FFCP PHASE1:Hg19::chr9:5500966..5500969,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:5500966..5500969,+ | |||
|id=chr9:5500966..5500969,+ | |||
|ontology_enrichment_celltype=CL:0000115!9.02e-41!35;CL:0002139!3.14e-37!24;CL:0002078!3.37e-30!44;CL:0000071!2.34e-29!18;CL:0002546!2.34e-29!18;CL:0000222!6.64e-29!119;CL:0000213!1.63e-22!57;CL:0000215!1.63e-22!57;CL:0000220!1.28e-20!246;CL:0002321!2.84e-20!248;CL:1000413!1.72e-16!9;CL:0002544!1.84e-11!6;CL:0000183!2.70e-10!59;CL:0002543!3.10e-10!6;CL:0000680!8.92e-10!57;CL:0000056!8.92e-10!57;CL:0000355!8.92e-10!57;CL:0000187!1.04e-09!54;CL:0000192!1.33e-09!42;CL:0000514!1.33e-09!42;CL:0005020!2.01e-09!6;CL:0002138!2.01e-09!6;CL:0005022!2.01e-09!6;CL:0000393!4.62e-09!60;CL:0000211!4.62e-09!60;CL:0000359!1.02e-08!32;CL:0002494!2.27e-08!16;CL:0000076!9.06e-08!62;CL:0000128!1.06e-07!7;CL:0000126!1.06e-07!7;CL:0000127!1.06e-07!7;CL:0002453!1.06e-07!7;CL:0002548!1.51e-07!6;CL:0000666!1.94e-07!4;CL:0002188!1.94e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.81e-46;24!CL:0000115;2.10e-44;36!CL:0000071;1.67e-43;18!CL:1000413;1.16e-33;9!CL:0002078;2.89e-26;45!CL:0002544;8.71e-23;6!CL:0000213;4.44e-20;58!CL:0000215;4.44e-20;58!CL:0002188;2.80e-12;5!CL:0002548;3.11e-10;6!CL:0002543;1.04e-09;6!CL:1000746;8.86e-09;7!CL:1000612;8.86e-09;7!CL:0000076;1.29e-08;63!CL:0002545;1.44e-08;2!CL:0002262;2.16e-08;2!CL:1000398;2.16e-08;2!CL:0002588;7.98e-08;2!CL:0000097;1.22e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,8.62e-54,36;CL:0002139,4.13e-46,24;CL:0000071,8.25e-44,18;CL:0002546,8.25e-44,18;CL:0002078,9.22e-42,45;CL:1000413,8.82e-34,9;CL:0000213,5.49e-31,58;CL:0000215,5.49e-31,58;CL:0000222,1.04e-24,121;CL:0002544,6.87e-23,6;CL:0002321,1.04e-13,250;CL:0000076,5.87e-13,63;CL:0002188,2.68e-12,5;CL:0002548,3.43e-10,6;CL:0002543,6.67e-10,6;CL:1000746,8.61e-09,7;CL:1000612,8.61e-09,7;CL:0002545,1.34e-08,2;CL:0002262,2.09e-08,2;CL:1000398,2.09e-08,2;CL:0002588,1.02e-07,2;CL:0000097,1.31e-07,5;CL:0002028,1.31e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;1.67e-43;18!CL:0000222;5.75e-11;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.06e-44!79;UBERON:0007798!1.06e-44!79;UBERON:0001009!1.00e-43!113;UBERON:0004535!2.66e-42!110;UBERON:0000055!3.06e-41!69;UBERON:0003914!1.04e-38!118;UBERON:0004872!3.07e-37!84;UBERON:0001981!2.96e-32!60;UBERON:0007500!2.96e-32!60;UBERON:0004537!2.96e-32!60;UBERON:0006965!2.96e-32!60;UBERON:0001986!2.34e-29!18;UBERON:0004638!2.34e-29!18;UBERON:0004852!2.34e-29!18;UBERON:0000487!7.45e-26!22;UBERON:0000025!5.88e-25!194;UBERON:0000477!7.78e-24!286;UBERON:0004111!1.33e-23!241;UBERON:0000490!3.86e-22!138;UBERON:0006914!5.70e-22!25;UBERON:0000483!2.72e-21!309;UBERON:0000119!7.62e-21!312;UBERON:0003915!1.72e-16!9;UBERON:0004700!1.72e-16!9;UBERON:0001917!1.72e-16!9;UBERON:0001637!3.65e-15!42;UBERON:0003509!3.65e-15!42;UBERON:0004572!3.65e-15!42;UBERON:0001638!4.15e-14!9;UBERON:0003920!4.15