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Coexpression cluster:C72: Difference between revisions

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{{Coexpression_clusters
{{Coexpression_clusters
|coexpression_dpi_cluster_scores_median=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0593771573651105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415833616916382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0699368280688007,0,0,0,0,0.0769963366386578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.29938140626407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.627073242875767,1.02736199801906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357821285367978,0.092743246865863,0,0,0,0.0267975841371139,0,0.402092316166744,0.226462404668981,0.0283076897745917,0.0300822291072195,0,0,0,0,0,0,0,0,0,0,0
|full_id=C72_skeletal_tongue_throat_heart_diaphragm_penis_left
|full_id=C72_skeletal_tongue_throat_heart_diaphragm_penis_left
|gostat_on_coexpression_clusters=GO:0006936!muscle contraction!4.71780622765726e-13!84676;29765;779;6261;4619;786;7135;1144;10345;7273;4604;10324$GO:0003012!muscle system process!4.71780622765726e-13!84676;29765;779;6261;4619;786;7135;1144;10345;7273;4604;10324$GO:0008092!cytoskeletal protein binding!4.80348745343815e-10!84676;29765;4892;84448;4619;6249;7135;121512;6840;23224;442721;7273;4604;4703;6710$GO:0005856!cytoskeleton!1.10525164910753e-08!53405;4619;6249;4134;23224;442721;4604;10324;23392;6710;84676;29765;84448;10579;7135;121512;6840;4703;5144$GO:0043292!contractile fiber!1.10525164910753e-08!6840;84676;7273;4619;4604;4703;7135$GO:0003779!actin binding!1.59181340812528e-08!29765;4892;84448;4619;7135;121512;6840;23224;442721;4604;4703;6710$GO:0030016!myofibril!1.52750872858223e-07!6840;7273;4619;4604;4703;7135$GO:0044449!contractile fiber part!2.88089018463705e-07!6840;7273;4619;4604;4703;7135$GO:0005737!cytoplasm!3.19969802893113e-07!53405;1917;6249;8844;3767;4604;167838;7352;84676;29765;221662;10579;54583;7135;6840;7273;5213;4734;8531;2273;5144;64328;6261;4619;78986;23224;10345;10324;23392;140461;57509;6710;84448;121512;844;3895;4703$GO:0015629!actin cytoskeleton!9.28343023555808e-07!29765;53405;84448;4619;7135;6840;4604;4703;6710$GO:0006941!striated muscle contraction!9.60050066496648e-07!7273;4619;4604;10324;7135$GO:0043228!non-membrane-bound organelle!1.11647385590458e-06!53405;4619;6249;4134;23224;442721;4604;10324;23392;6710;84676;29765;84448;10579;7135;121512;6840;7273;4703;5144$GO:0043232!intracellular non-membrane-bound organelle!1.11647385590458e-06!53405;4619;6249;4134;23224;442721;4604;10324;23392;6710;84676;29765;84448;10579;7135;121512;6840;7273;4703;5144$GO:0030017!sarcomere!2.91006654844817e-06!7273;4619;4604;4703;7135$GO:0044444!cytoplasmic part!1.59373741575407e-05!53405;1917;6261;4619;6249;78986;3767;10345;4604;23392;6710;57509;7352;84676;10579;54583;7135;844;121512;6840;3895;7273;5213;4703;5144$GO:0044430!cytoskeletal part!2.10350400668807e-05!84676;29765;53405;10579;4619;6249;7135;4134;4604;23392;5144;6710$GO:0007517!muscle development!7.39952479970909e-05!6840;7273;4618;2273;4703;10290$GO:0005515!protein binding!0.000123889876503251!53405;1917;377007;6249;208;5837;8844;1144;3767;442721;4604;79442;84676;29765;10579;54583;7135;1440;6840;7273;5213;4734;8531;5532;4892;4619;10345;23224;10324;6710;84448;55222;53342;121512;5588;22823;4703$GO:0032501!multicellular organismal process!0.000132708827171224!779;6261;4619;786;10290;1144;10345;4618;4604;10324;7352;84676;29765;6324;54583;7135;1440;6840;7273;2273;4703$GO:0005626!insoluble fraction!0.000348801263931253!53405;5144;5142$GO:0005523!tropomyosin binding!0.00038696732543958!29765;442721;7135$GO:0051393!alpha-actinin binding!0.000415003140747196!4892;7273$GO:0003008!system process!0.000562331685675669!84676;29765;779;6261;4619;6324;786;7135;1144;10345;7273;4604;10324$GO:0000267!cell fraction!0.000574835885879634!7352;53405;6324;5142;786;3767;3895;5144;6575;6710$GO:0042805!actinin binding!0.00121400091885135!4892;7273$GO:0051128!regulation of cellular component organization and biogenesis!0.00164998697279683!6840;4134;4703;6710$GO:0004115!3',5'-cyclic-AMP phosphodiesterase activity!0.00219001172961378!5144;5142$GO:0015270!dihydropyridine-sensitive calcium channel activity!0.00219001172961378!779;786$GO:0044424!intracellular part!0.00219001172961378!53405;1917;6249;8844;3767;442721;4618;4604;167838;7352;84676;29765;221662;10579;54583;7135;6840;7273;5213;4734;8531;2273;5144;64328;5532;6261;4619;78986;23223;10290;4134;10345;23224;10324;23392;140461;57509;6710;84448;121512;844;3895;22823;4703$GO:0022836!gated channel activity!0.00219001172961378!53405;1144;779;3767;6261;6324;786$GO:0008307!structural constituent of muscle!0.00219001172961378!7273;4604;4703$GO:0007010!cytoskeleton organization and biogenesis!0.00219001172961378!6840;4134;3895;84448;7273;4703;6710;121512$GO:0015630!microtubule cytoskeleton!0.00237390257288476!84676;53405;4134;10579;6249;5144;23392$GO:0051261!protein depolymerization!0.00255112441499983!6840;4134;6710$GO:0030832!regulation of actin filament length!0.00255112441499983!6840;4703;6710$GO:0032535!regulation of cellular component size!0.00257385019430711!6840;4703;6710$GO:0032956!regulation of actin cytoskeleton organization and biogenesis!0.00257385019430711!6840;4703;6710$GO:0005813!centrosome!0.00302637363172356!53405;10579;5144;23392$GO:0030036!actin cytoskeleton organization and biogenesis!0.00322034012142042!6840;7273;4703;6710;121512$GO:0051129!negative regulation of cellular component organization and biogenesis!0.00322034012142042!6840;4134;6710$GO:0043687!post-translational protein modification!0.00364982554883671!84676;5532;78986;208;10290;8844;51676;7273;92591;4734;5588;51207;10324;140461$GO:0030029!actin filament-based process!0.00364982554883671!6840;7273;4703;6710;121512$GO:0033043!regulation of organelle organization and biogenesis!0.00364982554883671!6840;4703;6710$GO:0051493!regulation of cytoskeleton organization and biogenesis!0.00364982554883671!6840;4703;6710$GO:0043412!biopolymer modification!0.00397619239306852!84676;5532;78986;208;10290;84881;8844;51676;7273;92591;4734;5588;51207;10324;140461$GO:0005261!cation channel activity!0.0040325499629083!1144;779;3767;6261;6324;786$GO:0005815!microtubule organizing center!0.0040325499629083!53405;10579;5144;23392$GO:0005790!smooth endoplasmic reticulum!0.00413319883702199!6261;844$GO:0030018!Z disc!0.00545874206205575!7273;4703$GO:0007519!skeletal muscle development!0.00545874206205575!6840;7273;4618$GO:0043229!intracellular organelle!0.00667615324188191!53405;1917;6249;3767;442721;4618;4604;7352;84676;29765;221662;10579;7135;6840;7273;8531;2273;5144;64328;6261;4619;78986;23223;10290;4134;10345;23224;10324;23392;57509;6710;84448;121512;844;3895;22823;4703$GO:0032982!myosin