FFCP PHASE1:Mm9::chr1:175466116..175466161,-: Difference between revisions
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{{FFCP|EntrezGene=545384|HGNC=|MCL_coexpression_id=63|UniProt=E9PVL3,Q504N7|association_with_transcript=-28bp_to_ENSMUST00000090406,ENSMUST00000139092,ENSMUST00000170192,NM_001024721,uc007drn.2,uc007dro.2_5end|description=CAGE_peak_1_at_BC094916_5end|id=chr1:175466116..175466161,-|ontology_enrichment_celltype=CL:0002031!1.39e-21!25;CL:0000988!5.69e-16!32;CL:0002032!5.69e-16!32;CL:0000037!5.69e-16!32;CL:0000566!5.69e-16!32;CL:0000837!5.69e-16!32;CL:0000791!6.35e-16!9;CL:0000789!6.35e-16!9;CL:0002420!6.35e-16!9;CL:0002419!6.35e-16!9;CL:0000790!6.35e-16!9;CL:0000738!3.11e-15!17;CL:0002087!3.11e-15!17;CL:0000838!7.80e-15!12;CL:0000624!9.02e-14!8;CL:0000542!1.50e-13!13;CL:0000051!1.50e-13!13;CL:0000084!9.36e-13!11;CL:0000827!9.36e-13!11;CL:0000553!3.08e-10!6;CL:0000556!3.08e-10!6;CL:0002320!6.62e-10!46;CL:0000134!6.62e-10!46;CL:0000893!1.32e-09!6;CL:0002489!1.32e-09!6;CL:0000898!1.32e-09!6;CL:0000809!1.32e-09!6;CL:0000810!1.32e-09!6;CL:0000895!1.32e-09!6;CL:0000808!1.32e-09!6;CL:0000894!1.32e-09!6;CL:0000806!1.32e-09!6;CL:0000807!1.32e-09!6;CL:0000805!1.32e-09!6;CL:0002425!1.32e-09!6;CL:0002436!1.32e-09!6;CL:0002427!1.32e-09!6;CL:0002428!1.32e-09!6;CL:0002429!1.32e-09!6;CL:0002433!1.32e-09!6;CL:0002431!1.32e-09!6;CL:0002432!1.32e-09!6;CL:0000839!1.61e-08!13;CL:0000219!7.11e-08!54|ontology_enrichment_celltype_v019_2=CL:0002031,2.07e-34,25;CL:0000988,9.96e-27,32;CL:0002032,9.96e-27,32;CL:0000037,9.96e-27,32;CL:0000837,9.96e-27,32;CL:0000738,1.48e-26,17;CL:0002087,1.48e-26,17;CL:0000838,2.34e-21,12;CL:0000791,7.31e-20,9;CL:0000789,7.31e-20,9;CL:0002420,7.31e-20,9;CL:0002419,7.31e-20,9;CL:0000790,7.31e-20,9;CL:0000542,1.04e-19,13;CL:0000051,1.04e-19,13;CL:0002320,2.36e-18,46;CL:0000134,2.36e-18,46;CL:0000084,2.83e-16,11;CL:0000827,2.83e-16,11;CL:0002476,1.35e-15,2;CL:0000219,1.65e-15,54;CL:0000624,1.36e-14,8;CL:0000839,2.16e-14,13;CL:0000553,5.76e-12,6;CL:0000556,5.76e-12,6;CL:0000763,1.06e-11,16;CL:0000893,2.80e-11,6;CL:0002489,2.80e-11,6;CL:0000898,2.80e-11,6;CL:0000809,2.80e-11,6;CL:0000810,2.80e-11,6;CL:0000895,2.80e-11,6;CL:0000808,2.80e-11,6;CL:0000894,2.80e-11,6;CL:0000806,2.80e-11,6;CL:0000807,2.80e-11,6;CL:0000805,2.80e-11,6;CL:0002425,2.80e-11,6;CL:0002436,2.80e-11,6;CL:0002427,2.80e-11,6;CL:0002428,2.80e-11,6;CL:0002429,2.80e-11,6;CL:0002433,2.80e-11,6;CL:0002431,2.80e-11,6;CL:0002432,2.80e-11,6;CL:0000049,7.47e-10,19;CL:0000723,8.24e-09,91;CL:0000048,8.24e-09,91;CL:0000945,8.81e-09,1;CL:0000236,8.81e-09,1;CL:0000826,8.81e-09,1;CL:0000815,1.47e-08,1;CL:0000792,1.47e-08,1;CL:0000625,1.74e-08,1;CL:0002194,2.91e-08,4;CL:0000766,2.91e-08,4;CL:0000234,2.91e-08,4;CL:0000576,2.91e-08,4;CL:0000235,2.91e-08,4;CL:0000864,2.91e-08,4;CL:0002009,2.91e-08,4;CL:0000040,2.91e-08,4;CL:0000559,2.91e-08,4;CL:0000034,3.36e-08,97;CL:0000050,3.67e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!5.24e-20!48;UBERON:0002390!1.14e-15!45;UBERON:0003061!1.14e-15!45;UBERON:0002405!5.85e-12!70;UBERON:0003081!2.29e-10!88;UBERON:0002384!6.62e-10!46;UBERON:0004177!6.64e-10!29;UBERON:0003408!7.65e-09!24;UBERON:0002465!1.17e-07!3;UBERON:0002370!1.45e-07!23;UBERON:0000974!1.45e-07!23;UBERON:0004807!1.45e-07!23;UBERON:0005058!1.45e-07!23;UBERON:0003351!1.45e-07!23;UBERON:0009113!1.45e-07!23;UBERON:0003295!1.45e-07!23;UBERON:0009722!1.45e-07!23;UBERON:0005562!1.45e-07!23;UBERON:0007690!1.45e-07!23;UBERON:0001004!3.47e-07!