FFCP PHASE1:Mm9::chrX:149078961..149078972,-: Difference between revisions
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{{FFCP|EntrezGene=110380|HGNC=|MCL_coexpression_id=803|UniProt=A2ALU4|association_with_transcript=48bp_to_uc009uqj.1,uc009uqk.1_5end|description=CAGE_peak_4_at_Shroom2_5end|id=chrX:149078961..149078972,-|ontology_enrichment_celltype=CL:0000540!2.37e-18!33;CL:0000047!2.37e-18!33;CL:0000031!2.37e-18!33;CL:0000404!2.37e-18!33;CL:0000117!8.59e-17!23;CL:0000337!8.59e-17!23;CL:0000393!3.39e-15!39;CL:0000211!3.39e-15!39;CL:0000221!6.60e-15!44;CL:0000133!6.60e-15!44;CL:0002319!1.11e-14!43;CL:0000055!4.27e-12!50|ontology_enrichment_celltype_v019_2=CL:0000117,7.11e-22,23;CL:0000337,7.11e-22,23;CL:0000540,2.10e-21,33;CL:0000047,2.10e-21,33;CL:0000031,2.10e-21,33;CL:0000404,2.10e-21,33;CL:0000393,5.78e-17,39;CL:0000211,5.78e-17,39;CL:0002319,1.04e-14,43;CL:0000221,3.28e-14,44;CL:0000133,3.28e-14,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!6.73e-30!75;UBERON:0001016!6.73e-30!75;UBERON:0001017!2.75e-29!73;UBERON:0005743!2.75e-29!73;UBERON:0004121!2.42e-25!102;UBERON:0000924!2.42e-25!102;UBERON:0006601!2.42e-25!102;UBERON:0002346!5.74e-23!71;UBERON:0003075!5.74e-23!71;UBERON:0007284!5.74e-23!71;UBERON:0001049!1.04e-22!52;UBERON:0005068!1.04e-22!52;UBERON:0006241!1.04e-22!52;UBERON:0007135!1.04e-22!52;UBERON:0002020!1.11e-22!34;UBERON:0000033!8.32e-22!63;UBERON:0000955!2.07e-20!50;UBERON:0006238!2.07e-20!50;UBERON:0002616!1.51e-19!49;UBERON:0003056!1.65e-18!49;UBERON:0002791!7.43e-18!29;UBERON:0003528!7.43e-18!29;UBERON:0001893!7.43e-18!29;UBERON:0003080!1.75e-15!40;UBERON:0002780!1.02e-14!39;UBERON:0001890!1.02e-14!39;UBERON:0006240!1.02e-14!39;UBERON:0000956!3.83e-12!21;UBERON:0001869!3.83e-12!21;UBERON:0000203!3.83e-12!21;UBERON:0007811!4.30e-11!86;UBERON:0002619!6.76e-11!17;UBERON:0002021!3.45e-10!10;UBERON:0000411!3.45e-10!10;UBERON:0001950!3.45e-10!10;UBERON:0000153!9.10e-09!94;UBERON:0003076!4.76e-08!12;UBERON:0003057!4.76e-08!12;UBERON:0002420!5.23e-07!8;UBERON:0007245!5.23e-07!8;UBERON:0010009!5.23e-07!8;UBERON:0010011!5.23e-07!8;UBERON:0000454!5.23e-07!8;UBERON:0002240!5.44e-07!6;UBERON:0005174!5.44e-07!6;UBERON:0001137!5.44e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.01e-36,73;UBERON:0001016,1.86e-34,75;UBERON:0002020,2.20e-32,34;UBERON:0000073,8.52e-31,54;UBERON:0001049,1.54e-28,52;UBERON:0005068,1.54e-28,52;UBERON:0006241,1.54e-28,52;UBERON:0007135,1.54e-28,52;UBERON:0004121,1.51e-25,95;UBERON:0000924,1.51e-25,95;UBERON:0006601,1.51e-25,95;UBERON:0003528,1.10e-24,29;UBERON:0002791,1.10e-24,29;UBERON:0001893,1.10e-24,29;UBERON:0002346,1.96e-22,64;UBERON:0003075,1.96e-22,64;UBERON:0007284,1.96e-22,64;UBERON:0000955,8.46e-22,47;UBERON:0006238,8.46e-22,47;UBERON:0003080,4.61e-21,40;UBERON:0002616,1.48e-20,46;UBERON:0002780,7.24e-20,39;UBERON:0001890,7.24e-20,39;UBERON:0006240,7.24e-20,39;UBERON:0010371,2.44e-18,73;UBERON:0002619,1.18e-17,17;UBERON:0003056,6.76e-17,49;UBERON:0002021,1.12e-15,10;UBERON:0000411,1.12e-15,10;UBERON:0001950,1.12e-15,10;UBERON:0000956,1.38e-15,21;UBERON:0001869,1.38e-15,21;UBERON:0000203,1.38e-15,21;UBERON:0010314,2.15e-12,92;UBERON:0002420,1.74e-10,8;UBERON:0007245,1.74e-10,8;UBERON:0010009,1.74e-10,8;UBERON:0010011,1.74e-10,8;UBERON:0000454,1.74e-10,8;UBERON:0002240,1.86e-10,6;UBERON:0005174,1.86e-10,6;UBERON:0001137,1.86e-10,6;UBERON:0001948,3.40e-09,5;UBERON:0002315,3.40e-09,5;UBERON:0003076,6.81e-08,12;UBERON:0003057,6.81e-08,12;UBERON:0000025,1.60e-07,114;UBERON:0000369,3.60e-07,5;UBERON:0002435,3.60e-07,5;UBERON:0000204,3.60e-07,5;UBERON:0010082,3.60e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0,0,5.46254444320914,3.70293685490423,11.4089652631112,0,0,0,0,0,0,0.384218305321555,0.518448061542388,0.135005938331691,0.420649922702764,17.9960120174396,20.7616428494517,2.81728838194394,1.34183659425531,3.67687514644008,2.20231761998777,6.2566795661742,5.9906547969935,3.03338461779446,5.30628332893976,3.12548022334056,4.74611098302348,1.68828783009504,6.1119299110724,27.4004584490511,29.6133096062134,10.4383689662168,0.37863096666592,0.302286240427142,0,0,0,0,0,0,0.702222100658759,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0.230615497256059,0,0,0,0,0,0,0,0.220841518460394,0,0,0.878342391034642,0.83778682725382,0,0,0,0,6.5907881338122,6.8625090422794,2.89005009859588,7.30062144807561,6.39288643325826,3.94797284663164,4.54275536589721,0,0,0,0.210441855886474,0.260240885925407,0.919608417733892,1.0803727788321,0.60281927134286,0.544291993210623,0.640568601424249,0.843315521037559,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,3.57492912559016,1.9551876352064,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,6.26147300952389,3.98519734413491,0,0,0,0.390438744296638,0.646270193198397,1.19484398976276,2.45078541490634,1.41538265394416,0.404810701674894,1.46127928955656,1.97643888973262,10.9249247583414,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0,0,0.608929898229199,0,0.21183207086382,0,0,0,0,0,0,0,6.30446026835733,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,11.2950368523413,9.66682996665071,9.73922372846974,6.18671456437275,13.0165678756422,13.5970901530146,9.45031500324528,11.7083512838297,11.3285602246051,10.3552062350364,0.103787347584177,0,0.341467211508268,0.486213434136588,0.628839487883947,1.2869045591501,1.33348036680969,1.23621034343337,0.962757628775446,1.01078884705519,1.52087579934144,0.943131706930381,0.842773567228942,0.576226371643824,0.746661096422973,1.42888107384922,0.811190281613988,1.54327376370964,1.64834360321323,2.50238164228475,0.685738504770831,0.532427418478012,0.953744759789284,0.581385666529314,1.2234219453993,0.338458431566706,1.46342378298218,1.05227884575137,0.814824683075171,3.36685362994643,0.711810108745045,0.788035859004508,1.22769312950907,0.929621047115796,0.964533054905707,1.49886346762768,1.40358965067245,1.28922632428979,1.53030665655075,0.882365676478062,0.463735671240843|short_description=p4@Shroom2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:110380 | |||
|HGNC= | |||
|MCL_coexpression_id=803 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2ALU4 | |||
|association_with_transcript=48bp_to_uc009uqj.1,uc009uqk.1_5end | |||
|cluster_id=chrX:149078961..149078972,- | |||
|description=CAGE_peak_4_at_Shroom2_5end | |||
|id=chrX:149078961..149078972,- | |||