filament!0.00667615324188191!4619;4604$GO:0005863!striated muscle thick filament!0.00667615324188191!4619;4604$GO:0043226!organelle!0.00667615324188191!53405;1917;6249;3767;442721;4618;4604;7352;84676;29765;221662;10579;7135;6840;7273;8531;2273;5144;64328;6261;4619;78986;23223;10290;4134;10345;23224;10324;23392;57509;6710;84448;121512;844;3895;22823;4703$GO:0031674!I band!0.00729955721247181!7273;4703$GO:0005216!ion channel activity!0.00729955721247181!53405;1144;779;3767;6261;6324;786$GO:0005624!membrane fraction!0.00729955721247181!7352;3895;3767;6324;786;6710;6575$GO:0022832!voltage-gated channel activity!0.00729955721247181!53405;779;3767;6324;786$GO:0005244!voltage-gated ion channel activity!0.00729955721247181!53405;779;3767;6324;786$GO:0022838!substrate specific channel activity!0.00738676379197793!53405;1144;779;3767;6261;6324;786$GO:0046873!metal ion transmembrane transporter activity!0.00757041830826794!1144;779;3767;6261;6324;786$GO:0022803!passive transmembrane transporter activity!0.00759204471381507!53405;1144;779;3767;6261;6324;786$GO:0015267!channel activity!0.00759204471381507!53405;1144;779;3767;6261;6324;786$GO:0006464!protein modification process!0.00761312902011161!84676;5532;78986;208;10290;8844;51676;7273;92591;4734;5588;51207;10324;140461$GO:0014706!striated muscle development!0.00923653099126956!6840;7273;4618$GO:0051693!actin filament capping!0.00923653099126956!6840;6710$GO:0051016!barbed-end actin filament capping!0.00923653099126956!6840;6710$GO:0065008!regulation of biological quality!0.00923653099126956!6840;1144;6261;2273;5588;4703;54583;6710$GO:0030835!negative regulation of actin filament depolymerization!0.00978453731110029!6840;6710$GO:0005248!voltage-gated sodium channel activity!0.00978453731110029!779;6324$GO:0030834!regulation of actin filament depolymerization!0.0102162713259087!6840;6710$GO:0030042!actin filament depolymerization!0.0102162713259087!6840;6710$GO:0043161!proteasomal ubiquitin-dependent protein catabolic process!0.0102162713259087!84676;23392$GO:0006512!ubiquitin cycle!0.0102162713259087!84676;51676;4734;92591;10324;140461$GO:0005859!muscle myosin complex!0.0115045985346233!4619;4604$GO:0016528!sarcoplasm!0.0115045985346233!10345;844$GO:0016529!sarcoplasmic reticulum!0.0115045985346233!10345;844$GO:0016460!myosin II complex!0.0122866854236638!4619;4604$GO:0051248!negative regulation of protein metabolic process!0.0124175603495476!6840;4134;6710$GO:0044446!intracellular organelle part!0.0131669436439726!53405;4619;6249;4134;10345;23224;4604;23392;6710;7352;29765;84676;10579;844;7135;3895;7273;5144$GO:0044422!organelle part!0.0135033263070627!53405;4619;6249;4134;10345;23224;4604;23392;6710;7352;29765;84676;10579;844;7135;3895;7273;5144$GO:0043234!protein complex!0.014746835800996!29765;5532;779;1917;4619;6249;786;7135;1144;4134;5213;4604;23392;6710$GO:0005262!calcium channel activity!0.0168001239796566!779;6261;786$GO:0031432!titin binding!0.0168001239796566!84676$GO:0005130!granulocyte colony-stimulating factor receptor binding!0.0168001239796566!1440$GO:0015755!fructose transport!0.0168001239796566!6518$GO:0022843!voltage-gated cation channel activity!0.0168001239796566!779;3767;6324;786$GO:0005622!intracellular!0.0168001239796566!53405;1917;6249;8844;3767;442721;4618;4604;167838;7352;84676;29765;221662;10579;54583;7135;6840;7273;5213;4734;8531;2273;5144;64328;5532;6261;4619;78986;23223;10290;4134;10345;23224;10324;23392;140461;57509;6710;84448;121512;844;3895;5588;22823;4703$GO:0006811!ion transport!0.0178833616688749!7352;53405;1144;779;3767;6261;6324;786;6575$GO:0009892!negative regulation of metabolic process!0.017984009377158!6840;4134;4618;8531;6710$GO:0008324!cation transmembrane transporter activity!0.0186624188117122!1144;779;3767;6261;6324;786;6575$GO:0048523!negative regulation of cellular process!0.0206785466930507!6840;4134;1917;4618;8531;6710;10290;57509$GO:0005891!voltage-gated calcium channel complex!0.0206785466930507!779;786$GO:0048513!organ development!0.0206785466930507!54583;10290;1440;6840;2273;4618;7273;4703$GO:0051015!actin filament binding!0.0225951056945113!6840;6710$GO:0005516!calmodulin binding!0.0242672502478497!5532;7273;4619$GO:0048519!negative regulation of biological process!0.0248333300298026!6840;4134;1917;4618;8531;6710;10290;57509$GO:0008064!regulation of actin polymerization and/or depolymerization!0.0277726489503542!6840;6710$GO:0004114!3',5'-cyclic-nucleotide phosphodiesterase activity!0.028561141721818!5144;5142$GO:0005927!muscle tendon junction!0.028561141721818!4892$GO:0008184!glycogen phosphorylase activity!0.028561141721818!5837$GO:0051371!muscle alpha-actinin binding!0.028561141721818!4892$GO:0005977!glycogen metabolic process!0.0297827758821279!5837;5213$GO:0004112!cyclic-nucleotide phosphodiesterase activity!0.0297827758821279!5144;5142$GO:0006073!glucan metabolic process!0.0307397024964582!5837;5213$GO:0022891!substrate-specific transmembrane transporter activity!0.0308174718294037!53405;779;6261;6324;6518;786;1144;3767;6575$GO:0006996!organelle organization and biogenesis!0.031183611676447!7352;84448;121512;6840;3895;4134;7273;4703;6710$GO:0006112!energy reserve metabolic process!0.0389703584237744!5837;5213$GO:0005218!intracellular ligand-gated calcium channel activity!0.0393269337737831!6261$GO:0005353!fructose transmembrane transporter activity!0.0393269337737831!6518$GO:0005219!ryanodine-sensitive calcium-release channel activity!0.0393269337737831!6261$GO:0005272!sodium channel activity!0.0402774717560184!779;6324$GO:0015075!ion transmembrane transporter activity!0.0411999819333484!53405;1144;779;3767;6261;6324;786;6575$GO:0006816!calcium ion transport!0.0416278925607318!779;6261;786$GO:0019992!diacylglycerol binding!0.0416278925607318!8844;5588$GO:0044260!cellular macromolecule metabolic process!0.0416278925607318!5532;1917;78986;208;10290;5837;8844;4134;51676;92591;51207;10324;23392;6710;140461;84676;6840;7273;4734;5213;5588$GO:0008154!actin polymerization and/or depolymerization!0.0434972830287973!6840;6710$GO:0042578!phosphoric ester hydrolase activity!0.0434972830287973!5532;78986;51207;5144;5142$GO:0022857!transmembrane transporter activity!0.0434972830287973!53405;779;6261;6324;6518;786;1144;3767;6575$GO:0008138!protein tyrosine/serine/threonine phosphatase activity!0.0443840293604972!78986;51207$GO:0033018!sarcoplasmic reticulum lumen!0.0443840293604972!844$GO:0032364!oxygen homeostasis!0.0443840293604972!54583$GO:0001892!embryonic placenta development!0.0443840293604972!54583$GO:0033483!gas homeostasis!0.0443840293604972!54583$GO:0006110!regulation of glycolysis!0.0443840293604972!5213$GO:0005315!inorganic phosphate transmembrane transporter activity!0.0443840293604972!6575$GO:0005955!calcineurin complex!0.0443840293604972!5532$GO:0030851!granulocyte differentiation!0.0443840293604972!1440$GO:0007525!somatic muscle development!0.0443840293604972!4703$GO:0043034!costamere!0.0443840293604972!6840$GO:0016068!type I hypersensitivity!0.0443840293604972!221662$GO:0005245!voltage-gated calcium channel activity!0.0467031129380266!779;786$GO:0006812!cation transport!0.0478529649024454!7352;779;3767;6261;6324;786$GO:0048856!anatomical structure development!0.0486770779119948!54583;10290;121512;1440;6840;7273;2273;4618;5588;4703
|gostat_on_coexpression_clusters=GO:0006936!muscle contraction!4.71780622765726e-13!84676;29765;779;6261;4619;786;7135;1144;10345;7273;4604;10324$GO:0003012!muscle system process!4.71780622765726e-13!84676;29765;779;6261;4619;786;7135;1144;10345;7273;4604;10324$GO:0008092!cytoskeletal protein binding!4.80348745343815e-10!84676;29765;4892;84448;4619;6249;7135;121512;6840;23224;442721;7273;4604;4703;6710$GO:0005856!cytoskeleton!1.10525164910753e-08!53405;4619;6249;4134;23224;442721;4604;10324;23392;6710;84676;29765;84448;10579;7135;121512;6840;4703;5144$GO:0043292!contractile fiber!1.10525164910753e-08!6840;84676;7273;4619;4604;4703;7135$GO:0003779!actin binding!1.59181340812528e-08!29765;4892;84448;4619;7135;121512;6840;23224;442721;4604;4703;6710$GO:0030016!myofibril!1.52750872858223e-07!6840;7273;4619;4604;4703;7135$GO:0044449!contractile fiber part!2.88089018463705e-07!6840;7273;4619;4604;4703;7135$GO:0005737!cytoplasm!3.19969802893113e-07!53405;1917;6249;8844;3767;4604;167838;7352;84676;29765;221662;10579;54583;7135;6840;7273;5213;4734;8531;2273;5144;64328;6261;4619;78986;23224;10345;10324;23392;140461;57509;6710;84448;121512;844;3895;4703$GO:0015629!actin cytoskeleton!9.28343023555808e-07!29765;53405;84448;4619;7135;6840;4604;4703;6710$GO:0006941!striated muscle contraction!9.60050066496648e-07!7273;4619;4604;10324;7135$GO:0043228!non-membrane-bound organelle!1.11647385590458e-06!53405;4619;6249;4134;23224;442721;4604;10324;23392;6710;84676;29765;84448;10579;7135;121512;6840;7273;4703;5144$GO:0043232!intracellular non-membrane-bound organelle!1.11647385590458e-06!53405;4619;6249;4134;23224;442721;4604;10324;23392;6710;84676;29765;84448;10579;7135;121512;6840;7273;4703;5144$GO:0030017!sarcomere!2.91006654844817e-06!7273;4619;4604;4703;7135$GO:0044444!cytoplasmic part!1.59373741575407e-05!53405;1917;6261;4619;6249;78986;3767;10345;4604;23392;6710;57509;7352;84676;10579;54583;7135;844;121512;6840;3895;7273;5213;4703;5144$GO:0044430!cytoskeletal part!2.10350400668807e-05!84676;29765;53405;10579;4619;6249;7135;4134;4604;23392;5144;6710$GO:0007517!muscle development!7.39952479970909e-05!6840;7273;4618;2273;4703;10290$GO:0005515!protein binding!0.000123889876503251!53405;1917;377007;6249;208;5837;8844;1144;3767;442721;4604;79442;84676;29765;10579;54583;7135;1440;6840;7273;5213;4734;8531;5532;4892;4619;10345;23224;10324;6710;84448;55222;53342;121512;5588;22823;4703$GO:0032501!multicellular organismal process!0.000132708827171224!779;6261;4619;786;10290;1144;10345;4618;4604;10324;7352;84676;29765;6324;54583;7135;1440;6840;7273;2273;4703$GO:0005626!insoluble fraction!0.000348801263931253!53405;5144;5142$GO:0005523!tropomyosin binding!0.00038696732543958!29765;442721;7135$GO:0051393!alpha-actinin binding!0.000415003140747196!4892;7273$GO:0003008!system process!0.000562331685675669!84676;29765;779;6261;4619;6324;786;7135;1144;10345;7273;4604;10324$GO:0000267!cell fraction!0.000574835885879634!7352;53405;6324;5142;786;3767;3895;5144;6575;6710$GO:0042805!actinin binding!0.00121400091885135!4892;7273$GO:0051128!regulation of cellular component organization and biogenesis!0.00164998697279683!6840;4134;4703;6710$GO:0004115!3',5'-cyclic-AMP phosphodiesterase activity!0.00219001172961378!5144;5142$GO:0015270!dihydropyridine-sensitive calcium channel activity!0.00219001172961378!779;786$GO:0044424!intracellular part!0.00219001172961378!53405;1917;6249;8844;3767;442721;4618;4604;167838;7352;84676;29765;221662;10579;54583;7135;6840;7273;5213;4734;8531;2273;5144;64328;5532;6261;4619;78986;23223;10290;4134;10345;23224;10324;23392;140461;57509;6710;84448;121512;844;3895;22823;4703$GO:0022836!gated channel activity!0.00219001172961378!53405;1144;779;3767;6261;6324;786$GO:0008307!structural constituent of muscle!0.00219001172961378!7273;4604;4703$GO:0007010!cytoskeleton organization and biogenesis!0.00219001172961378!6840;4134;3895;84448;7273;4703;6710;121512$GO:0015630!microtubule cytoskeleton!0.00237390257288476!84676;53405;4134;10579;6249;5144;23392$GO:0051261!protein depolymerization!0.00255112441499983!6840;4134;6710$GO:0030832!regulation of actin filament length!0.00255112441499983!6840;4703;6710$GO:0032535!regulation of cellular component size!0.00257385019430711!6840;4703;6710$GO:0032956!regulation of actin cytoskeleton organization and biogenesis!0.00257385019430711!6840;4703;6710$GO:0005813!centrosome!0.00302637363172356!53405;10579;5144;23392$GO:0030036!actin cytoskeleton organization and biogenesis!0.00322034012142042!6840;7273;4703;6710;121512$GO:0051129!negative regulation of cellular component organization and biogenesis!0.00322034012142042!6840;4134;6710$GO:0043687!post-translational protein modification!0.00364982554883671!84676;5532;78986;208;10290;8844;51676;7273;92591;4734;5588;51207;10324;140461$GO:0030029!actin filament-based process!0.00364982554883671!6840;7273;4703;6710;121512$GO:0033043!regulation of organelle organization and biogenesis!0.00364982554883671!6840;4703;6710$GO:0051493!regulation of cytoskeleton organization and biogenesis!0.00364982554883671!6840;4703;6710$GO:0043412!biopolymer modification!0.00397619239306852!84676;5532;78986;208;10290;84881;8844;51676;7273;92591;4734;5588;51207;10324;140461$GO:0005261!cation channel activity!0.0040325499629083!1144;779;3767;6261;6324;786$GO:0005815!microtubule organizing center!0.0040325499629083!53405;10579;5144;23392$GO:0005790!smooth endoplasmic reticulum!0.00413319883702199!6261;844$GO:0030018!Z disc!0.00545874206205575!7273;4703$GO:0007519!skeletal muscle development!0.00545874206205575!6840;7273;4618$GO:0043229!intracellular organelle!0.00667615324188191!53405;1917;6249;3767;442721;4618;4604;7352;84676;29765;221662;10579;7135;6840;7273;8531;2273;5144;64328;6261;4619;78986;23223;10290;4134;10345;23224;10324;23392;57509;6710;84448;121512;844;3895;22823;4703$GO:0032982!myosin filament!0.00667615324188191!4619;4604$GO:0005863!striated muscle thick filament!0.00667615324188191!4619;4604$GO:0043226!organelle!0.00667615324188191!53405;1917;6249;3767;442721;4618;4604;7352;84676;29765;221662;10579;7135;6840;7273;8531;2273;5144;64328;6261;4619;78986;23223;10290;4134;10345;23224;10324;23392;57509;6710;84448;121512;844;3895;22823;4703$GO:0031674!I band!0.00729955721247181!7273;4703$GO:0005216!ion channel activity!0.00729955721247181!53405;1144;779;3767;6261;6324;786$GO:0005624!membrane