e-14!9;UBERON:0004582!4.15e-14!9;UBERON:0003081!9.51e-13!216;UBERON:0007100!1.44e-12!27;UBERON:0001473!3.48e-12!8;UBERON:0004536!3.48e-12!8;UBERON:0006558!3.48e-12!8;UBERON:0000948!2.27e-11!24;UBERON:0005498!2.27e-11!24;UBERON:0004140!2.27e-11!24;UBERON:0009881!2.27e-11!24;UBERON:0004141!2.27e-11!24;UBERON:0003084!2.27e-11!24;UBERON:0007005!2.27e-11!24;UBERON:0004139!2.27e-11!24;UBERON:0004291!2.27e-11!24;UBERON:0000467!1.06e-09!625;UBERON:0000480!1.22e-09!626;UBERON:0002465!2.12e-09!10;UBERON:0002385!5.16e-09!63;UBERON:0001015!5.16e-09!63;UBERON:0000383!5.16e-09!63;UBERON:0003103!5.38e-09!69;UBERON:0005256!8.32e-09!143;UBERON:0000468!9.50e-09!659;UBERON:0002066!1.01e-08!5;UBERON:0001134!1.03e-08!61;UBERON:0002036!1.03e-08!61;UBERON:0003082!1.03e-08!61;UBERON:0000926!2.50e-08!448;UBERON:0004120!2.50e-08!448;UBERON:0006603!2.50e-08!448;UBERON:0000481!3.57e-08!347;UBERON:0004573!6.97e-08!33;UBERON:0004571!6.97e-08!33;UBERON:0000947!9.32e-08!21;UBERON:0010191!9.32e-08!21;UBERON:0004290!1.61e-07!70;UBERON:0000914!1.64e-07!83;UBERON:0002329!1.64e-07!83;UBERON:0003077!1.64e-07!83;UBERON:0003059!1.64e-07!83;UBERON:0007282!1.64e-07!83;UBERON:0009618!1.64e-07!83;UBERON:0007285!1.64e-07!83;UBERON:0002100!3.01e-07!216;UBERON:0003104!3.74e-07!238;UBERON:0009142!3.74e-07!238;UBERON:0000923!4.41e-07!604;UBERON:0005291!4.41e-07!604;UBERON:0006598!4.41e-07!604;UBERON:0002532!4.41e-07!604;UBERON:0002050!5.03e-07!605;UBERON:0005423!5.03e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.67e-43;18!UBERON:0001986;1.67e-43;18!UBERON:0004852;1.67e-43;18!UBERON:0000487;5.46e-40;22!UBERON:0006914;1.06e-34;25!UBERON:0003915;1.16e-33;9!UBERON:0004700;1.16e-33;9!UBERON:0001917;1.16e-33;9!UBERON:0000490;8.68e-24;33!UBERON:0007500;1.09e-20;56!UBERON:0001981;1.09e-20;56!UBERON:0004537;1.09e-20;56!UBERON:0000055;5.87e-20;65!UBERON:0001637;2.42e-14;42!UBERON:0003509;2.42e-14;42!UBERON:0004572;2.42e-14;42!UBERON:0002049;7.30e-14;75!UBERON:0007798;7.30e-14;75!UBERON:0001638;1.48e-13;9!UBERON:0003920;1.48e-13;9!UBERON:0004582;1.48e-13;9!UBERON:0003914;2.87e-13;74!UBERON:0000025;8.55e-12;93!UBERON:0002066;2.04e-11;5!UBERON:0001009;1.44e-10;112!UBERON:0000947;3.82e-10;21!UBERON:0010191;3.82e-10;21!UBERON:0004535;7.10e-10;109!UBERON:0010260;1.69e-09;9!UBERON:0000074;8.86e-09;7!UBERON:0001229;8.86e-09;7!UBERON:0005800;1.44e-08;2!UBERON:0001515;1.44e-08;2!UBERON:0004573;1.51e-08;33!UBERON:0004571;1.51e-08;33!UBERON:0001281;2.16e-08;2!UBERON:0003497;2.16e-08;2!UBERON:0003909;2.16e-08;2!UBERON:0003835;2.16e-08;2!UBERON:0000353;2.16e-08;15!UBERON:0004111;1.87e-07;130!UBERON:0001473;2.71e-07;8!UBERON:0004536;2.71e-07;8!UBERON:0006558;2.71e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,8.25e-44,18;UBERON:0001986,8.25e-44,18;UBERON:0004852,8.25e-44,18;UBERON:0000487,3.17e-40,22;UBERON:0000055,9.58e-38,68;UBERON:0006914,6.59e-35,25;UBERON:0002049,2.27e-34,78;UBERON:0007798,2.27e-34,78;UBERON:0003915