FFCP PHASE1:Hg19::chr7:127671742..127671774,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64101 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15586 | |||
|TSSclassifier=strong | |||
|UniProt=C9J7K7 | |||
|association_with_transcript=-68bp_to_ENST00000478726_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_6_at_LRRC4_5end | |||
|id=chr7:127671742..127671774,- | |||
|ontology_enrichment_celltype=CL:0000128!2.21e-07!7;CL:0000126!2.21e-07!7;CL:0000127!2.21e-07!7;CL:0002453!2.21e-07!7;CL:0002605!4.32e-07!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.15e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.34e-57!82;UBERON:0005743!3.55e-56!86;UBERON:0001049!2.33e-54!57;UBERON:0005068!2.33e-54!57;UBERON:0006241!2.33e-54!57;UBERON:0007135!2.33e-54!57;UBERON:0000073!1.25e-51!94;UBERON:0001016!1.25e-51!94;UBERON:0000955!3.92e-47!69;UBERON:0006238!3.92e-47!69;UBERON:0001893!9.85e-47!34;UBERON:0002780!1.51e-46!41;UBERON:0001890!1.51e-46!41;UBERON:0006240!1.51e-46!41;UBERON:0002616!2.12e-46!59;UBERON:0002020!2.42e-46!34;UBERON:0003528!2.42e-46!34;UBERON:0003080!3.12e-45!42;UBERON:0002791!1.29e-44!33;UBERON:0001869!4.21e-43!32;UBERON:0003075!4.26e-42!86;UBERON:0007284!4.26e-42!86;UBERON:0002346!1.20e-39!90;UBERON:0000956!2.12e-36!25;UBERON:0000203!2.12e-36!25;UBERON:0003056!2.07e-32!61;UBERON:0002619!5.44e-31!22;UBERON:0001950!1.30e-30!20;UBERON:0004121!2.25e-28!169;UBERON:0007023!2.49e-28!115;UBERON:0000924!2.29e-27!173;UBERON:0006601!2.29e-27!173;UBERON:0000153!3.63e-26!129;UBERON:0007811!3.63e-26!129;UBERON:0000033!2.24e-25!123;UBERON:0000200!5.11e-15!6;UBERON:0000025!3.49e-13!194;UBERON:0002021!2.06e-12!5;UBERON:0002308!2.76e-11!9;UBERON:0000125!2.76e-11!9;UBERON:0001871!6.64e-11!7;UBERON:0003076!2.01e-10!15;UBERON:0003057!2.01e-10!15;UBERON:0000483!2.71e-09!309;UBERON:0000119!4.51e-09!312;UBERON:0002420!9.92e-09!9;UBERON:0007245!9.92e-09!9;UBERON:0010009!9.92e-09!9;UBERON:0010011!9.92e-09!9;UBERON:0000454!9.92e-09!9;UBERON:0002771!2.35e-08!3;UBERON:0004111!2.47e-08!241;UBERON:0000475!3.16e-08!365;UBERON:0002680!3.21e-08!9;UBERON:0001895!3.21e-08!9;UBERON:0010092!3.21e-08!9;UBERON:0004733!4.69e-08!12;UBERON:0002028!4.69e-08!12;UBERON:0007277!4.69e-08!12;UBERON:0009663!5.26e-08!7;UBERON:0004732!2.38e-07!13;UBERON:0000922!3.19e-07!612;UBERON:0000064!4.73e-07!219;UBERON:0006331!5.95e-07!3;UBERON:0000988!6.47e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.80e-80;22!UBERON:0001950;2.47e-77;20!UBERON:0000956;2.07e-70;25!UBERON:0000203;2.07e-70;25!UBERON:0001869;1.70e-61;32!UBERON:0001893;4.83e-57;34!UBERON:0002791;2.39e-55;32!UBERON:0003528;1.17e-49;34!UBERON:0002020;1.17e-49;34!UBERON:0000200;8.30e-45;6!UBERON:0002780;1.20e-42;41!UBERON:0001890;1.20e-42;41!UBERON:0000073;3.03e-26;53!UBERON:0002616;3.03e-26;53!UBERON:0002021;4.89e-24;5!UBERON:0001870;2.28e-23;3!UBERON:0000955;1.67e-22;68!UBERON:0001017;3.92e-21;75!UBERON:0001871;1.48e-17;6!UBERON:0002771;4.31e-16;2!UBERON:0002702;4.31e-16;2!UBERON:0001872;3.42e-14;5!UBERON:0001016;4.15e-14;83!UBERON:0000349;8.88e-14;5!UBERON:0007023;2.28e-10;114!UBERON:0011216;2.33e-09;132!UBERON:0002581;3.44e-09;1!UBERON:0002902;3.44e-09;1!UBERON:0009899;3.44e-09;1!UBERON:0003112;4.88e-09;1!UBERON:0011158;4.88e-09;1!UBERON:0003128;4.88e-09;1!UBERON:0001703;4.88e-09;1!UBERON:0002241;4.88e-09;1!UBERON:0001882;9.02e-09;1!UBERON:0002022;9.02e-09;1!UBERON:0007190;9.02e-09;1!UBERON:0005403;9.02e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,6.65e-80,22;UBERON:0001950,2.70e-77,20;UBERON:0000956,2.34e-70,25;UBERON:0000203,2.34e-70,25;UBERON:0001869,9.28e-70