fraction!0.00729955721247181!7352;3895;3767;6324;786;6710;6575$GO:0022832!voltage-gated channel activity!0.00729955721247181!53405;779;3767;6324;786$GO:0005244!voltage-gated ion channel activity!0.00729955721247181!53405;779;3767;6324;786$GO:0022838!substrate specific channel activity!0.00738676379197793!53405;1144;779;3767;6261;6324;786$GO:0046873!metal ion transmembrane transporter activity!0.00757041830826794!1144;779;3767;6261;6324;786$GO:0022803!passive transmembrane transporter activity!0.00759204471381507!53405;1144;779;3767;6261;6324;786$GO:0015267!channel activity!0.00759204471381507!53405;1144;779;3767;6261;6324;786$GO:0006464!protein modification process!0.00761312902011161!84676;5532;78986;208;10290;8844;51676;7273;92591;4734;5588;51207;10324;140461$GO:0014706!striated muscle development!0.00923653099126956!6840;7273;4618$GO:0051693!actin filament capping!0.00923653099126956!6840;6710$GO:0051016!barbed-end actin filament capping!0.00923653099126956!6840;6710$GO:0065008!regulation of biological quality!0.00923653099126956!6840;1144;6261;2273;5588;4703;54583;6710$GO:0030835!negative regulation of actin filament depolymerization!0.00978453731110029!6840;6710$GO:0005248!voltage-gated sodium channel activity!0.00978453731110029!779;6324$GO:0030834!regulation of actin filament depolymerization!0.0102162713259087!6840;6710$GO:0030042!actin filament depolymerization!0.0102162713259087!6840;6710$GO:0043161!proteasomal ubiquitin-dependent protein catabolic process!0.0102162713259087!84676;23392$GO:0006512!ubiquitin cycle!0.0102162713259087!84676;51676;4734;92591;10324;140461$GO:0005859!muscle myosin complex!0.0115045985346233!4619;4604$GO:0016528!sarcoplasm!0.0115045985346233!10345;844$GO:0016529!sarcoplasmic reticulum!0.0115045985346233!10345;844$GO:0016460!myosin II complex!0.0122866854236638!4619;4604$GO:0051248!negative regulation of protein metabolic process!0.0124175603495476!6840;4134;6710$GO:0044446!intracellular organelle part!0.0131669436439726!53405;4619;6249;4134;10345;23224;4604;23392;6710;7352;29765;84676;10579;844;7135;3895;7273;5144$GO:0044422!organelle part!0.0135033263070627!53405;4619;6249;4134;10345;23224;4604;23392;6710;7352;29765;84676;10579;844;7135;3895;7273;5144$GO:0043234!protein complex!0.014746835800996!29765;5532;779;1917;4619;6249;786;7135;1144;4134;5213;4604;23392;6710$GO:0005262!calcium channel activity!0.0168001239796566!779;6261;786$GO:0031432!titin binding!0.0168001239796566!84676$GO:0005130!granulocyte colony-stimulating factor receptor binding!0.0168001239796566!1440$GO:0015755!fructose transport!0.0168001239796566!6518$GO:0022843!voltage-gated cation channel activity!0.0168001239796566!779;3767;6324;786$GO:0005622!intracellular!0.0168001239796566!53405;1917;6249;8844;3767;442721;4618;4604;167838;7352;84676;29765;221662;10579;54583;7135;6840;7273;5213;4734;8531;2273;5144;64328;5532;6261;4619;78986;23223;10290;4134;10345;23224;10324;23392;140461;57509;6710;84448;121512;844;3895;5588;22823;4703$GO:0006811!ion transport!0.0178833616688749!7352;53405;1144;779;3767;6261;6324;786;6575$GO:0009892!negative regulation of metabolic process!0.017984009377158!6840;4134;4618;8531;6710$GO:0008324!cation transmembrane transporter activity!0.0186624188117122!1144;779;3767;6261;6324;786;6575$GO:0048523!negative regulation of cellular process!0.0206785466930507!6840;4134;1917;4618;8531;6710;10290;57509$GO:0005891!voltage-gated calcium channel complex!0.0206785466930507!779;786$GO:0048513!organ development!0.0206785466930507!54583;10290;1440;6840;2273;4618;7273;4703$GO:0051015!actin filament binding!0.0225951056945113!6840;6710$GO:0005516!calmodulin binding!0.0242672502478497!5532;7273;4619$GO:0048519!negative regulation of biological process!0.0248333300298026!6840;4134;1917;4618;8531;6710;10290;57509$GO:0008064!regulation of actin polymerization and/or depolymerization!0.0277726489503542!6840;6710$GO:0004114!3',5'-cyclic-nucleotide phosphodiesterase activity!0.028561141721818!5144;5142$GO:0005927!muscle tendon junction!0.028561141721818!4892$GO:0008184!glycogen phosphorylase activity!0.028561141721818!5837$GO:0051371!muscle alpha-actinin binding!0.028561141721818!4892$GO:0005977!glycogen metabolic process!0.0297827758821279!5837;5213$GO:0004112!cyclic-nucleotide phosphodiesterase activity!0.0297827758821279!5144;5142$GO:0006073!glucan metabolic process!0.0307397024964582!5837;5213$GO:0022891!substrate-specific transmembrane transporter activity!0.0308174718294037!53405;779;6261;6324;6518;786;1144;3767;6575$GO:0006996!organelle organization and biogenesis!0.031183611676447!7352;84448;121512;6840;3895;4134;7273;4703;6710$GO:0006112!energy reserve metabolic process!0.0389703584237744!5837;5213$GO:0005218!intracellular ligand-gated calcium channel activity!0.0393269337737831!6261$GO:0005353!fructose transmembrane transporter activity!0.0393269337737831!6518$GO:0005219!ryanodine-sensitive calcium-release channel activity!0.0393269337737831!6261$GO:0005272!sodium channel activity!0.0402774717560184!779;6324$GO:0015075!ion transmembrane transporter activity!0.0411999819333484!53405;1144;779;3767;6261;6324;786;6575$GO:0006816!calcium ion transport!0.0416278925607318!779;6261;786$GO:0019992!diacylglycerol binding!0.0416278925607318!8844;5588$GO:0044260!cellular macromolecule metabolic process!0.0416278925607318!5532;1917;78986;208;10290;5837;8844;4134;51676;92591;51207;10324;23392;6710;140461;84676;6840;7273;4734;5213;5588$GO:0008154!actin polymerization and/or depolymerization!0.0434972830287973!6840;6710$GO:0042578!phosphoric ester hydrolase activity!0.0434972830287973!5532;78986;51207;5144;5142$GO:0022857!transmembrane transporter activity!0.0434972830287973!53405;779;6261;6324;6518;786;1144;3767;6575$GO:0008138!protein tyrosine/serine/threonine phosphatase activity!0.0443840293604972!78986;51207$GO:0033018!sarcoplasmic reticulum lumen!0.0443840293604972!844$GO:0032364!oxygen homeostasis!0.0443840293604972!54583$GO:0001892!embryonic placenta development!0.0443840293604972!54583$GO:0033483!gas homeostasis!0.0443840293604972!54583$GO:0006110!regulation of glycolysis!0.0443840293604972!5213$GO:0005315!inorganic phosphate transmembrane transporter activity!0.0443840293604972!6575$GO:0005955!calcineurin complex!0.0443840293604972!5532$GO:0030851!granulocyte differentiation!0.0443840293604972!1440$GO:0007525!somatic muscle development!0.0443840293604972!4703$GO:0043034!costamere!0.0443840293604972!6840$GO:0016068!type I hypersensitivity!0.0443840293604972!221662$GO:0005245!voltage-gated calcium channel activity!0.0467031129380266!779;786$GO:0006812!cation transport!0.0478529649024454!7352;779;3767;6261;6324;786$GO:0048856!anatomical structure development!0.0486770779119948!54583;10290;121512;1440;6840;7273;2273;4618;5588;4703