,8.82e-34,9;UBERON:0004700,8.82e-34,9;UBERON:0001917,8.82e-34,9;UBERON:0007500,2.30e-32,59;UBERON:0001981,2.30e-32,59;UBERON:0004537,2.30e-32,59;UBERON:0006965,2.30e-32,59;UBERON:0003914,4.88e-32,117;UBERON:0004535,2.77e-30,109;UBERON:0004872,7.93e-30,83;UBERON:0001009,3.02e-29,112;UBERON:0000025,6.75e-21,192;UBERON:0004111,2.48e-19,240;UBERON:0001637,2.46e-16,42;UBERON:0003509,2.46e-16,42;UBERON:0004572,2.46e-16,42;UBERON:0003081,6.17e-16,203;UBERON:0000490,1.08e-14,148;UBERON:0001638,1.13e-13,9;UBERON:0003920,1.13e-13,9;UBERON:0004582,1.13e-13,9;UBERON:0000483,5.71e-13,306;UBERON:0000119,9.51e-13,309;UBERON:0002066,1.88e-11,5;UBERON:0000947,4.11e-10,21;UBERON:0010191,4.11e-10,21;UBERON:0010260,1.50e-09,9;UBERON:0000926,2.74e-09,315;UBERON:0004120,2.74e-09,315;UBERON:0006603,2.74e-09,315;UBERON:0004573,3.12e-09,33;UBERON:0004571,3.12e-09,33;UBERON:0010532,8.61e-09,7;UBERON:0000074,8.61e-09,7;UBERON:0001229,8.61e-09,7;UBERON:0001230,8.61e-09,7;UBERON:0003220,8.61e-09,7;UBERON:0005749,8.61e-09,7;UBERON:0004199,8.61e-09,7;UBERON:0004209,8.61e-09,7;UBERON:0004198,8.61e-09,7;UBERON:0005800,1.34e-08,2;UBERON:0001515,1.34e-08,2;UBERON:0001281,2.09e-08,2;UBERON:0003497,2.09e-08,2;UBERON:0003909,2.09e-08,2;UBERON:0003835,2.09e-08,2;UBERON:0000353,2.10e-08,15;UBERON:0005103,1.08e-07,8;UBERON:0000083,1.08e-07,8;UBERON:0009201,1.08e-07,8;UBERON:0006553,1.08e-07,8;UBERON:0003074,1.08e-07,8;UBERON:0003060,1.08e-07,8;UBERON:0001473,2.67e-07,8;UBERON:0004536,2.67e-07,8;UBERON:0006558,2.67e-07,8;UBERON:0000080,7.77e-07,9;UBERON:0002120,7.77e-07,9;UBERON:0004875,7.77e-07,9;UBERON:0005721,7.77e-07,9;UBERON:0005754,7.77e-07,9;UBERON:0007297,7.77e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,3.19454117451962,13.2582221914761,0,0,0,0,0.672325146451775,1.20538905604795,0,0,0.492484232307152,1.22400414746552,0.626909442956176,1.14494394852423,1.23186982565596,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,0,0.443458794925128,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,14.3108933304028,3.4409383804245,2.42998351125316,5.6530794192401,5.45349267072878,3.57653454522088,14.0026627579663,0.516833518338658,1.06729878806013,0.33472061276467,1.20848795132744,2.28081631715554,0.976248230192678,3.30896772311282,2.43042584364528,2.32179293538607,0.673588117878509,1.68917220724983,1.53316637465883,2.84779697870439,0.732806975721629,0,0,0,0,0,0,0,0.354668382198357,1.12135520028461,0,0.74000264525148,3.42332138939743,3.3677668017422,3.75962377160955,0,0,0,0,0,0,0.23486899728753,0,0,0,0,0,0,0,1.82032272387605,0.718618141816238,0,0,0,0,0,0,1.58805056424029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16708818237254,1.40241773803446,1.6462960453256,2.94017422771084,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0,0,0,0,0,0,0,2.30986316417718,0.462985512576611,2.28304982681518,0,0,0,0,0,9.3733833986777,1.17587489739202,0.425325291727159,0,0,0.383382679165211,0,0.088048