,32;UBERON:0001893,1.37e-65,34;UBERON:0002791,4.12e-62,32;UBERON:0002780,1.60e-60,41;UBERON:0001890,1.60e-60,41;UBERON:0003080,1.60e-60,41;UBERON:0006240,1.60e-60,41;UBERON:0003528,2.18e-58,34;UBERON:0002020,2.18e-58,34;UBERON:0001017,1.32e-47,81;UBERON:0000955,1.36e-47,68;UBERON:0006238,1.36e-47,68;UBERON:0000073,2.54e-46,53;UBERON:0002616,2.54e-46,53;UBERON:0000200,1.46e-44,6;UBERON:0001049,1.05e-43,56;UBERON:0005068,1.05e-43,56;UBERON:0006241,1.05e-43,56;UBERON:0007135,1.05e-43,56;UBERON:0001016,1.45e-42,89;UBERON:0003056,6.66e-40,61;UBERON:0003075,6.24e-29,82;UBERON:0007284,6.24e-29,82;UBERON:0007023,7.49e-28,114;UBERON:0002346,1.93e-27,86;UBERON:0002021,5.05e-24,5;UBERON:0001870,2.28e-23,3;UBERON:0010371,3.90e-22,104;UBERON:0004121,1.32e-20,171;UBERON:0000924,1.32e-20,171;UBERON:0006601,1.32e-20,171;UBERON:0010314,8.33e-19,132;UBERON:0001871,2.03e-17,6;UBERON:0011216,2.08e-16,223;UBERON:0002702,5.02e-16,2;UBERON:0002771,5.41e-16,2;UBERON:0001872,3.20e-14,5;UBERON:0000349,9.71e-14,5;UBERON:0000025,2.04e-10,192;UBERON:0002902,3.06e-09,1;UBERON:0009899,3.06e-09,1;UBERON:0002581,3.58e-09,1;UBERON:0003112,5.28e-09,1;UBERON:0011158,5.28e-09,1;UBERON:0003128,5.28e-09,1;UBERON:0001703,5.28e-09,1;UBERON:0002241,5.28e-09,1;UBERON:0004761,5.28e-09,1;UBERON:0009617,5.28e-09,1;UBERON:0002022,6.16e-09,1;UBERON:0001882,6.65e-09,1;UBERON:0005403,6.65e-09,1;UBERON:0007190,1.05e-08,1;UBERON:0004111,1.25e-07,240 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0,0.286235987131057,0.136874425072884,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.0945348171640679,0,0,1.0478326039817,0,0,0,0.174129737299267,0.531831842075461,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,1.30139853857622,0.773288812777695,0,0,0,0,0.414415513436035,0,0,0,0,0.178428988797162,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11004124615769,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,1.93866549219044,4.08179631912146,1.99613798001194,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.482385754501632,0,0.442317039724898,0.591095237907095,3.51016635446356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0.702793337176017,0,0,0,0,0,0.91821828489147,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,3.8619585533086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22583065500418,0,0.275078873194468,0,0,0,2.91597871958518,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,3.29470915235301,3.004582336956,0,0,0.434674820589684,0,0,0,0.285465333544967,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35039341457942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,2.6976274540513,1.41696576325585,2.23487402680012,2.66651273512982,0.504143392443436,4.77185042003103,3.22951291263702,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,2.36381546164381,0,2.68692835451539,2.60004821795018,0,0,0,0,0.127762427639595,2.67850917939143,0,0,0,0.0887023701626388,0,0,0.271878931907327,4.53832137583659,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.588925401344836,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0.286679166302903,0,4.6234213329822,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0.103432995861895,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@LRRC4 | |||
}} |
Revision as of 19:08, 22 January 2014
Short description: | p6@LRRC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LRRC4_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -68bp_to_ENST00000478726_5end |
EntrezGene: | LRRC4 |
HGNC: | 15586 |
UniProt: | C9J7K7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data