42;UBERON:0006562!3.59e-07!24;UBERON:0001557!3.59e-07!24;UBERON:0001042!3.59e-07!24;UBERON:0008814!3.59e-07!24;UBERON:0009145!3.59e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.36e-18,46;UBERON:0002193,1.02e-11,48;UBERON:0002405,1.02e-11,48;UBERON:0002371,1.06e-11,16;UBERON:0002390,7.87e-10,45;UBERON:0003061,7.87e-10,45;UBERON:0000029,4.39e-09,1;UBERON:0001097,4.39e-09,1;UBERON:0003968,4.39e-09,1;UBERON:0001467,4.39e-09,1;UBERON:0001474,1.66e-08,22;UBERON:0004765,1.66e-08,22;UBERON:0001434,1.66e-08,22|phase1_expression=0,0,0,0,0,0,0,1.80772652818207,1.40788722151667,0,0.513653904676515,0.0797721589953364,2.05440875917447,1.22388563386596,0.333109761815663,0.404950534779652,0,3.15462165358238,2.33094537129756,3.39511721438424,0,0,0,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51673909086605,0.725362142011344,1.68046899571232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,12.4290184150642,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0.655453258862952,0.172684981865896,0,1.50791283939272,2.71952841909355,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0,0,0,0.136694227721025,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0.100826185136841,0.194915761479505,0.0962118416403295,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@BC094916}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:545384 | |||
|HGNC= | |||
|MCL_coexpression_id=63 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9PVL3,uniprot:Q504N7 | |||
|association_with_transcript=-28bp_to_ENSMUST00000090406,ENSMUST00000139092,ENSMUST00000170192,NM_001024721,uc007drn.2,uc007dro.2_5end | |||
|cluster_id=chr1:175466116..175466161,- | |||
|description=CAGE_peak_1_at_BC094916_5end | |||
|id=chr1:175466116..175466161,- | |||
|ontology_enrichment_celltype=CL:0002031!1.39e-21!25;CL:0000988!5.69e-16!32;CL:0002032!5.69e-16!32;CL:0000037!5.69e-16!32;CL:0000566!5.69e-16!32;CL:0000837!5.69e-16!32;CL:0000791!6.35e-16!9;CL:0000789!6.35e-16!9;CL:0002420!6.35e-16!9;CL:0002419!6.35e-16!9;CL:0000790!6.35e-16!9;CL:0000738!3.11e-15!17;CL:0002087!3.11e-15!17;CL:0000838!7.80e-15!12;CL:0000624!9.02e-14!8;CL:0000542!1.50e-13!13;CL:0000051!1.50e-13!13;CL:0000084!9.36e-13!11;CL:0000827!9.36e-13!11;CL:0000553!3.08e-10!6;CL:0000556!3.08e-10!6;CL:0002320!6.62e-10!46;CL:0000134!6.62e-10!46;CL:0000893!1.32e-09!6;CL:0002489!1.32e-09!6;CL:0000898!1.32e-09!6;CL:0000809!1.32e-09!6;CL:0000810!1.32e-09!6;CL:0000895!1.32e-09!6;CL:0000808!1.32e-09!6;CL:0000894!1.32e-09!6;CL:0000806!1.32e-09!6;CL:0000807!1.32e-09!6;CL:0000805!1.32e-09!6;CL:0002425!1.32e-09!6;CL:0002436!1.32e-09!6;CL:0002427!1.32e-09!6;CL:0002428!1.32e-09!6;CL:0002429!1.32e-09!6;CL:0002433!1.32e-09!6;CL:0002431!1.32e-09!6;CL:0002432!1.32e-09!6;CL:0000839!1.61e-08!13;CL:0000219!7.11e-08!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,2.07e-34,25;CL:0000988,9.96e-27,32;CL:0002032,9.96e-27,32;CL:0000037,9.96e-27,32;CL:0000837,9.96e-27,32;CL:0000738,1.48e-26,17;CL:0002087,1.48e-26,17;CL:0000838,2.34e-21,12;CL:0000791,7.31e-20,9;CL:0000789,7.31e-20,9;CL:0002420,7.31e-20,9;CL:0002419,7.31e-20,9;CL:0000790,7.31e-20,9;CL:0000542,1.04e-19,13;CL:0000051,1.04e-19,13;CL:0002320,2.36e-18,46;CL:0000134,2.36e-18,46;CL:0000084,2.83e-16,11;CL:0000827,2.83e-16,11;CL:0002476,1.35e-15,2;CL:0000219,1.65e-15,54;CL:0000624,1.36e-14,8;CL:0000839,2.16e-14,13;CL:0000553,5.76e-12,6;CL:0000556,5.76e-12,6;CL:0000763,1.06e-11,16;CL:0000893,2.80e-11,6;CL:0002489,2.80e-11,6;CL:0000898,2.80e-11,6;CL:0000809,2.80e-