FFCP PHASE1:Mm9::chr4:13670661..13670681,+: Difference between revisions
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{{FFCP|EntrezGene=12395|HGNC=|MCL_coexpression_id=22|UniProt=Q3UQX8|association_with_transcript=78bp_to_ENSMUST00000006761_5end|description=CAGE_peak_12_at_Runx1t1_5end|id=chr4:13670661..13670681,+|ontology_enrichment_celltype=CL:0000117!4.38e-14!23;CL:0000337!4.38e-14!23;CL:0000540!1.51e-08!33;CL:0000047!1.51e-08!33;CL:0000031!1.51e-08!33;CL:0000404!1.51e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,2.83e-28,23;CL:0000337,2.83e-28,23;CL:0000540,9.37e-18,33;CL:0000047,9.37e-18,33;CL:0000031,9.37e-18,33;CL:0000404,9.37e-18,33;CL:0000393,4.57e-14,39;CL:0000211,4.57e-14,39;CL:0002319,3.41e-12,43;CL:0000221,8.83e-12,44;CL:0000133,8.83e-12,44;CL:0002609,1.55e-10,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!6.92e-17!63;UBERON:0001049!1.68e-16!52;UBERON:0005068!1.68e-16!52;UBERON:0006241!1.68e-16!52;UBERON:0007135!1.68e-16!52;UBERON:0000955!9.95e-16!50;UBERON:0006238!9.95e-16!50;UBERON:0003056!2.47e-15!49;UBERON:0002616!5.12e-15!49;UBERON:0002346!8.03e-15!71;UBERON:0003075!8.03e-15!71;UBERON:0007284!8.03e-15!71;UBERON:0002020!1.03e-14!34;UBERON:0001017!1.37e-14!73;UBERON:0005743!1.37e-14!73;UBERON:0000073!2.62e-14!75;UBERON:0001016!2.62e-14!75;UBERON:0004121!4.38e-13!102;UBERON:0000924!4.38e-13!102;UBERON:0006601!4.38e-13!102;UBERON:0003080!6.70e-13!40;UBERON:0002780!2.48e-12!39;UBERON:0001890!2.48e-12!39;UBERON:0006240!2.48e-12!39;UBERON:0002791!5.86e-12!29;UBERON:0003528!5.86e-12!29;UBERON:0001893!5.86e-12!29;UBERON:0000956!1.01e-08!21;UBERON:0001869!1.01e-08!21;UBERON:0000203!1.01e-08!21;UBERON:0000153!1.57e-08!94;UBERON:0000025!1.12e-07!114;UBERON:0007811!1.70e-07!86;UBERON:0004111!3.24e-07!122;UBERON:0000468!3.66e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.11e-31,34;UBERON:0000073,1.15e-28,54;UBERON:0001017,6.49e-27,73;UBERON:0003528,1.24e-26,29;UBERON:0002791,1.24e-26,29;UBERON:0001893,1.24e-26,29;UBERON:0001049,5.03e-26,52;UBERON:0005068,5.03e-26,52;UBERON:0006241,5.03e-26,52;UBERON:0007135,5.03e-26,52;UBERON:0001016,6.77e-26,75;UBERON:0002346,1.50e-23,64;UBERON:0003075,1.50e-23,64;UBERON:0007284,1.50e-23,64;UBERON:0000955,5.82e-22,47;UBERON:0006238,5.82e-22,47;UBERON:0004121,1.48e-21,95;UBERON:0000924,1.48e-21,95;UBERON:0006601,1.48e-21,95;UBERON:0003080,3.61e-21,40;UBERON:0002616,1.37e-20,46;UBERON:0003056,3.80e-20,49;UBERON:0002780,5.30e-20,39;UBERON:0001890,5.30e-20,39;UBERON:0006240,5.30e-20,39;UBERON:0010371,2.11e-19,73;UBERON:0000956,1.44e-18,21;UBERON:0001869,1.44e-18,21;UBERON:0000203,1.44e-18,21;UBERON:0010314,2.34e-13,92;UBERON:0002619,5.58e-13,17;UBERON:0000025,7.66e-10,114;UBERON:0002420,4.00e-09,8;UBERON:0007245,4.00e-09,8;UBERON:0010009,4.00e-09,8;UBERON:0010011,4.00e-09,8;UBERON:0000454,4.00e-09,8;UBERON:0000369,1.03e-08,5;UBERON:0002435,1.03e-08,5;UBERON:0000204,1.03e-08,5;UBERON:0010082,1.03e-08,5;UBERON:0004111,1.42e-08,122;UBERON:0002021,1.44e-08,10;UBERON:0000411,1.44e-08,10;UBERON:0001950,1.44e-08,10;UBERON:0002240,9.21e-07,6;UBERON:0005174,9.21e-07,6;UBERON:0001137,9.21e-07,6|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,4.65327859977075,2.11596391708813,6.97214543856797,0,0,0,0,0,0,0,2.7996195323289,2.43010688997043,2.73422449756797,0.571301968807607,1.10434270475807,1.95985278743926,2.97120960156533,2.75765635983006,2.20231761998777,2.29837208553338,1.53606533256243,2.76961204233407,2.47016637726506,2.08365348222704,1.11673199600552,0,1.22238598221448,2.35702868378934,2.70506193518296,2.98239113320481,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.346970653532272,0,0,0,0.117588707135705,0,0,0,0,0.323533699894818,0.220841518460394,0,0,0.878342391034642,1.25668024088073,0.255457055208591,0,0,0,1.79748767285787,1.37250180845588,3.64397621127307,2.08589184230732,1.27857728665165,0.41557608911912,0.973447578406546,0.203678727700633,0.124406970610093,0.252722758433675,0.420883711772948,0.260240885925407,0.689706313300419,0.540186389416048,0.90422890701429,1.15662048557257,1.0249097622788,1.3118241438362,0.258703370739016,0.431135985865684,1.32374256117473,0.527853372491847,0.219195732427575,0.556094498451196,0.696504333044333,0.411564272815887,0.796137067273973,0,0,0,0.621377317606506,0.938104239924385,0.540186184383045,0.473489471170421,0.196764231747404,0.462801338662135,0,0,0.350296027101508,0,0.164167464079095,0,0,0.219550115291051,0.402619256281115,1.05144974282064,4.21908910755066,0,0,0.853153002140936,0.232236671860439,0.515469845288373,0.201683524623343,0,0.380451252225118,0,0.164698954724011,0.251335208800269,0.397912944082302,0.38992817423824,0,0.216138049874694,0,0,0.228497025219458,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0.372140947668503,0,0.252578877947112,0,0,0,1.32643988239339,1.466684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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12395 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3UQX8 | |||
|association_with_transcript=78bp_to_ENSMUST00000006761_5end | |||
|cluster_id=chr4:13670661..13670681,+ | |||
|description=CAGE_peak_12_at_Runx1t1_5end | |||
|id=chr4:13670661..13670681,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.38e-14!23;CL:0000337!4.38e-14!23;CL:0000540!1.51e-08!33;CL:0000047!1.51e-08!33;CL:0000031!1.51e-08!33;CL:0000404!1.51e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.83e-28,23;CL:0000337,2.83e-28,23;CL:0000540,9.37e-18,33;CL:0000047,9.37e-18,33;CL:0000031,9.37e-18,33;CL:0000404,9.37e-18,33;CL:0000393,4.57e-14,39;CL:0000211,4.57e-14,39;CL:0002319,3.41e-12,43;CL:0000221,8.83e-12,44;CL:0000133,8.83e-12,44;CL:0002609,1.55e-10,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!6.92e-17!63;UBERON:0001049!1.68e-16!52;UBERON:0005068!1.68e-16!52;UBERON:0006241!1.68e-16!52;UBERON:0007135!1.68e-16!52;UBERON:0000955!9.95e-16!50;UBERON:0006238!9.95e-16!50;UBERON:0003056!2.47e-15!49;UBERON:0002616!5.12e-15!49;UBERON:0002346!8.03e-15!71;UBERON:0003075!8.03e-15!71;UBERON:0007284!8.03e-15!71;UBERON:0002020!1.03e-14!34;UBERON:0001017!1.37e-14!73;UBERON:0005743!1.37e-14!73;UBERON:0000073!2.62e-14!75;UBERON:0001016!2.62e-14!75;UBERON:0004121!4.38e-13!102;UBERON:0000924!4.38e-13!102;UBERON:0006601!4.38e-13!102;UBERON:0003080!6.70e-13!40;UBERON:0002780!2.48e-12!39;UBERON:0001890!2.48e-12!39;UBERON:0006240!2.48e-12!39;UBERON:0002791!5.86e-12!29;UBERON:0003528!5.86e-12!29;UBERON:0001893!5.86e-12!29;UBERON:0000956!1.01e-08!21;UBERON:0001869!1.01e-08!21;UBERON:0000203!1.01e-08!21;UBERON:0000153!1.57e-08!94;UBERON:0000025!1.12e-07!114;UBERON:0007811!1.70e-07!86;UBERON:0004111!3.24e-07!122;UBERON:0000468!3.66e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.11e-31,34;UBERON:0000073,1.15e-28,54;UBERON:0001017,6.49e-27,73;UBERON:0003528,1.24e-26,29;UBERON:0002791,1.24e-26,29;UBERON:0001893,1.24e-26,29;UBERON:0001049,5.03e-26,52;UBERON:0005068,5.03e-26,52;UBERON:0006241,5.03e-26,52;UBERON:0007135,5.03e-26,52;UBERON:0001016,6.77e-26,75;UBERON:0002346,1.50e-23,64;UBERON:0003075,1.50e-23,64;UBERON:0007284,1.50e-23,64;UBERON:0000955,5.82e-22,47;UBERON:0006238,5.82e-22,47;UBERON:0004121,1.48e-21,95;UBERON:0000924,1.48e-21,95;UBERON:0006601,1.48e-21,95;UBERON:0003080,3.61e-21,40;UBERON:0002616,1.37e-20,46;UBERON:0003056,3.80e-20,49;UBERON:0002780,5.30e-20,39;UBERON:0001890,5.30e-20,39;UBERON:0006240,5.30e-20,39;UBERON:0010371,2.11e-19,73;UBERON:0000956,1.44e-18,21;UBERON:0001869,1.44e-18,21;UBERON:0000203,1.44e-18,21;UBERON:0010314,2.34e-13,92;UBERON:0002619,5.58e-13,17;UBERON:0000025,7.66e-10,114;UBERON:0002420,4.00e-09,8;UBERON:0007245,4.00e-09,8;UBERON:0010009,4.00e-09,8;UBERON:0010011,4.00e-09,8;UBERON:0000454,4.00e-09,8;UBERON:0000369,1.03e-08,5;UBERON:0002435,1.03e-08,5;UBERON:0000204,1.03e-08,5;UBERON:0010082,1.03e-08,5;UBERON:0004111,1.42e-08,122;UBERON:0002021,1.44e-08,10;UBERON:0000411,1.44e-08,10;UBERON:0001950,1.44e-08,10;UBERON:0002240,9.21e-07,6;UBERON:0005174,9.21e-07,6;UBERON:0001137,9.21e-07,6 | |||
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|short_description=p12@Runx1t1 | |||
}} |
Revision as of 00:06, 5 August 2015
Short description: | p12@Runx1t1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Runx1t1_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 78bp_to_ENSMUST00000006761_5end |
EntrezGene: | 12395 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.83e-28 | 23 |
neuroblast (sensu Vertebrata) | 2.83e-28 | 23 |
neuron | 9.37e-18 | 33 |
neuronal stem cell | 9.37e-18 | 33 |
neuroblast | 9.37e-18 | 33 |
electrically signaling cell | 9.37e-18 | 33 |
electrically responsive cell | 4.57e-14 | 39 |
electrically active cell | 4.57e-14 | 39 |
neural cell | 3.41e-12 | 43 |
ectodermal cell | 8.83e-12 | 44 |
neurectodermal cell | 8.83e-12 | 44 |
neuron of cerebral cortex | 1.55e-10 | 6 |