434013226,9.53709331487551,14.7002352485301,2.14612136824846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,5.76268235746538,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553107505625109,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27466768141793,1.70093705276516,0.215915916102139,3.08454505380579,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72279661398852,0,0,0,0,0.15350367472613,0.275673144969061,0,0,0.0852266274161009,0,0.165284915360978,0.576570202095319,0.893288987462089,0,0,0,0,0.308033580176089,1.06461206063404,0,0,0.143124886741991,0,0.632758849437452,1.14378116354295,2.303080121802,0.42793898803392,0,0,0.179872457583315,0,0.117812402345686,0.606547444719948,3.17020642346017,0,0,0,1.05650146756755,0,0,0,0,0,0,0.578775534266688,0,0.202910376962704,0.6196469961995,0.563391205064483,1.14729081763241,1.17898849215745,1.426684205925,0,0,0,0,0.349934720244983,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629078458031288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13176968554523,0,0,0,0,0,0.0969890164884194,0,0,0.274083849293502,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.916641696046735,0,0.199679000498991,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640724475406168,0.628817220398664,1.65695622138878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874862855734746,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,2.00013882331577,0,0,0,0,0,0,0,0,0,0,0,0,0.706756583783524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63069123666336,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0.45120521581504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784923038064294,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p@chr9:5500966..5500969,+ | |||
}} |
Revision as of 00:42, 23 January 2014
Short description: | p@chr9:5500966..5500969, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:5500966..5500969, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 8.62e-54 | 36 |
endothelial cell of vascular tree | 4.13e-46 | 24 |
blood vessel endothelial cell | 8.25e-44 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.25e-44 | 18 |
meso-epithelial cell | 9.22e-42 | 45 |
endothelial cell of artery | 8.82e-34 | 9 |
lining cell | 5.49e-31 | 58 |
barrier cell | 5.49e-31 | 58 |
mesodermal cell | 1.04e-24 | 121 |
aortic endothelial cell | 6.87e-23 | 6 |
embryonic cell | 1.04e-13 | 250 |
squamous epithelial cell | 5.87e-13 | 63 |
glomerular endothelial cell | 2.68e-12 | 5 |
cardiac fibroblast | 3.43e-10 | 6 |
vein endothelial cell | 6.67e-10 | 6 |
glomerular cell | 8.61e-09 | 7 |
kidney corpuscule cell | 8.61e-09 | 7 |
thoracic aorta endothelial cell | 1.34e-08 | 2 |
endothelial cell of sinusoid | 2.09e-08 | 2 |
endothelial cell of hepatic sinusoid | 2.09e-08 | 2 |
smooth muscle cell of the umbilical vein | 1.02e-07 | 2 |
mast cell | 1.31e-07 | 5 |
basophil mast progenitor cell | 1.31e-07 | 5 |