11,6;CL:0000810,2.80e-11,6;CL:0000895,2.80e-11,6;CL:0000808,2.80e-11,6;CL:0000894,2.80e-11,6;CL:0000806,2.80e-11,6;CL:0000807,2.80e-11,6;CL:0000805,2.80e-11,6;CL:0002425,2.80e-11,6;CL:0002436,2.80e-11,6;CL:0002427,2.80e-11,6;CL:0002428,2.80e-11,6;CL:0002429,2.80e-11,6;CL:0002433,2.80e-11,6;CL:0002431,2.80e-11,6;CL:0002432,2.80e-11,6;CL:0000049,7.47e-10,19;CL:0000723,8.24e-09,91;CL:0000048,8.24e-09,91;CL:0000945,8.81e-09,1;CL:0000236,8.81e-09,1;CL:0000826,8.81e-09,1;CL:0000815,1.47e-08,1;CL:0000792,1.47e-08,1;CL:0000625,1.74e-08,1;CL:0002194,2.91e-08,4;CL:0000766,2.91e-08,4;CL:0000234,2.91e-08,4;CL:0000576,2.91e-08,4;CL:0000235,2.91e-08,4;CL:0000864,2.91e-08,4;CL:0002009,2.91e-08,4;CL:0000040,2.91e-08,4;CL:0000559,2.91e-08,4;CL:0000034,3.36e-08,97;CL:0000050,3.67e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.24e-20!48;UBERON:0002390!1.14e-15!45;UBERON:0003061!1.14e-15!45;UBERON:0002405!5.85e-12!70;UBERON:0003081!2.29e-10!88;UBERON:0002384!6.62e-10!46;UBERON:0004177!6.64e-10!29;UBERON:0003408!7.65e-09!24;UBERON:0002465!1.17e-07!3;UBERON:0002370!1.45e-07!23;UBERON:0000974!1.45e-07!23;UBERON:0004807!1.45e-07!23;UBERON:0005058!1.45e-07!23;UBERON:0003351!1.45e-07!23;UBERON:0009113!1.45e-07!23;UBERON:0003295!1.45e-07!23;UBERON:0009722!1.45e-07!23;UBERON:0005562!1.45e-07!23;UBERON:0007690!1.45e-07!23;UBERON:0001004!3.47e-07!42;UBERON:0006562!3.59e-07!24;UBERON:0001557!3.59e-07!24;UBERON:0001042!3.59e-07!24;UBERON:0008814!3.59e-07!24;UBERON:0009145!3.59e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.36e-18,46;UBERON:0002193,1.02e-11,48;UBERON:0002405,1.02e-11,48;UBERON:0002371,1.06e-11,16;UBERON:0002390,7.87e-10,45;UBERON:0003061,7.87e-10,45;UBERON:0000029,4.39e-09,1;UBERON:0001097,4.39e-09,1;UBERON:0003968,4.39e-09,1;UBERON:0001467,4.39e-09,1;UBERON:0001474,1.66e-08,22;UBERON:0004765,1.66e-08,22;UBERON:0001434,1.66e-08,22 | |||
|phase1_expression=0,0,0,0,0,0,0,1.80772652818207,1.40788722151667,0,0.513653904676515,0.0797721589953364,2.05440875917447,1.22388563386596,0.333109761815663,0.404950534779652,0,3.15462165358238,2.33094537129756,3.39511721438424,0,0,0,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51673909086605,0.725362142011344,1.68046899571232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,12.4290184150642,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0.655453258862952,0.172684981865896,0,1.50791283939272,2.71952841909355,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0,0,0,0.136694227721025,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0.100826185136841,0.194915761479505,0.0962118416403295,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@BC094916 | |||
}} |
Revision as of 08:12, 5 August 2015
Short description: | p1@BC094916 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_BC094916_5end |
Coexpression cluster: | MCL_coexpression_mm9:63 |
Association with transcript: | -28bp_to_ENSMUST00000090406, ENSMUST00000139092, ENSMUST00000170192, NM_001024721, uc007drn.2, uc007dro.2_5end |
EntrezGene: | 545384 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.36e-18 | 46 |
hemolymphoid system | 1.02e-11 | 48 |
immune system | 1.02e-11 | 48 |
bone marrow | 1.06e-11 | 16 |
hematopoietic system | 7.87e-10 | 45 |
blood island | 7.87e-10 | 45 |
lymph node | 4.39e-09 | 1 |
axillary lymph node | 4.39e-09 | 1 |
peripheral lymph node | 4.39e-09 | 1 |
shoulder | 4.39e-09 | 1 |
bone element | 1.66e-08 | 22 |
skeletal element | 1.66e-08 | 22 |
skeletal system | 1.66e-08 | 22 |