Revision as of 18:26, 12 September 2012


Full id: C72_skeletal_tongue_throat_heart_diaphragm_penis_left



Phase1 CAGE Peaks

Hg19::chr10:104535994..104536014,+p4@C10orf26
Hg19::chr10:104536050..104536059,+p18@C10orf26
Hg19::chr10:115423792..115423806,-p1@NRAP
Hg19::chr10:123778989..123779000,+p52@TACC2
Hg19::chr10:123954672..123954673,+p@chr10:123954672..123954673
+
Hg19::chr10:134649885..134649921,-p@chr10:134649885..134649921
-
Hg19::chr10:29918007..29918031,-p@chr10:29918007..29918031
-
Hg19::chr10:29923893..29923907,-p1@SVIL
Hg19::chr10:50507232..50507257,+p1@C10orf71
Hg19::chr10:50507262..50507282,+p3@C10orf71
Hg19::chr10:6557469..6557474,-p4@PRKCQ
Hg19::chr10:72141310..72141325,-p5@LRRC20
Hg19::chr10:75226182..75226220,-p3@PPP3CB
Hg19::chr10:76868808..76868825,-p5@DUSP13
Hg19::chr10:97037060..97037066,-p@chr10:97037060..97037066
-
Hg19::chr10:99127126..99127145,-p5@RRP12
Hg19::chr11:10920793..10920806,-p2@uc001mjn.1
Hg19::chr11:126077493..126077505,-p3@RPUSD4
Hg19::chr11:17410660..17410710,-p3@KCNJ11
Hg19::chr11:64514748..64514770,-p@chr11:64514748..64514770
-
Hg19::chr11:64518023..64518030,-p19@PYGM
Hg19::chr11:73720122..73720136,-p1@UCP3
Hg19::chr12:102020657..102020663,+p8@MYBPC1
Hg19::chr12:102057261..102057282,+p@chr12:102057261..102057282
+
Hg19::chr12:102079632..102079647,-p@chr12:102079632..102079647
-
Hg19::chr12:10870989..10871013,-p11@CSDA
Hg19::chr12:10871020..10871032,-p26@CSDA
Hg19::chr12:10871049..10871064,-p19@CSDA
Hg19::chr12:10871068..10871079,-p25@CSDA
Hg19::chr12:10875658..10875708,-p2@CSDA
Hg19::chr12:10875831..10876025,-p1@CSDA
Hg19::chr12:10876282..10876288,-p29@CSDA
Hg19::chr12:122884443..122884457,-p21@CLIP1
Hg19::chr12:122884464..122884467,-p38@CLIP1
Hg19::chr12:122884488..122884502,-p24@CLIP1
Hg19::chr12:122884508..122884523,-p15@CLIP1
Hg19::chr12:32654965..32654977,+p15@FGD4
Hg19::chr12:48516441..48516454,+p6@PFKM
Hg19::chr12:48545157..48545170,-p4@ASB8
Hg19::chr12:57115098..57115135,-p@chr12:57115098..57115135
-
Hg19::chr12:67751652..67751685,-p@chr12:67751652..67751685
-
Hg19::chr12:68494798..68494815,-p@chr12:68494798..68494815
-
Hg19::chr12:81101312..81101321,+p6@MYF6
Hg19::chr12:81101442..81101449,+p3@MYF6
Hg19::chr12:81101462..81101467,+p4@MYF6
Hg19::chr12:81101472..81101483,+p2@MYF6
Hg19::chr12:81101723..81101726,+p10@MYF6
Hg19::chr12:81101753..81101762,+p5@MYF6
Hg19::chr12:96408839..96408854,-p@chr12:96408839..96408854
-
Hg19::chr13:21289714..21289723,+p20@IL17D
Hg19::chr13:21289746..21289769,+p2@IL17D
Hg19::chr13:21387250..21387271,-p@chr13:21387250..21387271
-
Hg19::chr13:21395866..21395879,-p6@XPO4
Hg19::chr13:21395886..21395893,-p7@XPO4
Hg19::chr13:21401247..21401280,-p@chr13:21401247..21401280
-
Hg19::chr13:50961291..50961319,-p@chr13:50961291..50961319
-
Hg19::chr13:51101468..51101499,-p1@ENST00000428276
Hg19::chr14:24600714..24600729,+p3@FITM1
Hg19::chr14:56127960..56127979,+p23@KTN1
Hg19::chr14:56127989..56128008,+p19@KTN1
Hg19::chr14:64579805..64579812,+p@chr14:64579805..64579812
+
Hg19::chr14:64680854..64680891,+p2@SYNE2
Hg19::chr14:65289871..65289874,-p8@SPTB
Hg19::chr14:94430858..94430887,-p@chr14:94430858..94430887
-
Hg19::chr14:94442896..94442930,-p1@ASB2
Hg19::chr15:51058024..51058028,-p3@SPPL2A
Hg19::chr15:56209487..56209498,-p13@NEDD4
Hg19::chr15:99548751..99548758,-p5@PGPEP1L
Hg19::chr15:99548861..99548881,-p4@PGPEP1L
Hg19::chr16:7382840..7382860,+p3@RBFOX1
Hg19::chr17:10421962..10421969,-p2@MYH1
Hg19::chr17:25904420..25904463,+p3@KSR1
Hg19::chr17:33640586..33640597,+p@chr17:33640586..33640597
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Hg19::chr17:33640639..33640650,+p@chr17:33640639..33640650
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Hg19::chr17:37822491..37822502,-p@chr17:37822491..37822502
-
Hg19::chr17:38171959..38171970,+p6@CSF3
Hg19::chr17:42248036..42248054,+p2@ASB16
Hg19::chr17:55601633..55601643,+p@chr17:55601633..55601643
+
Hg19::chr17:65052469..65052491,+p6@CACNG1
Hg19::chr17:79792918..79792932,-p1@PPP1R27
Hg19::chr18:32487085..32487092,-p@chr18:32487085..32487092
-
Hg19::chr18:55922965..55922972,+p@chr18:55922965..55922972
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Hg19::chr19:14673282..14673294,+p14@TECR
Hg19::chr19:35521675..35521684,+p8@SCN1B
Hg19::chr19:38664309..38664322,+p@chr19:38664309..38664322
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Hg19::chr19:38924316..38924346,+p1@RYR1