|ontology_enrichment_celltype=CL:0000540!2.37e-18!33;CL:0000047!2.37e-18!33;CL:0000031!2.37e-18!33;CL:0000404!2.37e-18!33;CL:0000117!8.59e-17!23;CL:0000337!8.59e-17!23;CL:0000393!3.39e-15!39;CL:0000211!3.39e-15!39;CL:0000221!6.60e-15!44;CL:0000133!6.60e-15!44;CL:0002319!1.11e-14!43;CL:0000055!4.27e-12!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.11e-22,23;CL:0000337,7.11e-22,23;CL:0000540,2.10e-21,33;CL:0000047,2.10e-21,33;CL:0000031,2.10e-21,33;CL:0000404,2.10e-21,33;CL:0000393,5.78e-17,39;CL:0000211,5.78e-17,39;CL:0002319,1.04e-14,43;CL:0000221,3.28e-14,44;CL:0000133,3.28e-14,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.73e-30!75;UBERON:0001016!6.73e-30!75;UBERON:0001017!2.75e-29!73;UBERON:0005743!2.75e-29!73;UBERON:0004121!2.42e-25!102;UBERON:0000924!2.42e-25!102;UBERON:0006601!2.42e-25!102;UBERON:0002346!5.74e-23!71;UBERON:0003075!5.74e-23!71;UBERON:0007284!5.74e-23!71;UBERON:0001049!1.04e-22!52;UBERON:0005068!1.04e-22!52;UBERON:0006241!1.04e-22!52;UBERON:0007135!1.04e-22!52;UBERON:0002020!1.11e-22!34;UBERON:0000033!8.32e-22!63;UBERON:0000955!2.07e-20!50;UBERON:0006238!2.07e-20!50;UBERON:0002616!1.51e-19!49;UBERON:0003056!1.65e-18!49;UBERON:0002791!7.43e-18!29;UBERON:0003528!7.43e-18!29;UBERON:0001893!7.43e-18!29;UBERON:0003080!1.75e-15!40;UBERON:0002780!1.02e-14!39;UBERON:0001890!1.02e-14!39;UBERON:0006240!1.02e-14!39;UBERON:0000956!3.83e-12!21;UBERON:0001869!3.83e-12!21;UBERON:0000203!3.83e-12!21;UBERON:0007811!4.30e-11!86;UBERON:0002619!6.76e-11!17;UBERON:0002021!3.45e-10!10;UBERON:0000411!3.45e-10!10;UBERON:0001950!3.45e-10!10;UBERON:0000153!9.10e-09!94;UBERON:0003076!4.76e-08!12;UBERON:0003057!4.76e-08!12;UBERON:0002420!5.23e-07!8;UBERON:0007245!5.23e-07!8;UBERON:0010009!5.23e-07!8;UBERON:0010011!5.23e-07!8;UBERON:0000454!5.23e-07!8;UBERON:0002240!5.44e-07!6;UBERON:0005174!5.44e-07!6;UBERON:0001137!5.44e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.01e-36,73;UBERON:0001016,1.86e-34,75;UBERON:0002020,2.20e-32,34;UBERON:0000073,8.52e-31,54;UBERON:0001049,1.54e-28,52;UBERON:0005068,1.54e-28,52;UBERON:0006241,1.54e-28,52;UBERON:0007135,1.54e-28,52;UBERON:0004121,1.51e-25,95;UBERON:0000924,1.51e-25,95;UBERON:0006601,1.51e-25,95;UBERON:0003528,1.10e-24,29;UBERON:0002791,1.10e-24,29;UBERON:0001893,1.10e-24,29;UBERON:0002346,1.96e-22,64;UBERON:0003075,1.96e-22,64;UBERON:0007284,1.96e-22,64;UBERON:0000955,8.46e-22,47;UBERON:0006238,8.46e-22,47;UBERON:0003080,4.61e-21,40;UBERON:0002616,1.48e-20,46;UBERON:0002780,7.24e-20,39;UBERON:0001890,7.24e-20,39;UBERON:0006240,7.24e-20,39;UBERON:0010371,2.44e-18,73;UBERON:0002619,1.18e-17,17;UBERON:0003056,6.76e-17,49;UBERON:0002021,1.12e-15,10;UBERON:0000411,1.12e-15,10;UBERON:0001950,1.12e-15,10;UBERON:0000956,1.38e-15,21;UBERON:0001869,1.38e-15,21;UBERON:0000203,1.38e-15,21;UBERON:0010314,2.15e-12,92;UBERON:0002420,1.74e-10,8;UBERON:0007245,1.74e-10,8;UBERON:0010009,1.74e-10,8;UBERON:0010011,1.74e-10,8;UBERON:0000454,1.74e-10,8;UBERON:0002240,1.86e-10,6;UBERON:0005174,1.86e-10,6;UBERON:0001137,1.86e-10,6;UBERON:0001948,3.40e-09,5;UBERON:0002315,3.40e-09,5;UBERON:0003076,6.81e-08,12;UBERON:0003057,6.81e-08,12;UBERON:0000025,1.60e-07,114;UBERON:0000369,3.60e-07,5;UBERON:0002