON:0003076,3.81e-10,12;UBERON:0003057,3.81e-10,12;UBERON:0000025,4.35e-10,114;UBERON:0002420,1.39e-08,8;UBERON:0007245,1.39e-08,8;UBERON:0010009,1.39e-08,8;UBERON:0010011,1.39e-08,8;UBERON:0000454,1.39e-08,8;UBERON:0004111,1.56e-08,122;UBERON:0002240,3.21e-07,6;UBERON:0005174,3.21e-07,6;UBERON:0001137,3.21e-07,6 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0.782391344348039,1.09012578190223,1.09843091367236,0.972149495371417,0.55994568650145,0,0,0,0,0,0,0,2.42779753031517,3.1739458756322,3.80298842103708,0,0,0,0,0,0.299600110518405,0.768436610643109,1.45165457231869,1.35005938331691,1.05162480675691,4.85606673486466,5.74258206474195,2.20483438586917,1.53352753629178,1.83843757322004,6.60695285996332,4.85211884723713,4.45458946443106,2.90149833006426,2.28719109006024,3.12548022334056,4.4669279840221,3.93933827022176,4.43114918552749,5.59794312399969,3.41692033917847,2.98239113320481,0,0.151143120213571,0.869593466105033,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0.5709193985953,0,0,0.173485326766136,0,0,0.301445281105245,0.23517741427141,0,0,0,0,0,0,0,0,3.51336956413857,6.28340120440365,0,0,0,0,5.09288173976397,5.94750783664214,5.52879149296603,6.77914848749878,7.41574826257959,8.93488591606108,6.65189178577806,2.34230536855727,1.7416975885413,2.77995034277042,0.841767423545896,0.910843100738926,1.60931473103431,1.80062129805349,2.71268672104287,2.38127747029647,2.69038812598185,2.52994656311268,2.06962696591213,0.431135985865684,0.378212160335639,2.28736461413134,2.41115305670332,0.556094498451196,0.696504333044333,0.205782136407943,0.59710280045548,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83666881697493,1.85228302282712,0,0,0.639864751605702,0,0,0.201683524623343,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0.569003702859245,0.571242563048644,0,0.203651327845314,0.387904974335251,0.350679099451593,0.948548056863859,0.147610147979602,0.156998727841375,0.370191491765402,0,0.166845105716094,0,0,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0,0,0,0.936113019343682,0.252578877947112,0.538192240565737,0.482443521363367,0,0,0,0.169745085775188,0,0.335012514883631,0.476087281772027,0,0.788175720530955,0.664394068946325,1.59454768657487,0.163863314715738,0,0.144649058581512,0,0,0,0,5.9403718295483,4.45404409050372,0,0,0.315508219416257,0.780877488593277,0,0.238968797952552,0,0,0,0,0.395287777946524,58.4804795887689,0.567760340833074,0.534196811001766,0.488660878060728,0.659880491890142,0,0.728341908464944,0.302323556964751,1.32023555829129,0.295301892880773,1.22974059177571,1.80899805217755,2.18120237686503,3.20847640546249,0.948110273807448,2.10837217149998,0,0.340439605753788,0.900305470156551,0.905510786479282,1.92903331528433,1.24138163549592,0.535106452806212,0.658196082408484,0.304464949114599,0,0,0,0.16488625294148,0,0.241251699712623,0.119372344003136,0.328281799490123,0,5.00648315428376,0,0.206386867963223,0,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0.813277868507395,0.324016022465404,0.836353184057875,0.655087691238533,0.269728692769641,0.330613822901344,0,0.129614973291793,0,0,0,0,0.194451188344048,0,0.506868376472335,0.117357238645754,0.651021924219751,0.104859344425711,0,0.288030006257865,0,1.41907650703115,0.718976700153791,0.129920822977795,0,0.198681354781265,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0.375364950902364,1.28206136987086,0.428736758158132,0,9.60078132449013,6.90487854760765,10.3121192419091,7.73339320546594,8.22099023724771,6.7985450765073,4.72515750162264,7.20513925158753,6.79713613476307,4.65984280576638,0.518936737920883,0.798049746802062,1.19513524027894,0.729320151204882,1.46729213839588,1.2869045591501,0.666740183404846,0.618105171716683,0.64183841918363,1.01078884705519,0.760437899670719,0.377252682772152,0.468207537349412,0.576226371643824,1.20614484806788,1.90517476513229,0.927074607558844,0.38581844092741,2.47251540481984,0.735994600671987,1.02860775715625,0.887379030796687,0.715308569841963,1.30811774969096,1.12931256498397,1.4384483341585,1.64635175585495,0.263069711437843,0.407412341537585,1.68342681497322,0.711810108745045,1.28055827088233,1.22769312950907,1.39443157067369,2.3148793317737,1.99848462350357,0.935726433781634,0.429742108096597,0.956441660344217,0,0.231867835620421 | |||
|short_description=p@chr16:28446864..28446920,- | |||
}} |
Latest revision as of 06:34, 6 August 2015
Short description: | p@chr16:28446864..28446920, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:28446864..28446920, - |
Coexpression cluster: | MCL_coexpression_mm9:93 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.46e-20 | 23 |
neuroblast (sensu Vertebrata) | 7.46e-20 | 23 |
neuron | 1.39e-11 | 33 |
neuronal stem cell | 1.39e-11 | 33 |
neuroblast | 1.39e-11 | 33 |
electrically signaling cell | 1.39e-11 | 33 |
electrically responsive cell | 9.55e-09 | 39 |
electrically active cell | 9.55e-09 | 39 |
neural cell | 9.73e-09 | 43 |
ectodermal cell | 2.22e-08 | 44 |
neurectodermal cell | 2.22e-08 | 44 |