Hg19::chr19:38932979..38933014,+p@chr19:38932979..38933014
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Hg19::chr19:40324017..40324030,-p@chr19:40324017..40324030
-
Hg19::chr19:40324034..40324066,-p@chr19:40324034..40324066
-
Hg19::chr19:40771997..40772002,-p25@AKT2
Hg19::chr19:4791722..4791764,+p1@FEM1A
Hg19::chr19:4793532..4793537,+p5@FEM1A
Hg19::chr19:50996327..50996328,-p@chr19:50996327..50996328
-
Hg19::chr19:55660468..55660472,-p@chr19:55660468..55660472
-
Hg19::chr1:115238140..115238153,-p2@AMPD1
Hg19::chr1:115238154..115238174,-p1@AMPD1
Hg19::chr1:118363660..118363674,-p@chr1:118363660..118363674
-
Hg19::chr1:151148497..151148512,-p2@TMOD4
Hg19::chr1:160160421..160160424,+p7@CASQ1
Hg19::chr1:160160431..160160442,+p5@CASQ1
Hg19::chr1:160171297..160171308,+p@chr1:160171297..160171308
+
Hg19::chr1:201081548..201081569,-p1@CACNA1S
Hg19::chr1:201081583..201081592,-p2@CACNA1S
Hg19::chr1:201378284..201378297,-p@chr1:201378284..201378297
-
Hg19::chr1:201390850..201390865,-p1@TNNI1
Hg19::chr1:201391293..201391300,-p6@TNNI1
Hg19::chr1:225712376..225712390,-p@chr1:225712376..225712390
-
Hg19::chr1:225888421..225888432,+p2@ENST00000448264
p2@uc001hpe.1
Hg19::chr1:229568418..229568436,-p@chr1:229568418..229568436
-
Hg19::chr1:229568439..229568458,-p@chr1:229568439..229568458
-
Hg19::chr1:231557409..231557418,-p23@EGLN1
Hg19::chr1:231558425..231558448,-p@chr1:231558425..231558448
-
Hg19::chr1:231558449..231558469,-p@chr1:231558449..231558469
-
Hg19::chr1:231558471..231558476,-p@chr1:231558471..231558476
-
Hg19::chr1:231558483..231558511,-p@chr1:231558483..231558511
-
Hg19::chr1:24422589..24422609,+p@chr1:24422589..24422609
+
Hg19::chr1:26394114..26394130,-p1@TRIM63
Hg19::chr1:44186258..44186263,-p@chr1:44186258..44186263
-
Hg19::chr1:64013603..64013614,+p6@EFCAB7
Hg19::chr1:64013668..64013680,+p7@EFCAB7
Hg19::chr1:64013703..64013712,+p11@EFCAB7
Hg19::chr1:66796212..66796231,+p29@PDE4B
Hg19::chr1:9129853..9129865,-p18@SLC2A5
Hg19::chr1:93586380..93586411,+p8@MTF2
Hg19::chr20:20057067..20057076,-p1@LOC643659
Hg19::chr20:20069786..20069797,-p@chr20:20069786..20069797
-
Hg19::chr20:36152822..36152833,-p14@BLCAP
Hg19::chr20:36152914..36152926,-p8@BLCAP
Hg19::chr20:62124546..62124576,-p@chr20:62124546..62124576
-
Hg19::chr20:62129163..62129193,-p5@EEF1A2
Hg19::chr21:47769234..47769239,+p@chr21:47769234..47769239
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Hg19::chr22:25507371..25507375,+p@chr22:25507371..25507375
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Hg19::chr22:25508672..25508687,-p1@LOC100128531
Hg19::chr22:28193943..28193956,-p@chr22:28193943..28193956
-
Hg19::chr2:141004685..141004710,-p@chr2:141004685..141004710
-
Hg19::chr2:152381100..152381108,-p@chr2:152381100..152381108
-
Hg19::chr2:152383493..152383501,-p@chr2:152383493..152383501
-
Hg19::chr2:152393686..152393693,-p@chr2:152393686..152393693
-
Hg19::chr2:152432736..152432741,-p@chr2:152432736..152432741
-
Hg19::chr2:152470910..152470923,-p@chr2:152470910..152470923
-
Hg19::chr2:152527650..152527659,-p20@NEB
Hg19::chr2:152590465..152590472,-p@chr2:152590465..152590472
-
Hg19::chr2:152590502..152590507,-p@chr2:152590502..152590507
-
Hg19::chr2:168043855..168043866,+p2@XIRP2
Hg19::chr2:168043874..168043891,+p1@XIRP2
Hg19::chr2:168099250..168099268,+p11@XIRP2
Hg19::chr2:168102459..168102468,+p73@XIRP2
Hg19::chr2:168106863..168106864,+p99@XIRP2
Hg19::chr2:170366203..170366225,+p1@KBTBD10
Hg19::chr2:170370682..170370697,+p4@KBTBD10
Hg19::chr2:170374754..170374760,+p@chr2:170374754..170374760
+
Hg19::chr2:179128213..179128216,+p@chr2:179128213..179128216
+
Hg19::chr2:179396338..179396348,-p@chr2:179396338..179396348
-
Hg19::chr2:179401894..179401905,-p@chr2:179401894..179401905
-
Hg19::chr2:179441728..179441742,-p@chr2:179441728..179441742
-
Hg19::chr2:179444787..179444797,-p@chr2:179444787..179444797
-
Hg19::chr2:179446736..179446745,-p119@TTN
Hg19::chr2:179457343..179457356,-p@chr2:179457343..179457356
-
Hg19::chr2:179469980..179469991,-p@chr2:179469980..179469991
-
Hg19::chr2:179659944..179659966,-p12@TTN
Hg19::chr2:179664253..179664278,-p@chr2:179664253..179664278
-
Hg19::chr2:179664332..179664350,-p@chr2:179664332..179664350
-
Hg19::chr2:179672142..179672157,-p1@TTN
Hg19::chr2:220299547..220299572,+p3@SPEG
Hg19::chr2:233390863..233390878,+p1@CHRND
Hg19::chr2:233393025..233393037,+p@chr2:233393025..233393037
+
Hg19::chr2:239047304..239047335,+p1@KLHL30