435,3.60e-07,5;UBERON:0000204,3.60e-07,5;UBERON:0010082,3.60e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0,0,5.46254444320914,3.70293685490423,11.4089652631112,0,0,0,0,0,0,0.384218305321555,0.518448061542388,0.135005938331691,0.420649922702764,17.9960120174396,20.7616428494517,2.81728838194394,1.34183659425531,3.67687514644008,2.20231761998777,6.2566795661742,5.9906547969935,3.03338461779446,5.30628332893976,3.12548022334056,4.74611098302348,1.68828783009504,6.1119299110724,27.4004584490511,29.6133096062134,10.4383689662168,0.37863096666592,0.302286240427142,0,0,0,0,0,0,0.702222100658759,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0.230615497256059,0,0,0,0,0,0,0,0.220841518460394,0,0,0.878342391034642,0.83778682725382,0,0,0,0,6.5907881338122,6.8625090422794,2.89005009859588,7.30062144807561,6.39288643325826,3.94797284663164,4.54275536589721,0,0,0,0.210441855886474,0.260240885925407,0.919608417733892,1.0803727788321,0.60281927134286,0.544291993210623,0.640568601424249,0.843315521037559,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,3.57492912559016,1.9551876352064,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,6.26147300952389,3.98519734413491,0,0,0,0.390438744296638,0.646270193198397,1.19484398976276,2.45078541490634,1.41538265394416,0.404810701674894,1.46127928955656,1.97643888973262,10.9249247583414,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0,0,0.608929898229199,0,0.21183207086382,0,0,0,0,0,0,0,6.30446026835733,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,11.2950368523413,9.66682996665071,9.73922372846974,6.18671456437275,13.0165678756422,13.5970901530146,9.45031500324528,11.7083512838297,11.3285602246051,10.3552062350364,0.103787347584177,0,0.341467211508268,0.486213434136588,0.628839487883947,1.2869045591501,1.33348036680969,1.23621034343337,0.962757628775446,1.01078884705519,1.52087579934144,0.943131706930381,0.842773567228942,0.576226371643824,0.746661096422973,1.42888107384922,0.811190281613988,1.54327376370964,1.64834360321323,2.50238164228475,0.685738504770831,0.532427418478012,0.953744759789284,0.581385666529314,1.2234219453993,0.338458431566706,1.46342378298218,1.05227884575137,0.814824683075171,3.36685362994643,0.711810108745045,0.788035859004508,1.22769312950907,0.929621047115796,0.964533054905707,1.49886346762768,1.40358965067245,1.28922632428979,1.53030665655075,0.882365676478062,0.463735671240843 | |||
|short_description=p4@Shroom2 | |||
}} |
Revision as of 02:37, 6 August 2015
Short description: | p4@Shroom2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Shroom2_5end |
Coexpression cluster: | MCL_coexpression_mm9:803 |
Association with transcript: | 48bp_to_uc009uqj.1, uc009uqk.1_5end |
EntrezGene: | 110380 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.11e-22 | 23 |
neuroblast (sensu Vertebrata) | 7.11e-22 | 23 |
neuron | 2.10e-21 | 33 |
neuronal stem cell | 2.10e-21 | 33 |
neuroblast | 2.10e-21 | 33 |
electrically signaling cell | 2.10e-21 | 33 |
electrically responsive cell | 5.78e-17 | 39 |
electrically active cell | 5.78e-17 | 39 |
neural cell | 1.04e-14 | 43 |
ectodermal cell | 3.28e-14 | 44 |
neurectodermal cell | 3.28e-14 | 44 |