Hg19::chr2:239047337..239047362,+p2@KLHL30
Hg19::chr2:29398214..29398229,+p27@CLIP4
Hg19::chr3:10512714..10512741,-p@chr3:10512714..10512741
-
Hg19::chr3:119338227..119338252,+p@chr3:119338227..119338252
+
Hg19::chr3:119338393..119338397,+p@chr3:119338393..119338397
+
Hg19::chr3:141132014..141132021,+p@chr3:141132014..141132021
+
Hg19::chr3:141148377..141148401,+p@chr3:141148377..141148401
+
Hg19::chr3:155011483..155011495,-p1@LOC100507537
Hg19::chr3:155011771..155011808,-p1@ENST00000489090
Hg19::chr3:39230861..39230875,-p3@XIRP1
Hg19::chr3:39230927..39230934,-p25@XIRP1
Hg19::chr3:42084467..42084485,+p@chr3:42084467..42084485
+
Hg19::chr3:42084492..42084507,+p@chr3:42084492..42084507
+
Hg19::chr3:46607722..46607747,-p2@LRRC2
Hg19::chr3:48057857..48057863,-p56@MAP4
Hg19::chr3:48057877..48057888,-p37@MAP4
Hg19::chr3:48972313..48972330,+p@chr3:48972313..48972330
+
Hg19::chr3:5024621..5024658,+p@chr3:5024621..5024658
+
Hg19::chr3:52485802..52485823,+p@chr3:52485802..52485823
+
Hg19::chr3:69168368..69168389,-p@chr3:69168368..69168389
-
Hg19::chr3:69168395..69168418,-p@chr3:69168395..69168418
-
Hg19::chr3:69168465..69168472,-p@chr3:69168465..69168472
-
Hg19::chr3:99833172..99833179,-p24@FILIP1L
Hg19::chr4:100575726..100575740,-p@chr4:100575726..100575740
-
Hg19::chr4:186434325..186434339,-p@chr4:186434325..186434339
-
Hg19::chr4:186434340..186434350,-p@chr4:186434340..186434350
-
Hg19::chr4:186499610..186499623,-p@chr4:186499610..186499623
-
Hg19::chr4:44653613..44653624,-p5@YIPF7
Hg19::chr4:44653636..44653647,-p4@YIPF7
Hg19::chr4:8129363..8129374,-p4@ABLIM2
Hg19::chr4:8129425..8129427,-p19@ABLIM2
Hg19::chr5:138730817..138730838,-p2@C5orf65
Hg19::chr5:145363278..145363284,+p@chr5:145363278..145363284
+
Hg19::chr5:150027785..150027800,+p4@AB384087
Hg19::chr5:150727066..150727082,-p2@SLC36A2
Hg19::chr5:16508944..16508960,-p5@FAM134B
Hg19::chr5:58652758..58652767,-p52@PDE4D
Hg19::chr5:58652888..58652893,-p73@PDE4D
Hg19::chr5:79026427..79026439,+p@chr5:79026427..79026439
+
Hg19::chr5:95174061..95174068,+p@chr5:95174061..95174068
+
Hg19::chr5:95179965..95179971,+p@chr5:95179965..95179971
+
Hg19::chr5:95179988..95179991,+p@chr5:95179988..95179991
+
Hg19::chr5:95180071..95180077,+p@chr5:95180071..95180077
+
Hg19::chr5:95180155..95180172,+p@chr5:95180155..95180172
+
Hg19::chr6:118985968..118985983,+p@chr6:118985968..118985983
+
Hg19::chr6:123958371..123958380,-p12@TRDN
Hg19::chr6:125535391..125535409,+p@chr6:125535391..125535409
+
Hg19::chr6:139613079..139613086,-p5@TXLNB
Hg19::chr6:139613101..139613118,-p2@TXLNB
Hg19::chr6:17280583..17280593,+p@chr6:17280583..17280593
+
Hg19::chr6:17280605..17280637,+p@chr6:17280605..17280637
+
Hg19::chr6:17280912..17280921,+p@chr6:17280912..17280921
+
Hg19::chr6:17290080..17290094,+p8@RBM24
Hg19::chr6:17290247..17290256,+p18@RBM24
Hg19::chr6:45983517..45983534,-p4@CLIC5
Hg19::chr6:45983549..45983578,-p2@CLIC5
Hg19::chr6:89856542..89856550,-p@chr6:89856542..89856550
-
Hg19::chr6:89856579..89856590,-p@chr6:89856579..89856590
-
Hg19::chr6:89856603..89856608,-p@chr6:89856603..89856608
-
Hg19::chr7:101944503..101944523,+p@chr7:101944503..101944523
+
Hg19::chr7:123295911..123295926,+p1@LMOD2
Hg19::chr7:50713346..50713354,-p@chr7:50713346..50713354
-
Hg19::chr7:7728987..7728990,+p@chr7:7728987..7728990
+
Hg19::chr8:124033810..124033819,-p@chr8:124033810..124033819
-
Hg19::chr8:124665857..124665868,-p@chr8:124665857..124665868
-
Hg19::chr8:124665891..124665894,-p@chr8:124665891..124665894
-
Hg19::chr8:124665957..124665968,-p@chr8:124665957..124665968
-
Hg19::chr8:124665971..124665974,-p@chr8:124665971..124665974
-
Hg19::chr8:17611435..17611446,-p41@MTUS1
Hg19::chr8:22785524..22785532,-p5@PEBP4
Hg19::chr8:33455219..33455228,-p9@DUSP26
Hg19::chr8:33457258..33457299,-p2@DUSP26
Hg19::chr8:42358586..42358595,-p21@SLC20A2
Hg19::chr8:48566633..48566645,+p17@KIAA0146
Hg19::chr8:48566659..48566670,+p16@KIAA0146
Hg19::chr8:49984690..49984720,+p3@C8orf22
Hg19::chr8:49984894..49984911,+p1@C8orf22
Hg19::chr9:103340319..103340320,+p7@MURC
Hg19::chr9:112182901..112182913,-p@chr9:112182901..112182913
-
Hg19::chr9:112183748..112183770,-p@chr9:112183748..112183770
-
Hg19::chr9:114246121..114246166,-p4@KIAA0368
Hg19::chrX:135278908..135278922,+p39@FHL1
Hg19::chrX:135279051..135279063,+p29@FHL1
Hg19::chrX:135289300..135289316,+p20@FHL1
Hg19::chrX:150041491..150041517,-p@chrX:150041491..150041517
-


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

p.valueFDRnGenesnPathwayName
6.10106398273766e-060.00386197350107294439Striated Muscle Contraction (Wikipathways):WP383
1.53553120835892e-050.00485995627445598449Muscle contraction (Reactome):REACT_17044



Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0006936muscle contraction4.71780622765726e-13
GO:0003012muscle system process4.71780622765726e-13
GO:0008092cytoskeletal protein binding4.80348745343815e-10
GO:0005856cytoskeleton1.10525164910753e-08
GO:0043292contractile fiber1.10525164910753e-08
GO:0003779actin binding1.59181340812528e-08
GO:0030016myofibril1.52750872858223e-07
GO:0044449contractile fiber part2.88089018463705e-07
GO:0005737cytoplasm3.19969802893113e-07
GO:0015629actin cytoskeleton9.28343023555808e-07
GO:0006941striated muscle contraction9.60050066496648e-07
GO:0043228non-membrane-bound organelle1.11647385590458e-06
GO:0043232intracellular non-membrane-bound organelle1.11647385590458e-06
GO:0030017sarcomere2.91006654844817e-06
GO:0044444cytoplasmic part1.59373741575407e-05
GO:0044430cytoskeletal part2.10350400668807e-05
GO:0007517muscle development7.39952479970909e-05
GO:0005515protein binding0.000123889876503251
GO:0032501multicellular organismal process0.000132708827171224
GO:0005626insoluble fraction0.000348801263931253
GO:0005523tropomyosin binding0.00038696732543958
GO:0051393alpha-actinin binding0.000415003140747196
GO:0003008system process0.000562331685675669
GO:0000267cell fraction0.000574835885879634
GO:0042805actinin binding0.00121400091885135
GO:0051128regulation of cellular component organization and biogenesis0.00164998697279683
GO:00041153',5'-cyclic-AMP phosphodiesterase activity0.00219001172961378
GO:0015270dihydropyridine-sensitive calcium channel activity0.00219001172961378
GO:0044424intracellular part0.00219001172961378
GO:0022836gated channel activity0.00219001172961378
GO:0008307structural constituent of muscle0.00219001172961378
GO:0007010cytoskeleton organization and biogenesis0.00219001172961378
GO:0015630microtubule cytoskeleton0.00237390257288476
GO:0051261protein depolymerization0.00255112441499983
GO:0030832regulation of actin filament length0.00255112441499983
GO:0032535regulation of cellular component size0.00257385019430711
GO:0032956regulation of actin cytoskeleton organization and biogenesis0.00257385019430711
GO:0005813centrosome0.00302637363172356
GO:0030036actin cytoskeleton organization and biogenesis0.00322034012142042
GO:0051129negative regulation of cellular component organization and biogenesis0.00322034012142042
GO:0043687post-translational protein modification0.00364982554883671
GO:0030029actin filament-based process0.00364982554883671
GO:0033043regulation of organelle organization and biogenesis0.00364982554883671
GO:0051493regulation of cytoskeleton organization and biogenesis0.00364982554883671
GO:0043412biopolymer modification0.00397619239306852
GO:0005261cation channel activity0.0040325499629083
GO:0005815microtubule organizing center0.0040325499629083
GO:0005790smooth endoplasmic reticulum0.00413319883702199
GO:0030018Z disc0.00545874206205575
GO:0007519skeletal muscle development0.00545874206205575
GO:0043229intracellular organelle0.00667615324188191
GO:0032982myosin filament0.00667615324188191
GO:0005863striated muscle thick filament0.00667615324188191
GO:0043226organelle0.00667615324188191
GO:0031674I band0.00729955721247181
GO:0005216ion channel activity0.00729955721247181
GO:0005624membrane fraction0.00729955721247181
GO:0022832voltage-gated channel activity0.00729955721247181
GO:0005244voltage-gated ion channel activity0.00729955721247181
GO:0022838substrate specific channel activity0.00738676379197793
GO:0046873metal ion transmembrane transporter activity0.00757041830826794
GO:0022803passive transmembrane transporter activity0.00759204471381507
GO:0015267channel activity0.00759204471381507
GO:0006464protein modification process0.00761312902011161
GO:0014706striated muscle development0.00923653099126956
GO:0051693actin filament capping0.00923653099126956
GO:0051016barbed-end actin filament capping0.00923653099126956
GO:0065008regulation of biological quality0.00923653099126956
GO:0030835negative regulation of actin filament depolymerization0.00978453731110029
GO:0005248voltage-gated sodium channel activity0.00978453731110029
GO:0030834regulation of actin filament depolymerization0.0102162713259087
GO:0030042actin filament depolymerization0.0102162713259087
GO:0043161proteasomal ubiquitin-dependent protein catabolic process0.0102162713259087
GO:0006512ubiquitin cycle0.0102162713259087
GO:0005859muscle myosin complex0.0115045985346233
GO:0016528sarcoplasm0.0115045985346233
GO:0016529sarcoplasmic reticulum0.0115045985346233
GO:0016460myosin II complex0.0122866854236638
GO:0051248negative regulation of protein metabolic process0.0124175603495476
GO:0044446intracellular organelle part0.0131669436439726
GO:0044422organelle part0.0135033263070627
GO:0043234protein complex0.014746835800996
GO:0005262calcium channel activity0.0168001239796566
GO:0031432titin binding0.0168001239796566
GO:0005130granulocyte colony-stimulating factor receptor binding0.0168001239796566
GO:0015755fructose transport0.0168001239796566
GO:0022843voltage-gated cation channel activity0.0168001239796566
GO:0005622intracellular0.0168001239796566
GO:0006811ion transport0.0178833616688749
GO:0009892negative regulation of metabolic process0.017984009377158
GO:0008324cation transmembrane transporter activity0.0186624188117122
GO:0048523negative regulation of cellular process0.0206785466930507
GO:0005891voltage-gated calcium channel complex0.0206785466930507
GO:0048513organ development0.0206785466930507
GO:0051015actin filament binding0.0225951056945113
GO:0005516calmodulin binding0.0242672502478497
GO:0048519negative regulation of biological process0.0248333300298026
GO:0008064regulation of actin polymerization and/or depolymerization0.0277726489503542
GO:00041143',5'-cyclic-nucleotide phosphodiesterase activity0.028561141721818
GO:0005927muscle tendon junction0.028561141721818
GO:0008184glycogen phosphorylase activity0.028561141721818
GO:0051371muscle alpha-actinin binding0.028561141721818
GO:0005977glycogen metabolic process0.0297827758821279
GO:0004112cyclic-nucleotide phosphodiesterase activity0.0297827758821279
GO:0006073glucan metabolic process0.0307397024964582
GO:0022891substrate-specific transmembrane transporter activity0.0308174718294037
GO:0006996organelle organization and biogenesis0.031183611676447
GO:0006112energy reserve metabolic process0.0389703584237744
GO:0005218intracellular ligand-gated calcium channel activity0.0393269337737831
GO:0005353fructose transmembrane transporter activity0.0393269337737831
GO:0005219ryanodine-sensitive calcium-release channel activity0.0393269337737831
GO:0005272sodium channel activity0.0402774717560184
GO:0015075ion transmembrane transporter activity0.0411999819333484
GO:0006816calcium ion transport0.0416278925607318
GO:0019992diacylglycerol binding0.0416278925607318
GO:0044260cellular macromolecule metabolic process0.0416278925607318
GO:0008154actin polymerization and/or depolymerization0.0434972830287973
GO:0042578phosphoric ester hydrolase activity0.0434972830287973
GO:0022857transmembrane transporter activity0.0434972830287973
GO:0008138protein tyrosine/serine/threonine phosphatase activity0.0443840293604972
GO:0033018sarcoplasmic reticulum lumen0.0443840293604972
GO:0032364oxygen homeostasis0.0443840293604972
GO:0001892embryonic placenta development0.0443840293604972
GO:0033483gas homeostasis0.0443840293604972
GO:0006110regulation of glycolysis0.0443840293604972
GO:0005315inorganic phosphate transmembrane transporter activity0.0443840293604972
GO:0005955calcineurin complex0.0443840293604972
GO:0030851granulocyte differentiation0.0443840293604972
GO:0007525somatic muscle development0.0443840293604972
GO:0043034costamere0.0443840293604972
GO:0016068type I hypersensitivity0.0443840293604972
GO:0005245voltage-gated calcium channel activity0.0467031129380266
GO:0006812cation transport0.0478529649024454
GO:0048856anatomical structure development0.0486770779119948



Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br><br>uberon_data<br><br>

Uber Anatomy
Ontology termp-valuen
adult organism2.65e-47115
multi-cellular organism1.37e-19659
embryo1.31e-17612
embryonic structure1.40e-15605
developing anatomical structure1.40e-15605
germ layer2.59e-15604
embryonic tissue2.59e-15604
presumptive structure2.59e-15604
epiblast (generic)2.59e-15604
anatomical system1.44e-14625
anatomical group3.02e-14626
neural tube3.31e-1357
neural rod3.31e-1357
future spinal cord3.31e-1357
neural keel3.31e-1357
regional part of brain6.62e-1259
central nervous system2.42e-1182
anterior neural tube1.42e-1042
brain2.30e-1069
future brain2.30e-1069
organ2.58e-10511
regional part of forebrain3.89e-1041
forebrain3.89e-1041
future forebrain3.89e-1041
multi-tissue structure5.98e-10347
regional part of nervous system1.56e-0994
nervous system1.56e-0994
neural plate1.71e-0986
presumptive neural plate1.71e-0986
neurectoderm1.77e-0890
anatomical cluster8.04e-08286
anterior region of body1.78e-07129
craniocervical region1.78e-07129
gray matter1.96e-0734
brain grey matter1.96e-0734
telencephalon2.05e-0734
anatomical conduit2.07e-07241
regional part of telencephalon4.78e-0733
head6.16e-07123
cerebral hemisphere7.70e-0732


Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs



JASPAR motifs

Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}



ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data

(#promoters = Number of promoters in this coexpression cluster that have ChIP signal of the TF)

TF#promotersEnrichmentp-valueq-value
NFE2#477892.7463966239710.006205531471472340.0273875718960911



Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data

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